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The map label for this gene is rimP

Identifier: 167625061

GI number: 167625061

Start: 3845610

End: 3846065

Strand: Reverse

Name: rimP

Synonym: Shal_3149

Alternate gene names: 167625061

Gene position: 3846065-3845610 (Counterclockwise)

Preceding gene: 167625062

Following gene: 167625060

Centisome position: 73.58

GC content: 42.76

Gene sequence:

>456_bases
TTGGCTACATTAGAACGCAAACTGGTAGAGATGCTCAAAGCGCCAGTTGAAGCATTAGGCCATCAGCTTTGGGGTTTGGA
ATATATTCAAGCGGGTAAGCATTCTATCTTGCGTCTATATATAGACAATGAAAAGGGCATCTTCATTGAGGATTGCGCCG
AAGCAAGCCGCCAAGTAAGTGCTGTGCTAGATGTTGAAGACCCTATTACATCTGAATACACACTAGAAGTTTCTTCTCCG
GGTGTAGAAAGACTGCTATTCACTGCTGAGCAGTATAAGGCCTACATCGGTGAGACTGTAAAAGTACAATTAACGATGCC
TGTAGCGGGTAGTCGTAATTTAAAAGGCACCGTTACTGGCGTTGATGGGCAAATGCTCAATCTGTCGGTAGATGGAAATG
AACTTATTGTTGCTTTGGATAATATCCGTAAAGGCAACTTAATCGCTAAGTTTTGA

Upstream 100 bases:

>100_bases
TCATTACGGGGTTTTTTGTTATCTGCAACTTATAAAACTGTCACTCAAGGTGACGTGTACTGGGGCTATTAGGCCCTTTT
TTGTTTTTCTGGGGGTAACC

Downstream 100 bases:

>100_bases
TGAATTCAAGGTGAACGAGGCAAGACAATGAATAAAGAGATTCTGCTAGTCGCTGAGGCGGTTTCAAACGAGAAAGGTGT
ACCGCGCGAAAAGATTTTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 151; Mature: 150

Protein sequence:

>151_residues
MATLERKLVEMLKAPVEALGHQLWGLEYIQAGKHSILRLYIDNEKGIFIEDCAEASRQVSAVLDVEDPITSEYTLEVSSP
GVERLLFTAEQYKAYIGETVKVQLTMPVAGSRNLKGTVTGVDGQMLNLSVDGNELIVALDNIRKGNLIAKF

Sequences:

>Translated_151_residues
MATLERKLVEMLKAPVEALGHQLWGLEYIQAGKHSILRLYIDNEKGIFIEDCAEASRQVSAVLDVEDPITSEYTLEVSSP
GVERLLFTAEQYKAYIGETVKVQLTMPVAGSRNLKGTVTGVDGQMLNLSVDGNELIVALDNIRKGNLIAKF
>Mature_150_residues
ATLERKLVEMLKAPVEALGHQLWGLEYIQAGKHSILRLYIDNEKGIFIEDCAEASRQVSAVLDVEDPITSEYTLEVSSPG
VERLLFTAEQYKAYIGETVKVQLTMPVAGSRNLKGTVTGVDGQMLNLSVDGNELIVALDNIRKGNLIAKF

Specific function: Required for maturation of 30S ribosomal subunits

COG id: COG0779

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rimP family

Homologues:

Organism=Escherichia coli, GI226510978, Length=151, Percent_Identity=54.9668874172185, Blast_Score=173, Evalue=5e-45,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RIMP_SHEHH (B0TQA4)

Other databases:

- EMBL:   CP000931
- RefSeq:   YP_001675355.1
- ProteinModelPortal:   B0TQA4
- SMR:   B0TQA4
- GeneID:   5904691
- GenomeReviews:   CP000931_GR
- KEGG:   shl:Shal_3149
- HOGENOM:   HBG668072
- OMA:   VMDVEDP
- ProtClustDB:   PRK00092
- BioCyc:   SHAL458817:SHAL_3149-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_01077
- InterPro:   IPR003728

Pfam domain/function: PF02576 DUF150

EC number: NA

Molecular weight: Translated: 16622; Mature: 16491

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATLERKLVEMLKAPVEALGHQLWGLEYIQAGKHSILRLYIDNEKGIFIEDCAEASRQVS
CCCHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCEEEEEEEECCCCEEEHHHHHHHHHEE
AVLDVEDPITSEYTLEVSSPGVERLLFTAEQYKAYIGETVKVQLTMPVAGSRNLKGTVTG
EEEECCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCEEEEE
VDGQMLNLSVDGNELIVALDNIRKGNLIAKF
CCCEEEEEEECCCEEEEEECCCCCCCEEECC
>Mature Secondary Structure 
ATLERKLVEMLKAPVEALGHQLWGLEYIQAGKHSILRLYIDNEKGIFIEDCAEASRQVS
CCHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCEEEEEEEECCCCEEEHHHHHHHHHEE
AVLDVEDPITSEYTLEVSSPGVERLLFTAEQYKAYIGETVKVQLTMPVAGSRNLKGTVTG
EEEECCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCEEEEE
VDGQMLNLSVDGNELIVALDNIRKGNLIAKF
CCCEEEEEEECCCEEEEEECCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA