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The map label for this gene is nrfB [C]

Identifier: 167624842

GI number: 167624842

Start: 3560505

End: 3561443

Strand: Reverse

Name: nrfB [C]

Synonym: Shal_2928

Alternate gene names: 167624842

Gene position: 3561443-3560505 (Counterclockwise)

Preceding gene: 167624844

Following gene: 167624841

Centisome position: 68.14

GC content: 47.6

Gene sequence:

>939_bases
ATGGCCAAATTAATGGCTAGCAGTTTATTCACTCTGTTCATCAGTGTTTTGCCTGCACAAGCGACTCCATGGGATAAGCT
TGACTCAACGCAACTCGAACAAAAATTAACAGAAAAATTTAGTGAAGGTAAATATTCTCCAAAAGGGGCGGACTCTTGCC
TTATGTGTCATAAGAAGAATGCCAAAGTCATGGACATTTTTGACGGCGTTCACGGTGATATGAGTAATAGCAAATCGCCT
ATGGCTGGAGTGCAGTGCGAAGCCTGTCACGGTCCATTAGGTAAGCATAATCGTGGCGGTAAAGAGCCAATGATTAGCTT
CAGTCCTGACAGTAAGCTTTCTGCTTCAAGCCAGAATAGTGTGTGTCAGGGGTGCCATAACGATCCTAACCTAATGTCAT
GGCATAACAGTACTCATAATCTAGAAGAAGTGGCTTGTAGCGATTGTCATGATATTCATGCCGCAAAAGATCCAGCACTT
GACCGTCTAACGGTAAATGACACCTGTACCTCATGTCACACCCGCGCTAAAGCAGACATGAACAAGCGCTCATCTCACCC
AATGAAGTGGGACCAGATGACCTGTACCGATTGTCACAATCCTCATGGTTCGATGACCGAAAGTGCACTGATTAAGCCAA
GCCTTAATGAGACCTGCGCCGAGTGTCACGCCGACAAACGCGGCCCATTCCTGTGGGAGCATGCGCCTGTAATGGAAGAC
TGCTCAAGCTGTCACACACCGCACGGCAGTGTGAATGACAATTTACTGAAGTCTCGTACTCCTCAGTTGTGTCAGCAATG
TCACGCCGATGATGGCCATGCAAGCCGTATGACGAGTCAAGCGGGCCTCGATGCATTCAGTGCTGGTAAGAGTTGCCTAA
ATTGCCACAGCAAGATCCATGGTTCTAACCATCCTGCTGGCAGCAACTTTGCCCGTTAA

Upstream 100 bases:

>100_bases
TCTTGAATTCTGATGTCTGCAGGCAATAAAATACCCCCTTCGATATACAACCGGCCTGTAGTTAATGTCCACAATCAAAA
CCATAAAGTCAGTGAATTTT

Downstream 100 bases:

>100_bases
GTCTAGGAGTGACTACTATGCGTTCAATTAAATCTTTTTCATTAAATCTGATCACTCTTGCGCTATTAGGCACGTGCAGT
AGCGCAATGGCGGCCAACTT

Product: cytochrome C family protein

Products: oxidized cytochrome C552; NH3 [C]

Alternate protein names: Decaheme C-Type Cytochrome DmsE Family; Decaheme Cytochrome C MtrA; Decaheme Cytochrome C; Nitrate/TMAO Reductase; Cytochrome C; Multiheme C-Type Cytochrome; Doubled CXXCH Domain-Containing Protein; Cytochrome; Lipoprotein Cytochrome C; Multiheme Cytochrome; Decaheme Cytochrome C MtrD; Multiheme Cytochrome Family Protein; Double CXXCH Motif-Containing Protein; Cytochrome C-Type Protein NrfB

Number of amino acids: Translated: 312; Mature: 311

Protein sequence:

>312_residues
MAKLMASSLFTLFISVLPAQATPWDKLDSTQLEQKLTEKFSEGKYSPKGADSCLMCHKKNAKVMDIFDGVHGDMSNSKSP
MAGVQCEACHGPLGKHNRGGKEPMISFSPDSKLSASSQNSVCQGCHNDPNLMSWHNSTHNLEEVACSDCHDIHAAKDPAL
DRLTVNDTCTSCHTRAKADMNKRSSHPMKWDQMTCTDCHNPHGSMTESALIKPSLNETCAECHADKRGPFLWEHAPVMED
CSSCHTPHGSVNDNLLKSRTPQLCQQCHADDGHASRMTSQAGLDAFSAGKSCLNCHSKIHGSNHPAGSNFAR

Sequences:

>Translated_312_residues
MAKLMASSLFTLFISVLPAQATPWDKLDSTQLEQKLTEKFSEGKYSPKGADSCLMCHKKNAKVMDIFDGVHGDMSNSKSP
MAGVQCEACHGPLGKHNRGGKEPMISFSPDSKLSASSQNSVCQGCHNDPNLMSWHNSTHNLEEVACSDCHDIHAAKDPAL
DRLTVNDTCTSCHTRAKADMNKRSSHPMKWDQMTCTDCHNPHGSMTESALIKPSLNETCAECHADKRGPFLWEHAPVMED
CSSCHTPHGSVNDNLLKSRTPQLCQQCHADDGHASRMTSQAGLDAFSAGKSCLNCHSKIHGSNHPAGSNFAR
>Mature_311_residues
AKLMASSLFTLFISVLPAQATPWDKLDSTQLEQKLTEKFSEGKYSPKGADSCLMCHKKNAKVMDIFDGVHGDMSNSKSPM
AGVQCEACHGPLGKHNRGGKEPMISFSPDSKLSASSQNSVCQGCHNDPNLMSWHNSTHNLEEVACSDCHDIHAAKDPALD
RLTVNDTCTSCHTRAKADMNKRSSHPMKWDQMTCTDCHNPHGSMTESALIKPSLNETCAECHADKRGPFLWEHAPVMEDC
SSCHTPHGSVNDNLLKSRTPQLCQQCHADDGHASRMTSQAGLDAFSAGKSCLNCHSKIHGSNHPAGSNFAR

Specific function: Plays A Role In Nitrite Reduction. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33946; Mature: 33815

Theoretical pI: Translated: 7.06; Mature: 7.06

Prosite motif: PS51008 MULTIHEME_CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.4 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
10.9 %Cys+Met (Translated Protein)
6.4 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
10.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKLMASSLFTLFISVLPAQATPWDKLDSTQLEQKLTEKFSEGKYSPKGADSCLMCHKKN
CHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCC
AKVMDIFDGVHGDMSNSKSPMAGVQCEACHGPLGKHNRGGKEPMISFSPDSKLSASSQNS
CCEEHHHHCCCCCCCCCCCCCCCCEEHHCCCCCCCCCCCCCCCEEEECCCCCCCCCCCHH
VCQGCHNDPNLMSWHNSTHNLEEVACSDCHDIHAAKDPALDRLTVNDTCTSCHTRAKADM
HHHCCCCCCCCEECCCCCCCHHHHHHHHHHHHHCCCCCCCCEEECCCHHHHHHHHHHHHH
NKRSSHPMKWDQMTCTDCHNPHGSMTESALIKPSLNETCAECHADKRGPFLWEHAPVMED
HHCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHCCCCCCCEEECCCCHHHH
CSSCHTPHGSVNDNLLKSRTPQLCQQCHADDGHASRMTSQAGLDAFSAGKSCLNCHSKIH
HHHHCCCCCCCCHHHHHHCCHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHC
GSNHPAGSNFAR
CCCCCCCCCCCC
>Mature Secondary Structure 
AKLMASSLFTLFISVLPAQATPWDKLDSTQLEQKLTEKFSEGKYSPKGADSCLMCHKKN
HHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCC
AKVMDIFDGVHGDMSNSKSPMAGVQCEACHGPLGKHNRGGKEPMISFSPDSKLSASSQNS
CCEEHHHHCCCCCCCCCCCCCCCCEEHHCCCCCCCCCCCCCCCEEEECCCCCCCCCCCHH
VCQGCHNDPNLMSWHNSTHNLEEVACSDCHDIHAAKDPALDRLTVNDTCTSCHTRAKADM
HHHCCCCCCCCEECCCCCCCHHHHHHHHHHHHHCCCCCCCCEEECCCHHHHHHHHHHHHH
NKRSSHPMKWDQMTCTDCHNPHGSMTESALIKPSLNETCAECHADKRGPFLWEHAPVMED
HHCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHCCCCCCCEEECCCCHHHH
CSSCHTPHGSVNDNLLKSRTPQLCQQCHADDGHASRMTSQAGLDAFSAGKSCLNCHSKIH
HHHHCCCCCCCCHHHHHHCCHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHC
GSNHPAGSNFAR
CCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: reduced cytochrome C552; nitrite [C]

Specific reaction: reduced cytochrome C552 + nitrite = oxidized cytochrome C552 + NH3 [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA