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The map label for this gene is psuG [H]

Identifier: 167624953

GI number: 167624953

Start: 3708054

End: 3708968

Strand: Reverse

Name: psuG [H]

Synonym: Shal_3040

Alternate gene names: 167624953

Gene position: 3708968-3708054 (Counterclockwise)

Preceding gene: 167624954

Following gene: 167624951

Centisome position: 70.96

GC content: 46.99

Gene sequence:

>915_bases
ATGTTAGAGCAGTACCTAGATATTAATCCAGAAGTTGCAGCAGCATTAGCAGCAGGTAAGCCTGTGGTTGCATTGGAGTC
GACCATCATTTCTCACGGTATGCCTTATCCGCAAAACGTAGAAACGGCGCTTAAAGTTGAGCAGATCATTCGTGACAACG
GTGCTGTACCTGCAACTATCGCCATCTTGAAGGGCCGTTTAAAAGTGGGCATGACCCATGAAGAGATTGAGTACTTAGGT
AAAGCGGGTCTAGATGTGATTAAGACTAGCCGCCGCGATATTCCATTTATTGTTGCTAAGGGTGTTGACGGAGCAACAAC
GGTTGCATCGACTATGATTTTGGCACAGATGGCGGGCATTAAAGTGTTTGCAACTGGTGGCATTGGTGGCGTTCACCGCG
GCGCACAGCAGACTTTTGATATCTCTGCCGATCTTCAAGAGCTGGCGAATACCGACGTAGCAGTGGTTTGTGCTGGCGCT
AAATCAATCTTAGATATCGGTTTAACACTAGAGTACCTTGAAACTCAAGGTGTACCGGTTGTTGGTTATCAAACAAGTAC
TCTGCCTGCATTCTACACTCGTGAGAGTGAGTTTGGAGTCGATTATCAGCTCGATACACCAGCCCAAATTGCTGCGGCAA
TGAAGGCGAAGTGGGATATGGACTTGAAAGGCGGCTTAGTGATTGCTAATCCAATTCCAGAAGCGCATCAGCTAGACCGC
GCTATGATCGATCAAGTGATTGCTGATGCGGTTGCTGAAATGGACAGCAAAGGTATTTTTGGTAAGGCATCGACGCCATT
CCTACTGGCTAAAGTGGCTGAAACCACCAAAGGCGTGAGCTTGGCGGCAAACATCGAACTTGTGTTTAATAACGCAAAAC
TTGCGGCTAATATTGCGGTTGAATACGCTAAATAG

Upstream 100 bases:

>100_bases
AATTTGCTATGGGAGCAGCGGTCGTTGCGCTGTCTCACTTAGCCACAATAAACCCTAATATGTCTGAAATTACCGTTAAG
CGCGTTATCAAGGAGTCGTT

Downstream 100 bases:

>100_bases
TCCAAGATTCAAAGTAAATAAAAAGGCACCTTGCGGTGCCTTTTTTCATTTAAGCTCTTATTGAATCAATGCGCGATTAT
GTACGCGGCTATACGCGACT

Product: indigoidine synthase A family protein

Products: NA

Alternate protein names: PsiMP glycosidase [H]

Number of amino acids: Translated: 304; Mature: 304

Protein sequence:

>304_residues
MLEQYLDINPEVAAALAAGKPVVALESTIISHGMPYPQNVETALKVEQIIRDNGAVPATIAILKGRLKVGMTHEEIEYLG
KAGLDVIKTSRRDIPFIVAKGVDGATTVASTMILAQMAGIKVFATGGIGGVHRGAQQTFDISADLQELANTDVAVVCAGA
KSILDIGLTLEYLETQGVPVVGYQTSTLPAFYTRESEFGVDYQLDTPAQIAAAMKAKWDMDLKGGLVIANPIPEAHQLDR
AMIDQVIADAVAEMDSKGIFGKASTPFLLAKVAETTKGVSLAANIELVFNNAKLAANIAVEYAK

Sequences:

>Translated_304_residues
MLEQYLDINPEVAAALAAGKPVVALESTIISHGMPYPQNVETALKVEQIIRDNGAVPATIAILKGRLKVGMTHEEIEYLG
KAGLDVIKTSRRDIPFIVAKGVDGATTVASTMILAQMAGIKVFATGGIGGVHRGAQQTFDISADLQELANTDVAVVCAGA
KSILDIGLTLEYLETQGVPVVGYQTSTLPAFYTRESEFGVDYQLDTPAQIAAAMKAKWDMDLKGGLVIANPIPEAHQLDR
AMIDQVIADAVAEMDSKGIFGKASTPFLLAKVAETTKGVSLAANIELVFNNAKLAANIAVEYAK
>Mature_304_residues
MLEQYLDINPEVAAALAAGKPVVALESTIISHGMPYPQNVETALKVEQIIRDNGAVPATIAILKGRLKVGMTHEEIEYLG
KAGLDVIKTSRRDIPFIVAKGVDGATTVASTMILAQMAGIKVFATGGIGGVHRGAQQTFDISADLQELANTDVAVVCAGA
KSILDIGLTLEYLETQGVPVVGYQTSTLPAFYTRESEFGVDYQLDTPAQIAAAMKAKWDMDLKGGLVIANPIPEAHQLDR
AMIDQVIADAVAEMDSKGIFGKASTPFLLAKVAETTKGVSLAANIELVFNNAKLAANIAVEYAK

Specific function: Catalyzes the hydrolysis of pseudouridine 5'-phosphate (PsiMP) to ribose 5-phosphate and uracil [H]

COG id: COG2313

COG function: function code Q; Uncharacterized enzyme involved in pigment biosynthesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pseudouridine-5'-phosphate glycosidase family [H]

Homologues:

Organism=Escherichia coli, GI1788490, Length=301, Percent_Identity=65.4485049833887, Blast_Score=399, Evalue=1e-112,
Organism=Caenorhabditis elegans, GI25147470, Length=303, Percent_Identity=46.8646864686469, Blast_Score=272, Evalue=2e-73,
Organism=Drosophila melanogaster, GI24580669, Length=298, Percent_Identity=53.3557046979866, Blast_Score=308, Evalue=3e-84,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022830
- InterPro:   IPR007342 [H]

Pfam domain/function: PF04227 Indigoidine_A [H]

EC number: NA

Molecular weight: Translated: 32111; Mature: 32111

Theoretical pI: Translated: 4.70; Mature: 4.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLEQYLDINPEVAAALAAGKPVVALESTIISHGMPYPQNVETALKVEQIIRDNGAVPATI
CCCCCCCCCHHHHHHHHCCCCEEEHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCEEE
AILKGRLKVGMTHEEIEYLGKAGLDVIKTSRRDIPFIVAKGVDGATTVASTMILAQMAGI
EEECCHHHCCCCHHHHHHHHHCCHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHCCE
KVFATGGIGGVHRGAQQTFDISADLQELANTDVAVVCAGAKSILDIGLTLEYLETQGVPV
EEEEECCCCCCCCCCCCEECCCHHHHHHCCCCEEEEECCCHHHHHHCCEEEEHHCCCCEE
VGYQTSTLPAFYTRESEFGVDYQLDTPAQIAAAMKAKWDMDLKGGLVIANPIPEAHQLDR
EEEECCCCCEEEECCCCCCCEEEECCHHHHHHHHHHCCCCCCCCCEEEECCCCCHHHHHH
AMIDQVIADAVAEMDSKGIFGKASTPFLLAKVAETTKGVSLAANIELVFNNAKLAANIAV
HHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCEEEEEEEEEEEECCEEEEEEEE
EYAK
EECC
>Mature Secondary Structure
MLEQYLDINPEVAAALAAGKPVVALESTIISHGMPYPQNVETALKVEQIIRDNGAVPATI
CCCCCCCCCHHHHHHHHCCCCEEEHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCEEE
AILKGRLKVGMTHEEIEYLGKAGLDVIKTSRRDIPFIVAKGVDGATTVASTMILAQMAGI
EEECCHHHCCCCHHHHHHHHHCCHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHCCE
KVFATGGIGGVHRGAQQTFDISADLQELANTDVAVVCAGAKSILDIGLTLEYLETQGVPV
EEEEECCCCCCCCCCCCEECCCHHHHHHCCCCEEEEECCCHHHHHHCCEEEEHHCCCCEE
VGYQTSTLPAFYTRESEFGVDYQLDTPAQIAAAMKAKWDMDLKGGLVIANPIPEAHQLDR
EEEECCCCCEEEECCCCCCCEEEECCHHHHHHHHHHCCCCCCCCCEEEECCCCCHHHHHH
AMIDQVIADAVAEMDSKGIFGKASTPFLLAKVAETTKGVSLAANIELVFNNAKLAANIAV
HHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCEEEEEEEEEEEECCEEEEEEEE
EYAK
EECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA