Click here to switch to the map view.

The map label for this gene is 167625194

Identifier: 167625194

GI number: 167625194

Start: 4002041

End: 4002391

Strand: Reverse

Name: 167625194

Synonym: Shal_3282

Alternate gene names: NA

Gene position: 4002391-4002041 (Counterclockwise)

Preceding gene: 167625196

Following gene: 167625193

Centisome position: 76.57

GC content: 47.58

Gene sequence:

>351_bases
ATGGTTTTTACCATCATGGTGCTGCTGTGCTTGGCTCAAAATAGTGGGATATTTAGTGCCTTTAATCAATTGAGTGCCAG
CTCGATTTCACAAGCGAGTGAGAGCGCCATTGGCCTTAACAGCGATTCAACTGATAGCAAGCTCAAGGACGCAGAGTTTA
GCCAATGTGAACTATCGGAAAAGTCTTTAAGGGTTTGTCTCGACGAGCCGCCTGTGATGCCGTTATTGGTGTTACTGTTT
ATCTTCCCCTTTATCTCGCCAGCATCGCGATTGCTGCAAAGGGCACTCGATGTGCCTGTGCTACCAAGGCCGCGGCGAAT
ACACCTCTCTTTCTGCCGATTTCAAGAATAA

Upstream 100 bases:

>100_bases
AAACATAGTTTAGATAGCATGTAGCCTAGTTTTTAGGTTTGCACCGGAGTTTATTATCTCGTATTTGAGTTTTCACAAAA
CAGCGAAACCTTGGACTATT

Downstream 100 bases:

>100_bases
ATACGATTAATCTAGCTTCAAATGAGCTAGTGATAACTGTACTTGAATTTGCTTGTTTTAGGCTAAAGTAACGCTAATCT
GCTGTTATTTTGTTTAATAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 116; Mature: 116

Protein sequence:

>116_residues
MVFTIMVLLCLAQNSGIFSAFNQLSASSISQASESAIGLNSDSTDSKLKDAEFSQCELSEKSLRVCLDEPPVMPLLVLLF
IFPFISPASRLLQRALDVPVLPRPRRIHLSFCRFQE

Sequences:

>Translated_116_residues
MVFTIMVLLCLAQNSGIFSAFNQLSASSISQASESAIGLNSDSTDSKLKDAEFSQCELSEKSLRVCLDEPPVMPLLVLLF
IFPFISPASRLLQRALDVPVLPRPRRIHLSFCRFQE
>Mature_116_residues
MVFTIMVLLCLAQNSGIFSAFNQLSASSISQASESAIGLNSDSTDSKLKDAEFSQCELSEKSLRVCLDEPPVMPLLVLLF
IFPFISPASRLLQRALDVPVLPRPRRIHLSFCRFQE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12890; Mature: 12890

Theoretical pI: Translated: 5.82; Mature: 5.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVFTIMVLLCLAQNSGIFSAFNQLSASSISQASESAIGLNSDSTDSKLKDAEFSQCELSE
CHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCH
KSLRVCLDEPPVMPLLVLLFIFPFISPASRLLQRALDVPVLPRPRRIHLSFCRFQE
HHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCEEHHHHHCCCC
>Mature Secondary Structure
MVFTIMVLLCLAQNSGIFSAFNQLSASSISQASESAIGLNSDSTDSKLKDAEFSQCELSE
CHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCH
KSLRVCLDEPPVMPLLVLLFIFPFISPASRLLQRALDVPVLPRPRRIHLSFCRFQE
HHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCEEHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA