| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is secG [H]
Identifier: 167625062
GI number: 167625062
Start: 3846607
End: 3846942
Strand: Reverse
Name: secG [H]
Synonym: Shal_3150
Alternate gene names: 167625062
Gene position: 3846942-3846607 (Counterclockwise)
Preceding gene: 167625063
Following gene: 167625061
Centisome position: 73.6
GC content: 44.94
Gene sequence:
>336_bases ATGTATGAAGTTCTAATGATTATTTACTTGATGGTTGCGATTGGTCTAGTTGGCCTTATCCTTATCCAGCAAGGTAAAGG TGCTGACATGGGGGCCTCATTTGGCGCCGGTGCATCAGGTACTCTGTTCGGTTCATCTGGTTCTGGTAACTTTTTGACTC GTTCAACTGCGGTTCTAGCCGTAGCGTTTTTTGCACTAAGTCTTACTATCGGTAACTTAAGTGCGAATCACACTAAAGCT GAAGGTGCATGGGACGATTTAGGAAGCGACGCAGCGCAAGTTGTAGAGCAAGTTCAGCAAGAAGCTGAAAAGTCAGAAGA TAAGATCCCTGACTAA
Upstream 100 bases:
>100_bases TTGTTTGCTCAACCTGATGTAGACGGTGGATTGATTGGCGGTGTAAGCCTCAATGCTACCGAATTTCTCAGTTTATGTAC GATAGCGATGAGCGCATAAT
Downstream 100 bases:
>100_bases ATCATAAGTAAGCTTATGATGGTATCAATCCGCAACGATTGATACCGACTGTAAAACTGCTATTAACCTCTCAAAGTAGC AGTCAAGAAAAAACAGTCAA
Product: preprotein translocase subunit SecG
Products: NA
Alternate protein names: P12; Preprotein translocase band 1 subunit [H]
Number of amino acids: Translated: 111; Mature: 111
Protein sequence:
>111_residues MYEVLMIIYLMVAIGLVGLILIQQGKGADMGASFGAGASGTLFGSSGSGNFLTRSTAVLAVAFFALSLTIGNLSANHTKA EGAWDDLGSDAAQVVEQVQQEAEKSEDKIPD
Sequences:
>Translated_111_residues MYEVLMIIYLMVAIGLVGLILIQQGKGADMGASFGAGASGTLFGSSGSGNFLTRSTAVLAVAFFALSLTIGNLSANHTKA EGAWDDLGSDAAQVVEQVQQEAEKSEDKIPD >Mature_111_residues MYEVLMIIYLMVAIGLVGLILIQQGKGADMGASFGAGASGTLFGSSGSGNFLTRSTAVLAVAFFALSLTIGNLSANHTKA EGAWDDLGSDAAQVVEQVQQEAEKSEDKIPD
Specific function: Involved in protein export. Participates in an early event of protein translocation [H]
COG id: COG1314
COG function: function code U; Preprotein translocase subunit SecG
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the secG family [H]
Homologues:
Organism=Escherichia coli, GI1789565, Length=112, Percent_Identity=58.9285714285714, Blast_Score=132, Evalue=4e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004692 [H]
Pfam domain/function: PF03840 SecG [H]
EC number: NA
Molecular weight: Translated: 11455; Mature: 11455
Theoretical pI: Translated: 4.04; Mature: 4.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYEVLMIIYLMVAIGLVGLILIQQGKGADMGASFGAGASGTLFGSSGSGNFLTRSTAVLA CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHH VAFFALSLTIGNLSANHTKAEGAWDDLGSDAAQVVEQVQQEAEKSEDKIPD HHHHHHHHHHCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MYEVLMIIYLMVAIGLVGLILIQQGKGADMGASFGAGASGTLFGSSGSGNFLTRSTAVLA CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHH VAFFALSLTIGNLSANHTKAEGAWDDLGSDAAQVVEQVQQEAEKSEDKIPD HHHHHHHHHHCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]