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The map label for this gene is yqcA [H]

Identifier: 167624901

GI number: 167624901

Start: 3632778

End: 3633242

Strand: Reverse

Name: yqcA [H]

Synonym: Shal_2987

Alternate gene names: 167624901

Gene position: 3633242-3632778 (Counterclockwise)

Preceding gene: 167624902

Following gene: 167624900

Centisome position: 69.51

GC content: 44.95

Gene sequence:

>465_bases
ATGAAAAAAGTGAATCTAGTTTTTGGAACAGTTTATGGGGGAGCGCAGTTTGTTGCCGAGACGCTACAACAAGCGTTAAT
TGAGTTAGGGCGTGATGCTGTCTTGTATCAACCCGAACAGTTATCGGGCTTCGTGCCACCAGAAGATGAACTGCTATTGC
TTGTGTGTTCGACGACAGGCCAAGGTGACTTGCCTGAAGATATCCAGCCTTGGTTCAATGAAATGCAGTCAAAGGCACCT
TATTTACCCAATCTTAAATTTGGTTTGATTGCGCTCGGTGACTCCAGCTACGAAACATACTGTGGTGCGGGTGAACAGCT
TTTAAATCTCTTTGAAGAGTTAGGTGCCAAGCTGCTAGGGGAGTTTTTAAAAATTGACGCAGGTGAAACAATGGAGCCTG
AAGTTGAAGCGTTAACTTGGTTACCGAGTTGGAATAAACTCATCGATACCGAGTTGGCAGCTTAG

Upstream 100 bases:

>100_bases
TTCTTAGCTATCACTTCAATATTGCTGTAAAGCTTGCAGCAATGTTTGTCGGTACAGTATGTTAAGGATATAACTAAATA
GCTTTTAGGCGAAGTAAAAC

Downstream 100 bases:

>100_bases
GCAAGGGTTTTATCTACTCGTGATAATGGCTACAGCCACTCATGGCTTAGCCATTTTTGTTTTAATTTTCTTTCCCTTAA
TTTATCGATATCTCGATATG

Product: flavodoxin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 154; Mature: 154

Protein sequence:

>154_residues
MKKVNLVFGTVYGGAQFVAETLQQALIELGRDAVLYQPEQLSGFVPPEDELLLLVCSTTGQGDLPEDIQPWFNEMQSKAP
YLPNLKFGLIALGDSSYETYCGAGEQLLNLFEELGAKLLGEFLKIDAGETMEPEVEALTWLPSWNKLIDTELAA

Sequences:

>Translated_154_residues
MKKVNLVFGTVYGGAQFVAETLQQALIELGRDAVLYQPEQLSGFVPPEDELLLLVCSTTGQGDLPEDIQPWFNEMQSKAP
YLPNLKFGLIALGDSSYETYCGAGEQLLNLFEELGAKLLGEFLKIDAGETMEPEVEALTWLPSWNKLIDTELAA
>Mature_154_residues
MKKVNLVFGTVYGGAQFVAETLQQALIELGRDAVLYQPEQLSGFVPPEDELLLLVCSTTGQGDLPEDIQPWFNEMQSKAP
YLPNLKFGLIALGDSSYETYCGAGEQLLNLFEELGAKLLGEFLKIDAGETMEPEVEALTWLPSWNKLIDTELAA

Specific function: Probable electron transporter [H]

COG id: COG0716

COG function: function code C; Flavodoxins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 flavodoxin-like domain [H]

Homologues:

Organism=Escherichia coli, GI1789154, Length=148, Percent_Identity=41.2162162162162, Blast_Score=124, Evalue=2e-30,
Organism=Escherichia coli, GI1790181, Length=151, Percent_Identity=35.7615894039735, Blast_Score=93, Evalue=8e-21,
Organism=Caenorhabditis elegans, GI17566446, Length=119, Percent_Identity=31.0924369747899, Blast_Score=67, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001094
- InterPro:   IPR008254 [H]

Pfam domain/function: PF00258 Flavodoxin_1 [H]

EC number: NA

Molecular weight: Translated: 16959; Mature: 16959

Theoretical pI: Translated: 3.77; Mature: 3.77

Prosite motif: PS50902 FLAVODOXIN_LIKE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKVNLVFGTVYGGAQFVAETLQQALIELGRDAVLYQPEQLSGFVPPEDELLLLVCSTTG
CCCEEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEECHHHHCCCCCCCCCEEEEEECCCC
QGDLPEDIQPWFNEMQSKAPYLPNLKFGLIALGDSSYETYCGAGEQLLNLFEELGAKLLG
CCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCHHCCCHHHHHHHHHHHHHHHHH
EFLKIDAGETMEPEVEALTWLPSWNKLIDTELAA
HHHHCCCCCCCCCCHHHEEECCCCHHHHHHHCCC
>Mature Secondary Structure
MKKVNLVFGTVYGGAQFVAETLQQALIELGRDAVLYQPEQLSGFVPPEDELLLLVCSTTG
CCCEEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEECHHHHCCCCCCCCCEEEEEECCCC
QGDLPEDIQPWFNEMQSKAPYLPNLKFGLIALGDSSYETYCGAGEQLLNLFEELGAKLLG
CCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCHHCCCHHHHHHHHHHHHHHHHH
EFLKIDAGETMEPEVEALTWLPSWNKLIDTELAA
HHHHCCCCCCCCCCHHHEEECCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]