Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is 167625157

Identifier: 167625157

GI number: 167625157

Start: 3957211

End: 3957555

Strand: Reverse

Name: 167625157

Synonym: Shal_3245

Alternate gene names: NA

Gene position: 3957555-3957211 (Counterclockwise)

Preceding gene: 167625158

Following gene: 167625155

Centisome position: 75.71

GC content: 42.32

Gene sequence:

>345_bases
ATGGACATGGAGCAGAGCATCATGAAAAAACAATTAGCCGTTATCGCATTGGTTTCACTTAGCGTAGTTGGCTGTTCGAG
TTCTAATTATGAGAAAGAGCAAACGTCTGCGCCATATATTGGTGAAGGTAACAAGGGGTATGAGAGCCTGTATCACTATG
GCTATTATCGCGGCTGTAAGAATGCTTATGTAATCAAGCTGCAAAAAACAGAATTATATGATTCGGTAAAAAAAGATACT
GCACTAGATGGGCTAGATCGTTTTGACTCTGGCTGGGAGGCCGGACAGAAAGCCTGTGAAGATGGTGTGCCTCGCTCTAT
GTATAACTTACAAGCGAATAAGTAG

Upstream 100 bases:

>100_bases
CAATATCTAACTTTTATCGATTGGGATTAGTGAATTGGTAATATTTGAGTAATGCACAATACTCAAGGTTAGCGTCGAAT
AGTGTATTTCGAATTTTGAT

Downstream 100 bases:

>100_bases
TGTGACTCGATAAGAAAACAGACTCAATTGAGTCTGTTTTCTTGGCTAAAGCCGAGAACCATTGAACTTAAATGGGCATT
ATTTTACGCAAAAGAGCTTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 114; Mature: 114

Protein sequence:

>114_residues
MDMEQSIMKKQLAVIALVSLSVVGCSSSNYEKEQTSAPYIGEGNKGYESLYHYGYYRGCKNAYVIKLQKTELYDSVKKDT
ALDGLDRFDSGWEAGQKACEDGVPRSMYNLQANK

Sequences:

>Translated_114_residues
MDMEQSIMKKQLAVIALVSLSVVGCSSSNYEKEQTSAPYIGEGNKGYESLYHYGYYRGCKNAYVIKLQKTELYDSVKKDT
ALDGLDRFDSGWEAGQKACEDGVPRSMYNLQANK
>Mature_114_residues
MDMEQSIMKKQLAVIALVSLSVVGCSSSNYEKEQTSAPYIGEGNKGYESLYHYGYYRGCKNAYVIKLQKTELYDSVKKDT
ALDGLDRFDSGWEAGQKACEDGVPRSMYNLQANK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12770; Mature: 12770

Theoretical pI: Translated: 5.89; Mature: 5.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDMEQSIMKKQLAVIALVSLSVVGCSSSNYEKEQTSAPYIGEGNKGYESLYHYGYYRGCK
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCCCCCCCCHHHHHHHHHHHCCCC
NAYVIKLQKTELYDSVKKDTALDGLDRFDSGWEAGQKACEDGVPRSMYNLQANK
CEEEEEEEHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHCCCCCC
>Mature Secondary Structure
MDMEQSIMKKQLAVIALVSLSVVGCSSSNYEKEQTSAPYIGEGNKGYESLYHYGYYRGCK
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCCCCCCCCHHHHHHHHHHHCCCC
NAYVIKLQKTELYDSVKKDTALDGLDRFDSGWEAGQKACEDGVPRSMYNLQANK
CEEEEEEEHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA