| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is eptA [H]
Identifier: 167624779
GI number: 167624779
Start: 3482397
End: 3484037
Strand: Reverse
Name: eptA [H]
Synonym: Shal_2864
Alternate gene names: 167624779
Gene position: 3484037-3482397 (Counterclockwise)
Preceding gene: 167624780
Following gene: 167624776
Centisome position: 66.66
GC content: 37.05
Gene sequence:
>1641_bases ATGATGAAACGCCCCTTTAAGTCTGGCGTATCCTATGCGCTTTTCACCTTAATACTCGCAATCTACTTCTCATTGGTTGT GAACATTCCTATCTATGCCGAGTTGTACACAATATTTAATAATATTAATCCTGTTAAAATTGGCTTTGTACTATCAATTC CAATATTTTTTGGGGCAGCATTAAATTTTCTTTTTAATTTATTTAGTTGGCCTGTTATAGCGAAACCTTTTTTTATCATC TTGCTAATTCTTTCCAGCATTGTGAGTTATGCCGGTTATAATTATGGAACACTCTTTGATTACAATATGATCGCTAATAT TGTGGAAACGGATTCGAGTGAAGCGGGGTCTTATCTAAGTAGTTATTCTGTTCTGTGGGTTGTGTTAATGGGCATCATAC CCGCATTGATTGTGTTCATGGTCCCCATAGGGATCAAACAGAGTCCGGCTAAAATGCTTTCGATGAAGCTGGTTTCGATG GCGCTATCATTGGTTGTAATAGTGGTGATCGCAGCCCTATATTATCAAGACTACTCATCGGTTGGTCGTAACAATCGCTA TTTGAAAAAAGCCATTATTCCCACTCAGTTTGTCTATAGCACTACCGAGTACATCTGGAAAACCTTTCTTTCAGTTCCAC TTGAATATCGCCAAATTGGATTGGATGCCAAACAGACAGATTCAACTCTCGCAGCATCCGAAAATAAACCAACGTTAATG GTACTTGTTGTAGGTGAAACAGCACGTTCACAAAACTATGAATTAAATGGTTATCCTAGAGATACCAATGAATACACCCG CGATCTCGGTATCATTTCATTTCAAAACGTAAGTTCATGCGGCACGGCCACCGCAGTCTCAGTTCCCTGTATGTTTTCAT CGATGACGAAAAATGAATTCAATCGAGATGTTGCTGATAATCAAGATAATGTATTGGATATCTTAAAACGCGCTAATATT GCATTACTGTGGAAAGAAAATGATGGCGGAGATAAGAATGTTGCTGCTCGCATCGATAAAGTAACCATTGAACGTTCGAA TAAAAATGAGTTTTGCGATGGTATGACATGCTATGACATGGCTTTACTGGACAACCTTGAGCAAGATATTGATTCCCTTG AAGGGAATAGAATGATCATTCTTCATATTATGGGAAGCCATGGGCCGACATATTATAAGCGCTACCCAGCAGAGATGAAA AAATTTAAACCAGACTGTCCCAGAAGTGATATAGAAAATTGCTCCATAGAAGAGATTGTTAATTCATACGATAATACAAT TTTATATACCGACTATGTGGTCAGCAATGTTATCTCAAAGTTAGAGAAACTTGAAGATAAGTACAATACATCACTTATTT ACATATCTGACCATGGTGAATCTCTTGGTGAGAAAGGCATGTTTTTGCATGGTATGCCTTATAGTTTCGCCCCTGATTAC CAAACAAAAGTACCACTAATGGTATGGATGTCAGAAGGCTTTAAAGAAACGAAAAACATTAATAGTGAGTGTATTAAAAA AGAAGCCGAATATAATCAATATTCACATGACAATATCTTTCATTCTATATTAGGCGTGATGGACGTTGAAACGAGTGATT ATAAAAACAGTTTAGACATATTTAGTTCTTGTAAAGTGTAG
Upstream 100 bases:
>100_bases TTGTTTGACTGTTTAGTCAAAATAGGGATGATGTCTGCTGGGAAATAGCTATCACTGCTGGAAAACTCTTTTGTATATAG AATCTAATAATGTGAGTCAT
Downstream 100 bases:
>100_bases ATAAAGTTAATAACCAGAATAAAAAATCCAGACGAGCATGGATGCTTAACAGGCTCTTAGATTTGGATATCGTTGCAAGC CTGCCTGACCTCCATGGATG
Product: sulfatase
Products: NA
Alternate protein names: Polymyxin resistance protein pmrC [H]
Number of amino acids: Translated: 546; Mature: 546
Protein sequence:
>546_residues MMKRPFKSGVSYALFTLILAIYFSLVVNIPIYAELYTIFNNINPVKIGFVLSIPIFFGAALNFLFNLFSWPVIAKPFFII LLILSSIVSYAGYNYGTLFDYNMIANIVETDSSEAGSYLSSYSVLWVVLMGIIPALIVFMVPIGIKQSPAKMLSMKLVSM ALSLVVIVVIAALYYQDYSSVGRNNRYLKKAIIPTQFVYSTTEYIWKTFLSVPLEYRQIGLDAKQTDSTLAASENKPTLM VLVVGETARSQNYELNGYPRDTNEYTRDLGIISFQNVSSCGTATAVSVPCMFSSMTKNEFNRDVADNQDNVLDILKRANI ALLWKENDGGDKNVAARIDKVTIERSNKNEFCDGMTCYDMALLDNLEQDIDSLEGNRMIILHIMGSHGPTYYKRYPAEMK KFKPDCPRSDIENCSIEEIVNSYDNTILYTDYVVSNVISKLEKLEDKYNTSLIYISDHGESLGEKGMFLHGMPYSFAPDY QTKVPLMVWMSEGFKETKNINSECIKKEAEYNQYSHDNIFHSILGVMDVETSDYKNSLDIFSSCKV
Sequences:
>Translated_546_residues MMKRPFKSGVSYALFTLILAIYFSLVVNIPIYAELYTIFNNINPVKIGFVLSIPIFFGAALNFLFNLFSWPVIAKPFFII LLILSSIVSYAGYNYGTLFDYNMIANIVETDSSEAGSYLSSYSVLWVVLMGIIPALIVFMVPIGIKQSPAKMLSMKLVSM ALSLVVIVVIAALYYQDYSSVGRNNRYLKKAIIPTQFVYSTTEYIWKTFLSVPLEYRQIGLDAKQTDSTLAASENKPTLM VLVVGETARSQNYELNGYPRDTNEYTRDLGIISFQNVSSCGTATAVSVPCMFSSMTKNEFNRDVADNQDNVLDILKRANI ALLWKENDGGDKNVAARIDKVTIERSNKNEFCDGMTCYDMALLDNLEQDIDSLEGNRMIILHIMGSHGPTYYKRYPAEMK KFKPDCPRSDIENCSIEEIVNSYDNTILYTDYVVSNVISKLEKLEDKYNTSLIYISDHGESLGEKGMFLHGMPYSFAPDY QTKVPLMVWMSEGFKETKNINSECIKKEAEYNQYSHDNIFHSILGVMDVETSDYKNSLDIFSSCKV >Mature_546_residues MMKRPFKSGVSYALFTLILAIYFSLVVNIPIYAELYTIFNNINPVKIGFVLSIPIFFGAALNFLFNLFSWPVIAKPFFII LLILSSIVSYAGYNYGTLFDYNMIANIVETDSSEAGSYLSSYSVLWVVLMGIIPALIVFMVPIGIKQSPAKMLSMKLVSM ALSLVVIVVIAALYYQDYSSVGRNNRYLKKAIIPTQFVYSTTEYIWKTFLSVPLEYRQIGLDAKQTDSTLAASENKPTLM VLVVGETARSQNYELNGYPRDTNEYTRDLGIISFQNVSSCGTATAVSVPCMFSSMTKNEFNRDVADNQDNVLDILKRANI ALLWKENDGGDKNVAARIDKVTIERSNKNEFCDGMTCYDMALLDNLEQDIDSLEGNRMIILHIMGSHGPTYYKRYPAEMK KFKPDCPRSDIENCSIEEIVNSYDNTILYTDYVVSNVISKLEKLEDKYNTSLIYISDHGESLGEKGMFLHGMPYSFAPDY QTKVPLMVWMSEGFKETKNINSECIKKEAEYNQYSHDNIFHSILGVMDVETSDYKNSLDIFSSCKV
Specific function: Catalyzes the addition of a phosphoethanolamine moiety to the lipid A. The phosphoethanolamine modification is required for resistance to polymyxin [H]
COG id: COG2194
COG function: function code R; Predicted membrane-associated, metal-dependent hydrolase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphoethanolamine transferase family. EptA subfamily [H]
Homologues:
Organism=Escherichia coli, GI87082372, Length=525, Percent_Identity=37.5238095238095, Blast_Score=400, Evalue=1e-113, Organism=Escherichia coli, GI87082286, Length=558, Percent_Identity=25.4480286738351, Blast_Score=157, Evalue=2e-39, Organism=Escherichia coli, GI1790392, Length=427, Percent_Identity=24.3559718969555, Blast_Score=96, Evalue=8e-21, Organism=Escherichia coli, GI87082223, Length=458, Percent_Identity=24.0174672489083, Blast_Score=96, Evalue=8e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017849 - InterPro: IPR017850 - InterPro: IPR012549 - InterPro: IPR000917 [H]
Pfam domain/function: PF08019 DUF1705; PF00884 Sulfatase [H]
EC number: NA
Molecular weight: Translated: 61752; Mature: 61752
Theoretical pI: Translated: 4.94; Mature: 4.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMKRPFKSGVSYALFTLILAIYFSLVVNIPIYAELYTIFNNINPVKIGFVLSIPIFFGAA CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCEEEEHHHHHHHHHHHH LNFLFNLFSWPVIAKPFFIILLILSSIVSYAGYNYGTLFDYNMIANIVETDSSEAGSYLS HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHCCCCHHHHHHH SYSVLWVVLMGIIPALIVFMVPIGIKQSPAKMLSMKLVSMALSLVVIVVIAALYYQDYSS HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VGRNNRYLKKAIIPTQFVYSTTEYIWKTFLSVPLEYRQIGLDAKQTDSTLAASENKPTLM HCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHCCCCHHCCCHHCCCCCCCEEE VLVVGETARSQNYELNGYPRDTNEYTRDLGIISFQNVSSCGTATAVSVPCMFSSMTKNEF EEEECCCCCCCCCCCCCCCCCCHHHHHHCCCEEECCCCCCCCCHHEEHHHHHHHHHHHHH NRDVADNQDNVLDILKRANIALLWKENDGGDKNVAARIDKVTIERSNKNEFCDGMTCYDM CCCCCCCCHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHEEEECCCCCCCCCCCHHHHH ALLDNLEQDIDSLEGNRMIILHIMGSHGPTYYKRYPAEMKKFKPDCPRSDIENCSIEEIV HHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHCCHHHHHCCCCCCCCCCCCCCHHHHH NSYDNTILYTDYVVSNVISKLEKLEDKYNTSLIYISDHGESLGEKGMFLHGMPYSFAPDY HHHCCEEEEHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCEEECCCCCCCCCC QTKVPLMVWMSEGFKETKNINSECIKKEAEYNQYSHDNIFHSILGVMDVETSDYKNSLDI CCCCCEEEEEHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCHHHH FSSCKV HHCCCC >Mature Secondary Structure MMKRPFKSGVSYALFTLILAIYFSLVVNIPIYAELYTIFNNINPVKIGFVLSIPIFFGAA CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCEEEEHHHHHHHHHHHH LNFLFNLFSWPVIAKPFFIILLILSSIVSYAGYNYGTLFDYNMIANIVETDSSEAGSYLS HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHCCCCHHHHHHH SYSVLWVVLMGIIPALIVFMVPIGIKQSPAKMLSMKLVSMALSLVVIVVIAALYYQDYSS HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VGRNNRYLKKAIIPTQFVYSTTEYIWKTFLSVPLEYRQIGLDAKQTDSTLAASENKPTLM HCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHCCCCHHCCCHHCCCCCCCEEE VLVVGETARSQNYELNGYPRDTNEYTRDLGIISFQNVSSCGTATAVSVPCMFSSMTKNEF EEEECCCCCCCCCCCCCCCCCCHHHHHHCCCEEECCCCCCCCCHHEEHHHHHHHHHHHHH NRDVADNQDNVLDILKRANIALLWKENDGGDKNVAARIDKVTIERSNKNEFCDGMTCYDM CCCCCCCCHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHEEEECCCCCCCCCCCHHHHH ALLDNLEQDIDSLEGNRMIILHIMGSHGPTYYKRYPAEMKKFKPDCPRSDIENCSIEEIV HHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHCCHHHHHCCCCCCCCCCCCCCHHHHH NSYDNTILYTDYVVSNVISKLEKLEDKYNTSLIYISDHGESLGEKGMFLHGMPYSFAPDY HHHCCEEEEHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCEEECCCCCCCCCC QTKVPLMVWMSEGFKETKNINSECIKKEAEYNQYSHDNIFHSILGVMDVETSDYKNSLDI CCCCCEEEEEHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCHHHH FSSCKV HHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8391535; 11677609 [H]