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The map label for this gene is 167625034

Identifier: 167625034

GI number: 167625034

Start: 3809127

End: 3809579

Strand: Reverse

Name: 167625034

Synonym: Shal_3122

Alternate gene names: NA

Gene position: 3809579-3809127 (Counterclockwise)

Preceding gene: 167625036

Following gene: 167625032

Centisome position: 72.88

GC content: 45.03

Gene sequence:

>453_bases
ATGTCTTCAGTTAAAAGCGGCCTAAAAGCCATCGCACTCCTCGAGGCCACGAAAGGGCTAATATCTGTATTGGTTGTCTT
TGGGCTGCATAAACTCGCCGGGCAAGACATTCAACGAGTGGTTGAAGAGTTACTGAGTCATTCCCACTTAAACCCTGCAA
ATCATTTAGTTCAGGAGGCGATTACACAGGCCGGTAAGATAACAGAGGCGAATATTATGTTTGTGATAGCAGGCGCCTTA
CTCTACGCTGGTATACGTTTTATAGAAGCCTATGGCCTTTGGCACAGTTTAGTGTGGACCGAATGGTTTGCCTTATTAAG
TGGCGGGATCTACTTGCCATTTGAGGCGTATGAAATGTTCACCAAGCCGAGCTTATTAACGGCAGGGATATTAGTCATTA
ACCTCGTGGTTGTGGGTTATATGTATCGAGTTATCAAGCATAAAGGCTCTTGA

Upstream 100 bases:

>100_bases
CCGCCCCAATACCGAGCAAAATGGCGTAACATTAATAATAAGAATTATTTGTCACCATTGAGAGATTCGAGAATCTTCAT
TTCTCTCTAGAAAGGATCCC

Downstream 100 bases:

>100_bases
ATTGGTATGTTAAAGGCGGGTTCATCGTACTTAAAGCCTGATGCTCGTTGTTATCAACGTGCATTAGGGCTAATTTAGTA
ATGAGCTTATGAATTAACTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 150; Mature: 149

Protein sequence:

>150_residues
MSSVKSGLKAIALLEATKGLISVLVVFGLHKLAGQDIQRVVEELLSHSHLNPANHLVQEAITQAGKITEANIMFVIAGAL
LYAGIRFIEAYGLWHSLVWTEWFALLSGGIYLPFEAYEMFTKPSLLTAGILVINLVVVGYMYRVIKHKGS

Sequences:

>Translated_150_residues
MSSVKSGLKAIALLEATKGLISVLVVFGLHKLAGQDIQRVVEELLSHSHLNPANHLVQEAITQAGKITEANIMFVIAGAL
LYAGIRFIEAYGLWHSLVWTEWFALLSGGIYLPFEAYEMFTKPSLLTAGILVINLVVVGYMYRVIKHKGS
>Mature_149_residues
SSVKSGLKAIALLEATKGLISVLVVFGLHKLAGQDIQRVVEELLSHSHLNPANHLVQEAITQAGKITEANIMFVIAGALL
YAGIRFIEAYGLWHSLVWTEWFALLSGGIYLPFEAYEMFTKPSLLTAGILVINLVVVGYMYRVIKHKGS

Specific function: Unknown

COG id: COG3305

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16452; Mature: 16321

Theoretical pI: Translated: 8.83; Mature: 8.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSVKSGLKAIALLEATKGLISVLVVFGLHKLAGQDIQRVVEELLSHSHLNPANHLVQEA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
ITQAGKITEANIMFVIAGALLYAGIRFIEAYGLWHSLVWTEWFALLSGGIYLPFEAYEMF
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
TKPSLLTAGILVINLVVVGYMYRVIKHKGS
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SSVKSGLKAIALLEATKGLISVLVVFGLHKLAGQDIQRVVEELLSHSHLNPANHLVQEA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
ITQAGKITEANIMFVIAGALLYAGIRFIEAYGLWHSLVWTEWFALLSGGIYLPFEAYEMF
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
TKPSLLTAGILVINLVVVGYMYRVIKHKGS
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA