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The map label for this gene is 167624876

Identifier: 167624876

GI number: 167624876

Start: 3602204

End: 3602926

Strand: Reverse

Name: 167624876

Synonym: Shal_2962

Alternate gene names: NA

Gene position: 3602926-3602204 (Counterclockwise)

Preceding gene: 167624877

Following gene: 167624873

Centisome position: 68.93

GC content: 48.13

Gene sequence:

>723_bases
GTGCATTACCTCATTTTTATTCTGTTGGCACCGATCTTATTTTTACAAGGTCGCACAGTTAAGAAGAACACCCCACAGCT
GCCCGAAGCAGCAGGGCCTAGGCAAGGTACTGTCGGTAATGGTGCGACATTATCTGTACTTATCTTAGGTGACAGTGCTG
CAGCGGGAGTCGGCGTGGCTCACCAGCAGCAGGCATTAGCGGGAGTTGTTGTGAATGAGCTTGCCCAGCACTATCAGGTT
GATTGGCGATTAATGGCAAAGTCTGGTCACAATACCCTGCAAGCCATTGACATGTTGCAACAGGAACTCGTCCAACAGCA
AGAGATGCGTTTTGAGGCGGTTGTGGTATCGCTAGGTGTAAATGACGTACTGAGCCCTTTAACCGTTAATAAGTGGATAG
GTCAGCAACAAACTTTGGTTGAGTTAGTCACCAGAAAACTAGGTTGTCGGCGTTTGATATTGACGCGGGTGCCACCTATG
GGGGATTTCCCGGTGTTACCGCAGCCTTTGCGTTGGTTTCTCGGTCAACGTAGCCAAGCATTTAACCGGCAACTGCAGCG
CTATGCTTTGCAAGAACCAAGGTTTACTTTGTTGGAGTTTGGCCATCAACTCAATAGTGATGCGATGGCTACTGATGGCT
TTCACCCTGGCGCATTAATTTACCAAGATTGGGGGCAGAGCGTTGTAAATGCGCTTTTAGCCGATAATACTAAGTCTAAT
TAA

Upstream 100 bases:

>100_bases
GCCTCTCTGTAACCCTCATTCGGTAAAGTTTCGCTATAGTTAATGGTTGTAAAACAGGTTCAGCCAAACTCTTGATGCTG
AATATTCAAGGAGTGCAACC

Downstream 100 bases:

>100_bases
TATTAAAAAATTGTTTTATTTCATCAATTTGGCACATGGCGTCCTCATAGCCCAGCTCTATCAAGGCACTGCAATAACTT
TGTTCAAATAATAAATAAGA

Product: hypothetical protein

Products: NA

Alternate protein names: GDSL-Like Lipase/Acylhydrolase Domain-Containing Protein; GDSL-Like Lipase/Acylhydrolase; GDSL Family Lipase; SGNH Hydrolase; Lysophospholipase; Lipolytic Protein G-D-S-L Family; G-D-S-L Lipolytic Protein

Number of amino acids: Translated: 240; Mature: 240

Protein sequence:

>240_residues
MHYLIFILLAPILFLQGRTVKKNTPQLPEAAGPRQGTVGNGATLSVLILGDSAAAGVGVAHQQQALAGVVVNELAQHYQV
DWRLMAKSGHNTLQAIDMLQQELVQQQEMRFEAVVVSLGVNDVLSPLTVNKWIGQQQTLVELVTRKLGCRRLILTRVPPM
GDFPVLPQPLRWFLGQRSQAFNRQLQRYALQEPRFTLLEFGHQLNSDAMATDGFHPGALIYQDWGQSVVNALLADNTKSN

Sequences:

>Translated_240_residues
MHYLIFILLAPILFLQGRTVKKNTPQLPEAAGPRQGTVGNGATLSVLILGDSAAAGVGVAHQQQALAGVVVNELAQHYQV
DWRLMAKSGHNTLQAIDMLQQELVQQQEMRFEAVVVSLGVNDVLSPLTVNKWIGQQQTLVELVTRKLGCRRLILTRVPPM
GDFPVLPQPLRWFLGQRSQAFNRQLQRYALQEPRFTLLEFGHQLNSDAMATDGFHPGALIYQDWGQSVVNALLADNTKSN
>Mature_240_residues
MHYLIFILLAPILFLQGRTVKKNTPQLPEAAGPRQGTVGNGATLSVLILGDSAAAGVGVAHQQQALAGVVVNELAQHYQV
DWRLMAKSGHNTLQAIDMLQQELVQQQEMRFEAVVVSLGVNDVLSPLTVNKWIGQQQTLVELVTRKLGCRRLILTRVPPM
GDFPVLPQPLRWFLGQRSQAFNRQLQRYALQEPRFTLLEFGHQLNSDAMATDGFHPGALIYQDWGQSVVNALLADNTKSN

Specific function: Unknown

COG id: COG2755

COG function: function code E; Lysophospholipase L1 and related esterases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26581; Mature: 26581

Theoretical pI: Translated: 9.08; Mature: 9.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHYLIFILLAPILFLQGRTVKKNTPQLPEAAGPRQGTVGNGATLSVLILGDSAAAGVGVA
CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCHH
HQQQALAGVVVNELAQHYQVDWRLMAKSGHNTLQAIDMLQQELVQQQEMRFEAVVVSLGV
HHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH
NDVLSPLTVNKWIGQQQTLVELVTRKLGCRRLILTRVPPMGDFPVLPQPLRWFLGQRSQA
HHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCHHHH
FNRQLQRYALQEPRFTLLEFGHQLNSDAMATDGFHPGALIYQDWGQSVVNALLADNTKSN
HHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MHYLIFILLAPILFLQGRTVKKNTPQLPEAAGPRQGTVGNGATLSVLILGDSAAAGVGVA
CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCHH
HQQQALAGVVVNELAQHYQVDWRLMAKSGHNTLQAIDMLQQELVQQQEMRFEAVVVSLGV
HHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH
NDVLSPLTVNKWIGQQQTLVELVTRKLGCRRLILTRVPPMGDFPVLPQPLRWFLGQRSQA
HHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCHHHH
FNRQLQRYALQEPRFTLLEFGHQLNSDAMATDGFHPGALIYQDWGQSVVNALLADNTKSN
HHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA