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The map label for this gene is ybiT [H]

Identifier: 167624780

GI number: 167624780

Start: 3484876

End: 3486468

Strand: Reverse

Name: ybiT [H]

Synonym: Shal_2866

Alternate gene names: 167624780

Gene position: 3486468-3484876 (Counterclockwise)

Preceding gene: 167624781

Following gene: 167624779

Centisome position: 66.7

GC content: 43.94

Gene sequence:

>1593_bases
TTGATTACTACAGCTAATATCACCATGCAGTTTGGCGCTAAGCCACTGTTTGAAAACATCTCAATTAAGTTTGGCGGCGG
AAACAGATACGGTCTGATCGGCGCGAACGGTTGTGGTAAATCAACCTTTATGAAGATCCTTGCTGGTGATTTAGAGCCAA
CAGGTGGTAACGTTTCATTAGACGTGAACGAGCGTTTGGGTAAGCTAAGCCAGAACCAATTTGGTTACGAAGAGTTCAAC
GTAGTTGATACCGTAATTATGGGCCATGCCGAGCTTTGGAAAGTGAAGCAAGAGCGTGACCGTATTTATTCTCTACCAGA
AATGACTGAAGAAGACGGCATTAAAGTCGCTGATTTAGAAATGGAGTTCGCTGAGATGGACGGTTATACCGCTGAATCTC
GCGCGGGTGAACTACTAATGGGCGTGGGTATTGGTGTTGAACAGCATTTCGGCCTAATGAGCGAAATCGCACCTGGCTTT
AAGCTACGTGTACTTTTGGCTCAGGCATTGTTCTCAGATCCAGATGTATTACTACTTGACGAACCAACCAACAACTTGGA
CATCGACACCATCCGCTGGTTGCAAGAGATGCTAAACCAACGTAACAGCACCATGATTATCATCTCGCACGATAGATATT
TCTTGAACTCGGTGTGTACTCACATGGCTGACTTAGACTACGGTGATATACGTGTATTCCCAGGCAACTACGACGAATAC
ATGATGGCTGCGCAGCAATCGCGTGAGCGTTTGATGTCTGACAACGCTAAGAAGAAAGCACAGATTGCTGAACTTCAAGG
TTTCGTTGCACGTTTCTCTGCTAACGCATCTAAAGCTAAGCAAGCAACATCACGTGCCAAGCTTATCGATAAGATCAAGC
TTGATGAAATAAAAGCATCTAGCCGTGTTAATCCATTTATTCGTTTCGAACAAGAGAAGAAATTGTTCCGTAACGCTTTG
ATTATTGAAGACTTAACCAAAGGCTTCGATCACCCGCTATTTAAAGATCTTAATATCATTGCAGAAGTTGGCGAGCGTAT
TGCTATCTTGGGTGATAACGGTGTGGGTAAGACGACATTACTACGTACTCTAGTACACGATATCCCACAAGATTCGGGTA
CCATTCAATGGTCTGAAAACTCAGCGATTGGTTATTACGCACAGGATCACGAGTCAGATTTTGCTAACGACATGACCTTG
TTTGAGTGGATGAGCCAGTGGCGCAAGCCAGAAGACGATGACCAGTCAGTACGTGGTTACTTAGGCCGTATGCTGTTCGG
TTCAGACGATATTAAGAAGTCTGTTAAAGTCCTGTCTGGTGGTGAGAAGGGCCGTATGCTGTTTGGTAAGCTAATTATGC
AAAAGCCAAACATCTTGCTACTTGATGAGCCAACCAACCACATGGATATGGAATCAATCGAGTCATTGAACAACGCGTTA
GAGATGTACGAAGGTACACTAATCTTCGTCAGTCATGACCGTGCATTTGTATCATCATTGGCTAACCGTATTATTGAAAT
CACACCAAATGGCGTGAATGATTTCAAAGGCACTTATGATGAGTTCCTAACGAGCAAAGGTATCGAAGGTTAA

Upstream 100 bases:

>100_bases
GCCGGTAAAGTTGGTTCAGATTAAAACTTGAACTAACTTTACTGGTTTTTGTTTTATCTATGATGACGTTAATCATATAA
CCAAAAGCGGAATTGTCACT

Downstream 100 bases:

>100_bases
TTTTTATAGACCTTGTCTCTTATCTAATTGAGAGACTTAACGGATAGAGCTTGTTTATCGCTTTATAAAAGAGAAAGCCC
GAGAAATCGGGCTTTTTTGT

Product: ABC transporter-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 530; Mature: 530

Protein sequence:

>530_residues
MITTANITMQFGAKPLFENISIKFGGGNRYGLIGANGCGKSTFMKILAGDLEPTGGNVSLDVNERLGKLSQNQFGYEEFN
VVDTVIMGHAELWKVKQERDRIYSLPEMTEEDGIKVADLEMEFAEMDGYTAESRAGELLMGVGIGVEQHFGLMSEIAPGF
KLRVLLAQALFSDPDVLLLDEPTNNLDIDTIRWLQEMLNQRNSTMIIISHDRYFLNSVCTHMADLDYGDIRVFPGNYDEY
MMAAQQSRERLMSDNAKKKAQIAELQGFVARFSANASKAKQATSRAKLIDKIKLDEIKASSRVNPFIRFEQEKKLFRNAL
IIEDLTKGFDHPLFKDLNIIAEVGERIAILGDNGVGKTTLLRTLVHDIPQDSGTIQWSENSAIGYYAQDHESDFANDMTL
FEWMSQWRKPEDDDQSVRGYLGRMLFGSDDIKKSVKVLSGGEKGRMLFGKLIMQKPNILLLDEPTNHMDMESIESLNNAL
EMYEGTLIFVSHDRAFVSSLANRIIEITPNGVNDFKGTYDEFLTSKGIEG

Sequences:

>Translated_530_residues
MITTANITMQFGAKPLFENISIKFGGGNRYGLIGANGCGKSTFMKILAGDLEPTGGNVSLDVNERLGKLSQNQFGYEEFN
VVDTVIMGHAELWKVKQERDRIYSLPEMTEEDGIKVADLEMEFAEMDGYTAESRAGELLMGVGIGVEQHFGLMSEIAPGF
KLRVLLAQALFSDPDVLLLDEPTNNLDIDTIRWLQEMLNQRNSTMIIISHDRYFLNSVCTHMADLDYGDIRVFPGNYDEY
MMAAQQSRERLMSDNAKKKAQIAELQGFVARFSANASKAKQATSRAKLIDKIKLDEIKASSRVNPFIRFEQEKKLFRNAL
IIEDLTKGFDHPLFKDLNIIAEVGERIAILGDNGVGKTTLLRTLVHDIPQDSGTIQWSENSAIGYYAQDHESDFANDMTL
FEWMSQWRKPEDDDQSVRGYLGRMLFGSDDIKKSVKVLSGGEKGRMLFGKLIMQKPNILLLDEPTNHMDMESIESLNNAL
EMYEGTLIFVSHDRAFVSSLANRIIEITPNGVNDFKGTYDEFLTSKGIEG
>Mature_530_residues
MITTANITMQFGAKPLFENISIKFGGGNRYGLIGANGCGKSTFMKILAGDLEPTGGNVSLDVNERLGKLSQNQFGYEEFN
VVDTVIMGHAELWKVKQERDRIYSLPEMTEEDGIKVADLEMEFAEMDGYTAESRAGELLMGVGIGVEQHFGLMSEIAPGF
KLRVLLAQALFSDPDVLLLDEPTNNLDIDTIRWLQEMLNQRNSTMIIISHDRYFLNSVCTHMADLDYGDIRVFPGNYDEY
MMAAQQSRERLMSDNAKKKAQIAELQGFVARFSANASKAKQATSRAKLIDKIKLDEIKASSRVNPFIRFEQEKKLFRNAL
IIEDLTKGFDHPLFKDLNIIAEVGERIAILGDNGVGKTTLLRTLVHDIPQDSGTIQWSENSAIGYYAQDHESDFANDMTL
FEWMSQWRKPEDDDQSVRGYLGRMLFGSDDIKKSVKVLSGGEKGRMLFGKLIMQKPNILLLDEPTNHMDMESIESLNNAL
EMYEGTLIFVSHDRAFVSSLANRIIEITPNGVNDFKGTYDEFLTSKGIEG

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI148612853, Length=532, Percent_Identity=29.3233082706767, Blast_Score=250, Evalue=2e-66,
Organism=Homo sapiens, GI27881506, Length=534, Percent_Identity=28.2771535580524, Blast_Score=226, Evalue=3e-59,
Organism=Homo sapiens, GI10947137, Length=534, Percent_Identity=28.2771535580524, Blast_Score=226, Evalue=4e-59,
Organism=Homo sapiens, GI10947135, Length=544, Percent_Identity=28.3088235294118, Blast_Score=199, Evalue=6e-51,
Organism=Homo sapiens, GI69354671, Length=544, Percent_Identity=28.3088235294118, Blast_Score=198, Evalue=1e-50,
Organism=Homo sapiens, GI9961252, Length=209, Percent_Identity=26.3157894736842, Blast_Score=68, Evalue=2e-11,
Organism=Homo sapiens, GI4505771, Length=209, Percent_Identity=26.3157894736842, Blast_Score=68, Evalue=2e-11,
Organism=Escherichia coli, GI1787041, Length=530, Percent_Identity=76.9811320754717, Blast_Score=875, Evalue=0.0,
Organism=Escherichia coli, GI1789751, Length=529, Percent_Identity=32.1361058601134, Blast_Score=281, Evalue=6e-77,
Organism=Escherichia coli, GI1787182, Length=546, Percent_Identity=29.4871794871795, Blast_Score=223, Evalue=2e-59,
Organism=Escherichia coli, GI2367384, Length=521, Percent_Identity=29.9424184261036, Blast_Score=214, Evalue=2e-56,
Organism=Escherichia coli, GI1786398, Length=240, Percent_Identity=30.8333333333333, Blast_Score=84, Evalue=2e-17,
Organism=Escherichia coli, GI1787029, Length=242, Percent_Identity=26.8595041322314, Blast_Score=76, Evalue=5e-15,
Organism=Escherichia coli, GI1788165, Length=206, Percent_Identity=25.7281553398058, Blast_Score=75, Evalue=1e-14,
Organism=Escherichia coli, GI87081709, Length=262, Percent_Identity=27.0992366412214, Blast_Score=74, Evalue=3e-14,
Organism=Escherichia coli, GI1786319, Length=279, Percent_Identity=23.2974910394265, Blast_Score=70, Evalue=3e-13,
Organism=Escherichia coli, GI1786345, Length=238, Percent_Identity=25.6302521008403, Blast_Score=69, Evalue=9e-13,
Organism=Escherichia coli, GI1790525, Length=229, Percent_Identity=25.764192139738, Blast_Score=69, Evalue=1e-12,
Organism=Escherichia coli, GI48994943, Length=245, Percent_Identity=27.3469387755102, Blast_Score=68, Evalue=1e-12,
Organism=Escherichia coli, GI1789672, Length=260, Percent_Identity=24.6153846153846, Blast_Score=66, Evalue=5e-12,
Organism=Escherichia coli, GI1786698, Length=199, Percent_Identity=26.1306532663317, Blast_Score=65, Evalue=9e-12,
Organism=Escherichia coli, GI87081834, Length=206, Percent_Identity=30.5825242718447, Blast_Score=65, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17555318, Length=525, Percent_Identity=29.9047619047619, Blast_Score=247, Evalue=1e-65,
Organism=Caenorhabditis elegans, GI17553372, Length=538, Percent_Identity=30.1115241635688, Blast_Score=232, Evalue=4e-61,
Organism=Caenorhabditis elegans, GI17559834, Length=538, Percent_Identity=27.6951672862454, Blast_Score=211, Evalue=9e-55,
Organism=Caenorhabditis elegans, GI193202349, Length=216, Percent_Identity=28.7037037037037, Blast_Score=69, Evalue=8e-12,
Organism=Saccharomyces cerevisiae, GI6320874, Length=533, Percent_Identity=31.1444652908068, Blast_Score=261, Evalue=2e-70,
Organism=Saccharomyces cerevisiae, GI6321121, Length=539, Percent_Identity=29.8701298701299, Blast_Score=236, Evalue=5e-63,
Organism=Saccharomyces cerevisiae, GI6323278, Length=433, Percent_Identity=24.7113163972286, Blast_Score=121, Evalue=2e-28,
Organism=Saccharomyces cerevisiae, GI6325030, Length=431, Percent_Identity=25.2900232018561, Blast_Score=118, Evalue=2e-27,
Organism=Saccharomyces cerevisiae, GI6324314, Length=441, Percent_Identity=25.8503401360544, Blast_Score=112, Evalue=2e-25,
Organism=Drosophila melanogaster, GI24666836, Length=537, Percent_Identity=30.5400372439479, Blast_Score=255, Evalue=7e-68,
Organism=Drosophila melanogaster, GI24642252, Length=541, Percent_Identity=29.0203327171904, Blast_Score=239, Evalue=5e-63,
Organism=Drosophila melanogaster, GI18859989, Length=541, Percent_Identity=29.0203327171904, Blast_Score=239, Evalue=5e-63,
Organism=Drosophila melanogaster, GI24641342, Length=537, Percent_Identity=27.7467411545624, Blast_Score=218, Evalue=7e-57,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 59540; Mature: 59540

Theoretical pI: Translated: 4.68; Mature: 4.68

Prosite motif: PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITTANITMQFGAKPLFENISIKFGGGNRYGLIGANGCGKSTFMKILAGDLEPTGGNVSL
CEEEEEEEEECCCCCCCCCCEEEECCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCEEEE
DVNERLGKLSQNQFGYEEFNVVDTVIMGHAELWKVKQERDRIYSLPEMTEEDGIKVADLE
EHHHHHCCHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEE
MEFAEMDGYTAESRAGELLMGVGIGVEQHFGLMSEIAPGFKLRVLLAQALFSDPDVLLLD
EHHHHCCCCCCHHCCCCEEEEECCCHHHHHCHHHHHCCCHHHHHHHHHHHHCCCCEEEEE
EPTNNLDIDTIRWLQEMLNQRNSTMIIISHDRYFLNSVCTHMADLDYGDIRVFPGNYDEY
CCCCCCCHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHCCCCCCEEEECCCHHHH
MMAAQQSRERLMSDNAKKKAQIAELQGFVARFSANASKAKQATSRAKLIDKIKLDEIKAS
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHC
SRVNPFIRFEQEKKLFRNALIIEDLTKGFDHPLFKDLNIIAEVGERIAILGDNGVGKTTL
CCCCHHEEEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCEEEEEECCCCCHHHH
LRTLVHDIPQDSGTIQWSENSAIGYYAQDHESDFANDMTLFEWMSQWRKPEDDDQSVRGY
HHHHHHHCCCCCCEEEECCCCEEEEEECCCCCHHHCCHHHHHHHHHHCCCCCCHHHHHHH
LGRMLFGSDDIKKSVKVLSGGEKGRMLFGKLIMQKPNILLLDEPTNHMDMESIESLNNAL
HHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHH
EMYEGTLIFVSHDRAFVSSLANRIIEITPNGVNDFKGTYDEFLTSKGIEG
HHHCCEEEEEECCHHHHHHHHHCEEEECCCCCCCCCCHHHHHHHHCCCCC
>Mature Secondary Structure
MITTANITMQFGAKPLFENISIKFGGGNRYGLIGANGCGKSTFMKILAGDLEPTGGNVSL
CEEEEEEEEECCCCCCCCCCEEEECCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCEEEE
DVNERLGKLSQNQFGYEEFNVVDTVIMGHAELWKVKQERDRIYSLPEMTEEDGIKVADLE
EHHHHHCCHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEE
MEFAEMDGYTAESRAGELLMGVGIGVEQHFGLMSEIAPGFKLRVLLAQALFSDPDVLLLD
EHHHHCCCCCCHHCCCCEEEEECCCHHHHHCHHHHHCCCHHHHHHHHHHHHCCCCEEEEE
EPTNNLDIDTIRWLQEMLNQRNSTMIIISHDRYFLNSVCTHMADLDYGDIRVFPGNYDEY
CCCCCCCHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHCCCCCCEEEECCCHHHH
MMAAQQSRERLMSDNAKKKAQIAELQGFVARFSANASKAKQATSRAKLIDKIKLDEIKAS
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHC
SRVNPFIRFEQEKKLFRNALIIEDLTKGFDHPLFKDLNIIAEVGERIAILGDNGVGKTTL
CCCCHHEEEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCEEEEEECCCCCHHHH
LRTLVHDIPQDSGTIQWSENSAIGYYAQDHESDFANDMTLFEWMSQWRKPEDDDQSVRGY
HHHHHHHCCCCCCEEEECCCCEEEEEECCCCCHHHCCHHHHHHHHHHCCCCCCHHHHHHH
LGRMLFGSDDIKKSVKVLSGGEKGRMLFGKLIMQKPNILLLDEPTNHMDMESIESLNNAL
HHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHH
EMYEGTLIFVSHDRAFVSSLANRIIEITPNGVNDFKGTYDEFLTSKGIEG
HHHCCEEEEEECCHHHHHHHHHCEEEECCCCCCCCCCHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]