Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is 167625042

Identifier: 167625042

GI number: 167625042

Start: 3819844

End: 3820752

Strand: Reverse

Name: 167625042

Synonym: Shal_3130

Alternate gene names: NA

Gene position: 3820752-3819844 (Counterclockwise)

Preceding gene: 167625043

Following gene: 167625040

Centisome position: 73.1

GC content: 48.29

Gene sequence:

>909_bases
TTGAATATTCAGCAAAAATCCCTCTACGTTCCCTACCTGCATGGTCATCTGCATTTACGGCAGATCACGCCTGTCCAAGC
GGATATGAGTAAGCCGCCTGTTTTAATGCTTCATGGCGCCATGTCAAACGGCCGGGTTTTTTACAGTGATTCAGGTAAGG
GACTCGGTTGCTACTTAGCCGACTCCGGCGTGGTGGTTTATGTACTCGACACTCAAGGGCGCGGTCTCAGTGAGCCAAAG
CTTGCTCGTGGATTTACAGCGGGTCAGGGTGAAGTGATTAGAGAGCAGTTACCACTAATTCAGCAATATATTCTATCACT
TCACCCTAAAGCTAAGCGCGTGCATTGGTGTGCTCACTCCTGGGGCGGAGTGTTGATGGCCAGTGCGATTGCTCGCTATG
AAAATCTGCAGCGGTCGGTAGCTTCACTGGTGACTTTTGGCAGTAAGCGCCGTATCGAGATTAAGTCAGTTAAAAAGTGG
TTCACGGTCGATCTTATCTGGAATAAGGTCGCACCGATGATCGCTTGGCGTAGTGGTTATCTGCCCGCAGATAAACTGAG
AATAGGTATGGATAATGAGTCTCGTGCATCATTACGTCAGAGTATTGAATGGGTGCGGGGTAATTGGGTCGACGGTGATG
ATGGTTTCGACTATCAAATGGCTGCAAGGGATGCTAATTGGCCCCCATCTTGGTTTATTGCGGCACAAGGCGATACCGTG
TTAGGTAACCCAAGTGATGTGCAGCGAATGATTAAGGAGTGTCATATCAAGCGGGTAGATTACACCCTGCTATCAAAGAA
GCAGGGTTTTAAGCATGACTATGATCACGGCGGAATGCTGACTCACAAAGATGCGGTAAACGATCATTTCCCCCGAGTTA
GAGATTGGTACCACAACTTTAATGGCTAA

Upstream 100 bases:

>100_bases
AGATTTATCAATCTGTTTTTTACTTTGGTTTAGAGTCTTTGCTCTTGTTTTTAGGCCGGTATTTCAGTAGGTTAGTTAAA
AAAATAAGAGTGTTGCCCCT

Downstream 100 bases:

>100_bases
CGGCGCTAAGGCTCGTCATTAAAGTTTTTAGAACGATTCATTCTTGCGGGCTGGACTCTTTTTTAGATCGCGTAATTACC
GTTAGCCATTTTACTCGCTA

Product: alpha/beta hydrolase fold protein

Products: NA

Alternate protein names: Esterase/Lipase; Esterase/Lipase/Thioesterase Family Protein; Alpha/Beta Fold Family Hydrolase; Lipase; Esterase; Alpha/Beta Hydrolase Fold Protein

Number of amino acids: Translated: 302; Mature: 302

Protein sequence:

>302_residues
MNIQQKSLYVPYLHGHLHLRQITPVQADMSKPPVLMLHGAMSNGRVFYSDSGKGLGCYLADSGVVVYVLDTQGRGLSEPK
LARGFTAGQGEVIREQLPLIQQYILSLHPKAKRVHWCAHSWGGVLMASAIARYENLQRSVASLVTFGSKRRIEIKSVKKW
FTVDLIWNKVAPMIAWRSGYLPADKLRIGMDNESRASLRQSIEWVRGNWVDGDDGFDYQMAARDANWPPSWFIAAQGDTV
LGNPSDVQRMIKECHIKRVDYTLLSKKQGFKHDYDHGGMLTHKDAVNDHFPRVRDWYHNFNG

Sequences:

>Translated_302_residues
MNIQQKSLYVPYLHGHLHLRQITPVQADMSKPPVLMLHGAMSNGRVFYSDSGKGLGCYLADSGVVVYVLDTQGRGLSEPK
LARGFTAGQGEVIREQLPLIQQYILSLHPKAKRVHWCAHSWGGVLMASAIARYENLQRSVASLVTFGSKRRIEIKSVKKW
FTVDLIWNKVAPMIAWRSGYLPADKLRIGMDNESRASLRQSIEWVRGNWVDGDDGFDYQMAARDANWPPSWFIAAQGDTV
LGNPSDVQRMIKECHIKRVDYTLLSKKQGFKHDYDHGGMLTHKDAVNDHFPRVRDWYHNFNG
>Mature_302_residues
MNIQQKSLYVPYLHGHLHLRQITPVQADMSKPPVLMLHGAMSNGRVFYSDSGKGLGCYLADSGVVVYVLDTQGRGLSEPK
LARGFTAGQGEVIREQLPLIQQYILSLHPKAKRVHWCAHSWGGVLMASAIARYENLQRSVASLVTFGSKRRIEIKSVKKW
FTVDLIWNKVAPMIAWRSGYLPADKLRIGMDNESRASLRQSIEWVRGNWVDGDDGFDYQMAARDANWPPSWFIAAQGDTV
LGNPSDVQRMIKECHIKRVDYTLLSKKQGFKHDYDHGGMLTHKDAVNDHFPRVRDWYHNFNG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34306; Mature: 34306

Theoretical pI: Translated: 9.85; Mature: 9.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIQQKSLYVPYLHGHLHLRQITPVQADMSKPPVLMLHGAMSNGRVFYSDSGKGLGCYLA
CCCCCCEEEEEEEECEEEEEEECCCCCCCCCCCEEEEECCCCCCEEEECCCCCCEEEEEE
DSGVVVYVLDTQGRGLSEPKLARGFTAGQGEVIREQLPLIQQYILSLHPKAKRVHWCAHS
CCCEEEEEEECCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHEEEHHHC
WGGVLMASAIARYENLQRSVASLVTFGSKRRIEIKSVKKWFTVDLIWNKVAPMIAWRSGY
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHEEHHHHHHHHHHHHHHCCCC
LPADKLRIGMDNESRASLRQSIEWVRGNWVDGDDGFDYQMAARDANWPPSWFIAAQGDTV
CCHHHEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCEEEEECCCEE
LGNPSDVQRMIKECHIKRVDYTLLSKKQGFKHDYDHGGMLTHKDAVNDHFPRVRDWYHNF
ECCHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHCC
NG
CC
>Mature Secondary Structure
MNIQQKSLYVPYLHGHLHLRQITPVQADMSKPPVLMLHGAMSNGRVFYSDSGKGLGCYLA
CCCCCCEEEEEEEECEEEEEEECCCCCCCCCCCEEEEECCCCCCEEEECCCCCCEEEEEE
DSGVVVYVLDTQGRGLSEPKLARGFTAGQGEVIREQLPLIQQYILSLHPKAKRVHWCAHS
CCCEEEEEEECCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHEEEHHHC
WGGVLMASAIARYENLQRSVASLVTFGSKRRIEIKSVKKWFTVDLIWNKVAPMIAWRSGY
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHEEHHHHHHHHHHHHHHCCCC
LPADKLRIGMDNESRASLRQSIEWVRGNWVDGDDGFDYQMAARDANWPPSWFIAAQGDTV
CCHHHEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCEEEEECCCEE
LGNPSDVQRMIKECHIKRVDYTLLSKKQGFKHDYDHGGMLTHKDAVNDHFPRVRDWYHNF
ECCHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHCC
NG
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA