Click here to switch to the map view.

The map label for this gene is 167625196

Identifier: 167625196

GI number: 167625196

Start: 4003876

End: 4004604

Strand: Reverse

Name: 167625196

Synonym: Shal_3284

Alternate gene names: NA

Gene position: 4004604-4003876 (Counterclockwise)

Preceding gene: 167625197

Following gene: 167625194

Centisome position: 76.62

GC content: 42.66

Gene sequence:

>729_bases
ATGACAGATCTTGAGCAGCAAGTATTTACTCAAGTACGCGCAATTATCTGCAACGAAGAGCAGGTAATTGGTCGTAGAGG
GATCCTTATCCCATTGAAAAAGGCCATTATTGCAGACGGTGATATTCGTAACGTTATCGATATCGTTTCATCTGATCCGG
CTTTGTCTGCCCATCTGCTTTGGCGCAGCAACAGTGCTGATCACGCTACGCCGCAATCGAGTAAGAATCGCTCATTAAAA
GATGCTTTAGTGCGTTTAGGCCAGGTTAATATTTATCGCTATGCGTTTACTTTCTATCTGAAAGAGCGTTTAGACGAACT
GAATGAGCCCTATAAGAAGCTGGTTCATGGCTATTGGGCACTAACAGAAGCGATTGCTACCGATGCTGTCGATCAGCTGT
ACCAGATAGATAGTTTGCAAATTAGCCCAGATGAAGTGCAAACCTTGGCACTATTTAGTGTATTTGGTGACATTATTGCA
CTCACAGCATTTGCTTACTTGAACTCAGAACTTGAACAGGAGTATCCACTCAGCCTGCTAAAGTCTGTGATTGAAGATAA
ACAGCAAACCTTAACGCTGGAAGCGTTTGAATCATTAGGGCTAGATGATGATTTACGTGATGAGTTTTTAATCGCGCATA
ACTTGCGTCAAACGCATAATGCTAACTCTCCAGGTTTGGTATTAAGACGTGTTCTCGCTAAAAAAGGCCTGTTACTGAAG
CCGATATGA

Upstream 100 bases:

>100_bases
TCGCTTATATGGCTTGACCTTTGACGTCATTATGTGGGTTAATTTACACGGAATTAAGTGCACATATTTATTAAAAAAAA
TATAAGGTTTAACGTTTCGC

Downstream 100 bases:

>100_bases
ACTTTTAATGATAAAGCCTGCAATATGCAGGCTTTTTTGTATGCAACAGAAATCATTACGTAATAGATTGGTATCAGTTC
AATCTCTGCTTCGCTAAACC

Product: putative signal transduction protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 242; Mature: 241

Protein sequence:

>242_residues
MTDLEQQVFTQVRAIICNEEQVIGRRGILIPLKKAIIADGDIRNVIDIVSSDPALSAHLLWRSNSADHATPQSSKNRSLK
DALVRLGQVNIYRYAFTFYLKERLDELNEPYKKLVHGYWALTEAIATDAVDQLYQIDSLQISPDEVQTLALFSVFGDIIA
LTAFAYLNSELEQEYPLSLLKSVIEDKQQTLTLEAFESLGLDDDLRDEFLIAHNLRQTHNANSPGLVLRRVLAKKGLLLK
PI

Sequences:

>Translated_242_residues
MTDLEQQVFTQVRAIICNEEQVIGRRGILIPLKKAIIADGDIRNVIDIVSSDPALSAHLLWRSNSADHATPQSSKNRSLK
DALVRLGQVNIYRYAFTFYLKERLDELNEPYKKLVHGYWALTEAIATDAVDQLYQIDSLQISPDEVQTLALFSVFGDIIA
LTAFAYLNSELEQEYPLSLLKSVIEDKQQTLTLEAFESLGLDDDLRDEFLIAHNLRQTHNANSPGLVLRRVLAKKGLLLK
PI
>Mature_241_residues
TDLEQQVFTQVRAIICNEEQVIGRRGILIPLKKAIIADGDIRNVIDIVSSDPALSAHLLWRSNSADHATPQSSKNRSLKD
ALVRLGQVNIYRYAFTFYLKERLDELNEPYKKLVHGYWALTEAIATDAVDQLYQIDSLQISPDEVQTLALFSVFGDIIAL
TAFAYLNSELEQEYPLSLLKSVIEDKQQTLTLEAFESLGLDDDLRDEFLIAHNLRQTHNANSPGLVLRRVLAKKGLLLKP
I

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27319; Mature: 27187

Theoretical pI: Translated: 4.98; Mature: 4.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDLEQQVFTQVRAIICNEEQVIGRRGILIPLKKAIIADGDIRNVIDIVSSDPALSAHLL
CCCHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHCCCCCCEEEEE
WRSNSADHATPQSSKNRSLKDALVRLGQVNIYRYAFTFYLKERLDELNEPYKKLVHGYWA
EECCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTEAIATDAVDQLYQIDSLQISPDEVQTLALFSVFGDIIALTAFAYLNSELEQEYPLSLL
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
KSVIEDKQQTLTLEAFESLGLDDDLRDEFLIAHNLRQTHNANSPGLVLRRVLAKKGLLLK
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCC
PI
CC
>Mature Secondary Structure 
TDLEQQVFTQVRAIICNEEQVIGRRGILIPLKKAIIADGDIRNVIDIVSSDPALSAHLL
CCHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHCCCCCCEEEEE
WRSNSADHATPQSSKNRSLKDALVRLGQVNIYRYAFTFYLKERLDELNEPYKKLVHGYWA
EECCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTEAIATDAVDQLYQIDSLQISPDEVQTLALFSVFGDIIALTAFAYLNSELEQEYPLSLL
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
KSVIEDKQQTLTLEAFESLGLDDDLRDEFLIAHNLRQTHNANSPGLVLRRVLAKKGLLLK
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCC
PI
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA