| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
Click here to switch to the map view.
The map label for this gene is yeiI [H]
Identifier: 167624954
GI number: 167624954
Start: 3708962
End: 3710053
Strand: Reverse
Name: yeiI [H]
Synonym: Shal_3041
Alternate gene names: 167624954
Gene position: 3710053-3708962 (Counterclockwise)
Preceding gene: 167624955
Following gene: 167624953
Centisome position: 70.98
GC content: 47.53
Gene sequence:
>1092_bases ATGACAGAACGCGAACTCGAGATACTAGCACTACTTAAACAAGACCCTTTGATCCCGCAGCAAAGTATTGCCGATCAACT TGGGATCAGTCGCTCCGCTGTGGCGGGTCATATTATGAATTTAACCCATAAAGGCGTGATTAAAGGTAAAGGCTATATTC TTGCCGAATCACGTTATGCCATCGTAATTGGTGGCGCTAACATGGATATTCTTGGCCGTCCTCTGCATACCCTACAAGTT GGCGACTCAAACCCGGGTAGTGTGACCTGCTCACCTGGTGGCGTGGGCCGAAATATTGCTGAAAACTTAGCAAGACTTGG CTCAGATACCCATCTGATTAGCGCACTAGGTAAAGATACCTATGGCCAGATGATCATGACTCAGTGTCAGCAGGCCGGTA TCGATATGAAGGCCTGTATTCATCTCGATGAGTTTGCAACTTCAACCTACCTATCTGTGCTCGATGGTGACAGCGATATG CATGTTGCCATTAATGATATGGCGATACTCGATAGACTCAGCGTCGCTGTGTTAAAGACCCATGAGGAAGTGCTGCGCCG GGCAGAGCTTATCATTGTCGATGCCAATCTATCGGCAGAGTCTCTAGAGTATCTACTTAGCAACTTCTCAGATAGACCTA TTTTCGTCGATACGGTTTCTTGTGCAAAAGCCAAGAAAATTAGGCCGTTCTTAAGCTCCGTCCACACCTTAAAACCCAAC CTTAAAGAAGCTGAGCAACTGTCAGGTATTAACATCAACAGCCACGAGCAGTTACCAGAGTTAGCTAACTGGTTCCATAG CCAAGGCGTGAAGCGCATCTTCTTAAGTCTAGGGTGTGATGGGGTGTTTTATAGCGATGAAGGCGTGCAAGCCTTAATCC CTGCGATGCAAGTTTCTATGGTCAATGCCAACGGCGCTGGCGATGCGTTTCTTGCTGGCCTCGCTCATGGCTGGATCCAA CAGTGGACCACCGAAGAGTCTACTCAATTTGCTATGGGAGCAGCGGTCGTTGCGCTGTCTCACTTAGCCACAATAAACCC TAATATGTCTGAAATTACCGTTAAGCGCGTTATCAAGGAGTCGTTATGTTAG
Upstream 100 bases:
>100_bases TTGATTACTCTGGTAATTAGGCATACCCTGAGTGCAAGTTTAAACAAAAGTTTGGTATCCAAACAAATGTTTGTTTGGCC GTGTCGACTGGATAATAACA
Downstream 100 bases:
>100_bases AGCAGTACCTAGATATTAATCCAGAAGTTGCAGCAGCATTAGCAGCAGGTAAGCCTGTGGTTGCATTGGAGTCGACCATC ATTTCTCACGGTATGCCTTA
Product: ribokinase-like domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 363; Mature: 362
Protein sequence:
>363_residues MTERELEILALLKQDPLIPQQSIADQLGISRSAVAGHIMNLTHKGVIKGKGYILAESRYAIVIGGANMDILGRPLHTLQV GDSNPGSVTCSPGGVGRNIAENLARLGSDTHLISALGKDTYGQMIMTQCQQAGIDMKACIHLDEFATSTYLSVLDGDSDM HVAINDMAILDRLSVAVLKTHEEVLRRAELIIVDANLSAESLEYLLSNFSDRPIFVDTVSCAKAKKIRPFLSSVHTLKPN LKEAEQLSGININSHEQLPELANWFHSQGVKRIFLSLGCDGVFYSDEGVQALIPAMQVSMVNANGAGDAFLAGLAHGWIQ QWTTEESTQFAMGAAVVALSHLATINPNMSEITVKRVIKESLC
Sequences:
>Translated_363_residues MTERELEILALLKQDPLIPQQSIADQLGISRSAVAGHIMNLTHKGVIKGKGYILAESRYAIVIGGANMDILGRPLHTLQV GDSNPGSVTCSPGGVGRNIAENLARLGSDTHLISALGKDTYGQMIMTQCQQAGIDMKACIHLDEFATSTYLSVLDGDSDM HVAINDMAILDRLSVAVLKTHEEVLRRAELIIVDANLSAESLEYLLSNFSDRPIFVDTVSCAKAKKIRPFLSSVHTLKPN LKEAEQLSGININSHEQLPELANWFHSQGVKRIFLSLGCDGVFYSDEGVQALIPAMQVSMVNANGAGDAFLAGLAHGWIQ QWTTEESTQFAMGAAVVALSHLATINPNMSEITVKRVIKESLC >Mature_362_residues TERELEILALLKQDPLIPQQSIADQLGISRSAVAGHIMNLTHKGVIKGKGYILAESRYAIVIGGANMDILGRPLHTLQVG DSNPGSVTCSPGGVGRNIAENLARLGSDTHLISALGKDTYGQMIMTQCQQAGIDMKACIHLDEFATSTYLSVLDGDSDMH VAINDMAILDRLSVAVLKTHEEVLRRAELIIVDANLSAESLEYLLSNFSDRPIFVDTVSCAKAKKIRPFLSSVHTLKPNL KEAEQLSGININSHEQLPELANWFHSQGVKRIFLSLGCDGVFYSDEGVQALIPAMQVSMVNANGAGDAFLAGLAHGWIQQ WTTEESTQFAMGAAVVALSHLATINPNMSEITVKRVIKESLC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the carbohydrate kinase pfkB family [H]
Homologues:
Organism=Escherichia coli, GI1788484, Length=351, Percent_Identity=43.019943019943, Blast_Score=287, Evalue=9e-79, Organism=Escherichia coli, GI1788491, Length=311, Percent_Identity=43.0868167202572, Blast_Score=268, Evalue=4e-73, Organism=Escherichia coli, GI87081971, Length=295, Percent_Identity=27.1186440677966, Blast_Score=82, Evalue=7e-17, Organism=Escherichia coli, GI1790193, Length=223, Percent_Identity=25.1121076233184, Blast_Score=72, Evalue=6e-14, Organism=Drosophila melanogaster, GI24580669, Length=288, Percent_Identity=28.125, Blast_Score=86, Evalue=5e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011611 - InterPro: IPR002173 - InterPro: IPR011991 [H]
Pfam domain/function: PF00294 PfkB [H]
EC number: NA
Molecular weight: Translated: 39231; Mature: 39099
Theoretical pI: Translated: 5.73; Mature: 5.73
Prosite motif: PS50956 HTH_ASNC_2 ; PS00583 PFKB_KINASES_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTERELEILALLKQDPLIPQQSIADQLGISRSAVAGHIMNLTHKGVIKGKGYILAESRYA CCCHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCEEECCCEEEECCCEE IVIGGANMDILGRPLHTLQVGDSNPGSVTCSPGGVGRNIAENLARLGSDTHLISALGKDT EEECCCCCCCCCCCEEEEEECCCCCCEEEECCCCCCHHHHHHHHHCCCCHHHHHHHCCCH YGQMIMTQCQQAGIDMKACIHLDEFATSTYLSVLDGDSDMHVAINDMAILDRLSVAVLKT HHHHHHHHHHHCCCCHHHHEEHHHHHHHHHHHEECCCCCCEEEEHHHHHHHHHHHHHHHH HEEVLRRAELIIVDANLSAESLEYLLSNFSDRPIFVDTVSCAKAKKIRPFLSSVHTLKPN HHHHHHHCEEEEEECCCCHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHCCCC LKEAEQLSGININSHEQLPELANWFHSQGVKRIFLSLGCDGVFYSDEGVQALIPAMQVSM HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHEEE VNANGAGDAFLAGLAHGWIQQWTTEESTQFAMGAAVVALSHLATINPNMSEITVKRVIKE EECCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH SLC HCC >Mature Secondary Structure TERELEILALLKQDPLIPQQSIADQLGISRSAVAGHIMNLTHKGVIKGKGYILAESRYA CCHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCEEECCCEEEECCCEE IVIGGANMDILGRPLHTLQVGDSNPGSVTCSPGGVGRNIAENLARLGSDTHLISALGKDT EEECCCCCCCCCCCEEEEEECCCCCCEEEECCCCCCHHHHHHHHHCCCCHHHHHHHCCCH YGQMIMTQCQQAGIDMKACIHLDEFATSTYLSVLDGDSDMHVAINDMAILDRLSVAVLKT HHHHHHHHHHHCCCCHHHHEEHHHHHHHHHHHEECCCCCCEEEEHHHHHHHHHHHHHHHH HEEVLRRAELIIVDANLSAESLEYLLSNFSDRPIFVDTVSCAKAKKIRPFLSSVHTLKPN HHHHHHHCEEEEEECCCCHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHCCCC LKEAEQLSGININSHEQLPELANWFHSQGVKRIFLSLGCDGVFYSDEGVQALIPAMQVSM HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHEEE VNANGAGDAFLAGLAHGWIQQWTTEESTQFAMGAAVVALSHLATINPNMSEITVKRVIKE EECCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH SLC HCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503; 2460435 [H]