Click here to switch to the map view.

The map label for this gene is 167624857

Identifier: 167624857

GI number: 167624857

Start: 3577046

End: 3578626

Strand: Reverse

Name: 167624857

Synonym: Shal_2943

Alternate gene names: NA

Gene position: 3578626-3577046 (Counterclockwise)

Preceding gene: 167624858

Following gene: 167624855

Centisome position: 68.47

GC content: 46.93

Gene sequence:

>1581_bases
ATGACAATTATAAGCTATGCCGATTCGGCTCTATCGCTGCTGCCTCCGGTAGTTGCAATCGTACTGGCGATGTTAACGCG
TCGTGTCTTACTCTCTTTGGGGCTAGGGATTTTATTGGGAGCGCTACTGCTTACCGATTTCTCTGCACTGCAAACGGGTC
AATACTTAAGTGATAAGGTATTAAGTCTCGTATGGGATGATGGTGCTTTTAATAGCTGGAATCTTTATATTCTAGGTTTT
CTAGTATTGCTCGGCATGATCACTGCGCTGATCACCGTGAGTGGCTCAGCTAGAGCCTTTGCCGATTGGGCTCGTTCTCA
TATCCGCAATAAACGTGATGCTAAACTGCTGACGATGTTCCTAGGTTGTGTGGTGTTTATTGATGACTACTTCAACAGTT
TAGTTGTTGGTAGTGTTGCAAGACCACTGACCGACCGTTACTACATCTCTCGTTGTAAGTTAGCTTACTTGCTGGACTCG
ACTGCTGCGCCTATCTGCGTGATCTCACCAGTTTCAAGCTGGGGTGCCTATATCATCGCCTTGATTGGTGGCATTTTAAC
GGCGCACGGTTTTGCCGATACAGGGCATCTGAGCATATTCGTGCAGATGATCCCAATGAACTTCTATGCGATTTTTGCAC
TCTTGCTGCTACTTTGTGTTGCCTTGATGGGATTAGATGTTGGCCCTATGCGTCAACAAGAGTTAAATGCGCAGAAAGGA
CATCTTTATGACGAATCTAAAGGTTTACCACCTGGAGCGAATTCAGGCCTACCTGAAGCCGATACTGGCAAGATCATGGG
CTTATTCCTACCTATCGCGGTATTAGTGTTTGCGACTTTTTACTTTATGGTTAGCAGCGGCAGCGATGTTCTAACCGCTA
AAGGCTTAGAATTTAGCTTGATTGGTGCATTCGAAAATACCGATGTCGGTTCATCGCTGTTCTTCGGTGCGTTAATAGGT
TTAGCGGTAACACTTGCTTTAGTCATTTACCAAGGCGTGGCTAAGCCAATGATCGCTAAAGGCCTGTTTGAAGGTGCGAA
GTCTATGCTACCTGCCATCTATATCTTGCTGTTTGCATGGACGATTGCGGGTGTAATTGGTCAGCTTGAAACGGGTAAAT
ATATGGCGAGCCTAGCTACAGGCAATATTCCATTTGCTATGCTTCCAGCGGTACTATTTGTGCTAGCGGGTCTAACGGCA
TTTTCAACCGGCACGAGCTGGGGTACCTTTGGTATCATGTTGCCGATTGCTGCCGATATGGCGATGGGTAGCCACACGGG
AATGATGTTACCTATGTTGGCAGCGGTATTGGCTGGTGCGGTATTTGGCGATCACTGCTCGCCAATCTCCGATACTACAA
TCTTGTCGTCGACGGGTGCCAACTGTCACCATATTGACCACGTGATGACACAGCTACCTTATGCGTTAATCGTTGCGGGT
ATTAGCTTAGTCGGTTACATCGTACTTGGCTTTACTGAGTCTGTGATGGCTGGTTTGGTTGCCTGTAGCGTGTTGTTTGT
GATCAGCATTATAGCACTGCGTATTAAGGCGTGTTCGCCAGACAGCCAGTGTAAGCAATAG

Upstream 100 bases:

>100_bases
CTATGGAGCGCTACTGATAGGACAGGTGTAATCAGATATCTATTGCTATATCCCACCAGTTCAGTCGGCCTCCATTCGTA
TTTAGCGAAGAAATAAAAAA

Downstream 100 bases:

>100_bases
CGTAAACAGTTTAGGCCATAATATCGGCAATGATGATTGGAATTTGATGGAGTAATCCATTTGACATAGAAAATCATTCG
ATAAAAAAATCCGCTCTATT

Product: Na+/H+ antiporter NhaC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 526; Mature: 525

Protein sequence:

>526_residues
MTIISYADSALSLLPPVVAIVLAMLTRRVLLSLGLGILLGALLLTDFSALQTGQYLSDKVLSLVWDDGAFNSWNLYILGF
LVLLGMITALITVSGSARAFADWARSHIRNKRDAKLLTMFLGCVVFIDDYFNSLVVGSVARPLTDRYYISRCKLAYLLDS
TAAPICVISPVSSWGAYIIALIGGILTAHGFADTGHLSIFVQMIPMNFYAIFALLLLLCVALMGLDVGPMRQQELNAQKG
HLYDESKGLPPGANSGLPEADTGKIMGLFLPIAVLVFATFYFMVSSGSDVLTAKGLEFSLIGAFENTDVGSSLFFGALIG
LAVTLALVIYQGVAKPMIAKGLFEGAKSMLPAIYILLFAWTIAGVIGQLETGKYMASLATGNIPFAMLPAVLFVLAGLTA
FSTGTSWGTFGIMLPIAADMAMGSHTGMMLPMLAAVLAGAVFGDHCSPISDTTILSSTGANCHHIDHVMTQLPYALIVAG
ISLVGYIVLGFTESVMAGLVACSVLFVISIIALRIKACSPDSQCKQ

Sequences:

>Translated_526_residues
MTIISYADSALSLLPPVVAIVLAMLTRRVLLSLGLGILLGALLLTDFSALQTGQYLSDKVLSLVWDDGAFNSWNLYILGF
LVLLGMITALITVSGSARAFADWARSHIRNKRDAKLLTMFLGCVVFIDDYFNSLVVGSVARPLTDRYYISRCKLAYLLDS
TAAPICVISPVSSWGAYIIALIGGILTAHGFADTGHLSIFVQMIPMNFYAIFALLLLLCVALMGLDVGPMRQQELNAQKG
HLYDESKGLPPGANSGLPEADTGKIMGLFLPIAVLVFATFYFMVSSGSDVLTAKGLEFSLIGAFENTDVGSSLFFGALIG
LAVTLALVIYQGVAKPMIAKGLFEGAKSMLPAIYILLFAWTIAGVIGQLETGKYMASLATGNIPFAMLPAVLFVLAGLTA
FSTGTSWGTFGIMLPIAADMAMGSHTGMMLPMLAAVLAGAVFGDHCSPISDTTILSSTGANCHHIDHVMTQLPYALIVAG
ISLVGYIVLGFTESVMAGLVACSVLFVISIIALRIKACSPDSQCKQ
>Mature_525_residues
TIISYADSALSLLPPVVAIVLAMLTRRVLLSLGLGILLGALLLTDFSALQTGQYLSDKVLSLVWDDGAFNSWNLYILGFL
VLLGMITALITVSGSARAFADWARSHIRNKRDAKLLTMFLGCVVFIDDYFNSLVVGSVARPLTDRYYISRCKLAYLLDST
AAPICVISPVSSWGAYIIALIGGILTAHGFADTGHLSIFVQMIPMNFYAIFALLLLLCVALMGLDVGPMRQQELNAQKGH
LYDESKGLPPGANSGLPEADTGKIMGLFLPIAVLVFATFYFMVSSGSDVLTAKGLEFSLIGAFENTDVGSSLFFGALIGL
AVTLALVIYQGVAKPMIAKGLFEGAKSMLPAIYILLFAWTIAGVIGQLETGKYMASLATGNIPFAMLPAVLFVLAGLTAF
STGTSWGTFGIMLPIAADMAMGSHTGMMLPMLAAVLAGAVFGDHCSPISDTTILSSTGANCHHIDHVMTQLPYALIVAGI
SLVGYIVLGFTESVMAGLVACSVLFVISIIALRIKACSPDSQCKQ

Specific function: Unknown

COG id: COG1757

COG function: function code C; Na+/H+ antiporter

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018461 [H]

Pfam domain/function: PF03553 Na_H_antiporter [H]

EC number: NA

Molecular weight: Translated: 55695; Mature: 55564

Theoretical pI: Translated: 6.41; Mature: 6.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIISYADSALSLLPPVVAIVLAMLTRRVLLSLGLGILLGALLLTDFSALQTGQYLSDKV
CEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
LSLVWDDGAFNSWNLYILGFLVLLGMITALITVSGSARAFADWARSHIRNKRDAKLLTMF
HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHH
LGCVVFIDDYFNSLVVGSVARPLTDRYYISRCKLAYLLDSTAAPICVISPVSSWGAYIIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHH
LIGGILTAHGFADTGHLSIFVQMIPMNFYAIFALLLLLCVALMGLDVGPMRQQELNAQKG
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCC
HLYDESKGLPPGANSGLPEADTGKIMGLFLPIAVLVFATFYFMVSSGSDVLTAKGLEFSL
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCEEE
IGAFENTDVGSSLFFGALIGLAVTLALVIYQGVAKPMIAKGLFEGAKSMLPAIYILLFAW
EECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TIAGVIGQLETGKYMASLATGNIPFAMLPAVLFVLAGLTAFSTGTSWGTFGIMLPIAADM
HHHHHHHCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
AMGSHTGMMLPMLAAVLAGAVFGDHCSPISDTTILSSTGANCHHIDHVMTQLPYALIVAG
HCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHH
ISLVGYIVLGFTESVMAGLVACSVLFVISIIALRIKACSPDSQCKQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCC
>Mature Secondary Structure 
TIISYADSALSLLPPVVAIVLAMLTRRVLLSLGLGILLGALLLTDFSALQTGQYLSDKV
EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
LSLVWDDGAFNSWNLYILGFLVLLGMITALITVSGSARAFADWARSHIRNKRDAKLLTMF
HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHH
LGCVVFIDDYFNSLVVGSVARPLTDRYYISRCKLAYLLDSTAAPICVISPVSSWGAYIIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHH
LIGGILTAHGFADTGHLSIFVQMIPMNFYAIFALLLLLCVALMGLDVGPMRQQELNAQKG
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCC
HLYDESKGLPPGANSGLPEADTGKIMGLFLPIAVLVFATFYFMVSSGSDVLTAKGLEFSL
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCEEE
IGAFENTDVGSSLFFGALIGLAVTLALVIYQGVAKPMIAKGLFEGAKSMLPAIYILLFAW
EECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TIAGVIGQLETGKYMASLATGNIPFAMLPAVLFVLAGLTAFSTGTSWGTFGIMLPIAADM
HHHHHHHCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
AMGSHTGMMLPMLAAVLAGAVFGDHCSPISDTTILSSTGANCHHIDHVMTQLPYALIVAG
HCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHH
ISLVGYIVLGFTESVMAGLVACSVLFVISIIALRIKACSPDSQCKQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]