Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is feoB [H]

Identifier: 167624694

GI number: 167624694

Start: 3369573

End: 3371867

Strand: Reverse

Name: feoB [H]

Synonym: Shal_2776

Alternate gene names: 167624694

Gene position: 3371867-3369573 (Counterclockwise)

Preceding gene: 167624695

Following gene: 167624693

Centisome position: 64.51

GC content: 45.19

Gene sequence:

>2295_bases
ATGGATAAACAATTTAACTGCGTAACAGTGGGTAACCCTAATGCGGGCAAATCAACACTGTTTAATGCATTAACCGGATC
TAATCAGCAGGTTGGTAACTGGTCAGGCGTAACCGTAGAGAAAAAAACAGGCCAATTTGCACTGCAAGGTTCAGACGTTT
TCTTAACCGATCTTCCGGGTATATATGATCTTCTTCCTGCAGGTAATAGCTGTGACTGTTCTTTAGACGAGCAAATTGCC
CAGCAGTATCTAGCCGATCAACCTATTGACGGTATTATTAACTTAGTTGATGCGACCAATATCGAGCGCCACTTATATCT
AACGGTACAGCTTCGTGAGTTGGGCATTCCAATGGTGGTTGTGCTTAATAAGATTGACGCAGCAGTTGAACGCGGTATTC
ATATCGATATCGCCAAGATGACTGAAGAGTTAGGCTGTCCTGTTGTTGCCGTGTGTTCACGTGAACCTAAAGATATCGAA
AAAGTTAAGCTGCAGTTTGTTGCGCTACTCGATGGCAAGGTCTCTGAAGCGCCACTGGTGCTAGATTATGATGAAGAGAT
TGAATCAGCTGTATCGAATCTATTGTCTCAAGATCCAGAGTTAAGCCGTGGCCGAGCCTTGGCAATGCTTGCAAATGGCT
TAGGCTGTGGTAAATGTAAAAACAGTCAAATGGCGAGCGAAGTCGAGCTGTACTCTCAAGCGCTATCTAGCCAAGGCAAA
GATATTGAGATCATGATTGCGACAACGCGTTTTAACTACGTTGAGCAAGTCTTTACTGGCTCAGTGCAGAGCGACGGTGC
CGAGACCTTCACCGATAAACTCGATAAGTTGGTGTTGCACCCGATTTTTGGGATCCCTGTTTTCCTATTCGTGATGTATT
TGATGTTCATGTTTAGTATTAATGTGGGCAGTTCATTTATTGATTTCTTCGATATTACCGCCGGTGCTATTTTTGTAGAC
CATCTAGGCGCATTTATGTCTAGTCTAGGTTCTCCGACTTGGTTAGTGACCATTATTGCTGGTGGCGTGGGTCAAGGTAT
TCAAACAGTTGCAACCTTTATTCCTGTTATTGCTGCGCTATTCCTAGCACTGTCGGTGCTTGAAGGCTCTGGCTACATGG
CGCGAGCAGCGTTTGTGGTTGATGGCTTAATGCGCCGAATTGGTCTTCCAGGTCGTGCATTTGTGCCTATGATTGTCGGT
TTTGGATGTTCAGTACCGGCGATTATGGCAACCCGTACTTTAGGCAGTGAGCGCGAGCGTATCGTTACTGGTATGATGGC
GCCGTTTATGTCTTGTGGTGCAAGATTACCTGTTTACGCACTGTTTGCGGCAGCGTTCTTCCCAGAGTCGGGGCAGAATC
TAGTGTTCTTGCTTTATATAATAGGTATTTTTGCCGCTATCGGTACAGGCTTACTGTTACGTTCGACTCTACTTCCTGGT
TCTAGCAGCGCAGTGGTGATGGAGCTACCAAGTTACGAGAAACCAAAGTTCAAGACGGTAATGGCTCGTACAGGTAAGCG
TACCAAGAGCTTTATTATGGGGGCGGGTAAGACCATTGTGATAGTGGTGACTTTACTTAACTTTGTAAATGCAATCGGTA
TTGATGGTACGTTTGGTCATGAAGATAGCTCCGAATCAGTATTGAGTGTTGCCAGTCAAAAAGTAACACCACTGTTTGCA
CCTATGGGTGTAGAGCAAGATAACTGGCCTGCAACAGTAGGTATTATTACGGGTATTTTTGCGAAAGAAGCAGTAGTTGG
TACTTTGAATAGTCTTTATTCAGACGCTGGCGCAGGTGATGAAGCATTAGCACCAATTAGCGACACCTTTGGTGAAGCGC
TAGCGACAATTCCTGAGAACTTGTTTGGTATTTCTCCTGATGACCCACTGTCTATTTCAGTCGGTGATGTATCATCGGTA
GAGGCTGCATCAGAAGAACTAGAAGTTGATACTTCAACCTTTGGCGCGCTACAAGCTGGTTTCGCAGGGGTGACTGCTGC
ATTTGCTTACTTACTGTTTATTTTACTATACACCCCTTGTGTGGCCGCTATTGGCGCATTGGTGAATGAGTTTGGTAGCC
GCTGGGCAACATTTGCAGGGCTTTGGACATTTGGTTTAGCTTACGGTGTTGCCACGGTATTCTACCAAGGTGCAACGTTT
GCACAGCACCCATTGCAATCAAGCTTATGGATTGGCTTCTTCGCAATAGCCTTAGTTGTGTTCTACCTCTGGCTTAAGAA
GAAGGGTAAGAAAACCCAGACCATTATCCCAGGCATTAAAGTGATTACTGAATAA

Upstream 100 bases:

>100_bases
CGTAGGGCACCAATGGGCTCGGGTGTTGAATTGGATATCCGCGGCAGTAAGTTATGCATGCGTCGCGATTTAGCAGATAT
TATTGAGGTTGAAAAAGCGA

Downstream 100 bases:

>100_bases
CGCGAATAGCGTATACTGTTATCAAATAATAAAAAGCAGCGATGATTCGCTGCTTTTTGCGCTATAAATATAGCCATTAG
AGAGGTTTTTAAACCTCAGT

Product: ferrous iron transport protein B

Products: Fe (II) [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 764; Mature: 764

Protein sequence:

>764_residues
MDKQFNCVTVGNPNAGKSTLFNALTGSNQQVGNWSGVTVEKKTGQFALQGSDVFLTDLPGIYDLLPAGNSCDCSLDEQIA
QQYLADQPIDGIINLVDATNIERHLYLTVQLRELGIPMVVVLNKIDAAVERGIHIDIAKMTEELGCPVVAVCSREPKDIE
KVKLQFVALLDGKVSEAPLVLDYDEEIESAVSNLLSQDPELSRGRALAMLANGLGCGKCKNSQMASEVELYSQALSSQGK
DIEIMIATTRFNYVEQVFTGSVQSDGAETFTDKLDKLVLHPIFGIPVFLFVMYLMFMFSINVGSSFIDFFDITAGAIFVD
HLGAFMSSLGSPTWLVTIIAGGVGQGIQTVATFIPVIAALFLALSVLEGSGYMARAAFVVDGLMRRIGLPGRAFVPMIVG
FGCSVPAIMATRTLGSERERIVTGMMAPFMSCGARLPVYALFAAAFFPESGQNLVFLLYIIGIFAAIGTGLLLRSTLLPG
SSSAVVMELPSYEKPKFKTVMARTGKRTKSFIMGAGKTIVIVVTLLNFVNAIGIDGTFGHEDSSESVLSVASQKVTPLFA
PMGVEQDNWPATVGIITGIFAKEAVVGTLNSLYSDAGAGDEALAPISDTFGEALATIPENLFGISPDDPLSISVGDVSSV
EAASEELEVDTSTFGALQAGFAGVTAAFAYLLFILLYTPCVAAIGALVNEFGSRWATFAGLWTFGLAYGVATVFYQGATF
AQHPLQSSLWIGFFAIALVVFYLWLKKKGKKTQTIIPGIKVITE

Sequences:

>Translated_764_residues
MDKQFNCVTVGNPNAGKSTLFNALTGSNQQVGNWSGVTVEKKTGQFALQGSDVFLTDLPGIYDLLPAGNSCDCSLDEQIA
QQYLADQPIDGIINLVDATNIERHLYLTVQLRELGIPMVVVLNKIDAAVERGIHIDIAKMTEELGCPVVAVCSREPKDIE
KVKLQFVALLDGKVSEAPLVLDYDEEIESAVSNLLSQDPELSRGRALAMLANGLGCGKCKNSQMASEVELYSQALSSQGK
DIEIMIATTRFNYVEQVFTGSVQSDGAETFTDKLDKLVLHPIFGIPVFLFVMYLMFMFSINVGSSFIDFFDITAGAIFVD
HLGAFMSSLGSPTWLVTIIAGGVGQGIQTVATFIPVIAALFLALSVLEGSGYMARAAFVVDGLMRRIGLPGRAFVPMIVG
FGCSVPAIMATRTLGSERERIVTGMMAPFMSCGARLPVYALFAAAFFPESGQNLVFLLYIIGIFAAIGTGLLLRSTLLPG
SSSAVVMELPSYEKPKFKTVMARTGKRTKSFIMGAGKTIVIVVTLLNFVNAIGIDGTFGHEDSSESVLSVASQKVTPLFA
PMGVEQDNWPATVGIITGIFAKEAVVGTLNSLYSDAGAGDEALAPISDTFGEALATIPENLFGISPDDPLSISVGDVSSV
EAASEELEVDTSTFGALQAGFAGVTAAFAYLLFILLYTPCVAAIGALVNEFGSRWATFAGLWTFGLAYGVATVFYQGATF
AQHPLQSSLWIGFFAIALVVFYLWLKKKGKKTQTIIPGIKVITE
>Mature_764_residues
MDKQFNCVTVGNPNAGKSTLFNALTGSNQQVGNWSGVTVEKKTGQFALQGSDVFLTDLPGIYDLLPAGNSCDCSLDEQIA
QQYLADQPIDGIINLVDATNIERHLYLTVQLRELGIPMVVVLNKIDAAVERGIHIDIAKMTEELGCPVVAVCSREPKDIE
KVKLQFVALLDGKVSEAPLVLDYDEEIESAVSNLLSQDPELSRGRALAMLANGLGCGKCKNSQMASEVELYSQALSSQGK
DIEIMIATTRFNYVEQVFTGSVQSDGAETFTDKLDKLVLHPIFGIPVFLFVMYLMFMFSINVGSSFIDFFDITAGAIFVD
HLGAFMSSLGSPTWLVTIIAGGVGQGIQTVATFIPVIAALFLALSVLEGSGYMARAAFVVDGLMRRIGLPGRAFVPMIVG
FGCSVPAIMATRTLGSERERIVTGMMAPFMSCGARLPVYALFAAAFFPESGQNLVFLLYIIGIFAAIGTGLLLRSTLLPG
SSSAVVMELPSYEKPKFKTVMARTGKRTKSFIMGAGKTIVIVVTLLNFVNAIGIDGTFGHEDSSESVLSVASQKVTPLFA
PMGVEQDNWPATVGIITGIFAKEAVVGTLNSLYSDAGAGDEALAPISDTFGEALATIPENLFGISPDDPLSISVGDVSSV
EAASEELEVDTSTFGALQAGFAGVTAAFAYLLFILLYTPCVAAIGALVNEFGSRWATFAGLWTFGLAYGVATVFYQGATF
AQHPLQSSLWIGFFAIALVVFYLWLKKKGKKTQTIIPGIKVITE

Specific function: Fe(2+) uptake system, probably driven by GTP [H]

COG id: COG0370

COG function: function code P; Fe2+ transport system protein B

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the feoB (TC 9.A.8) family [H]

Homologues:

Organism=Escherichia coli, GI1789813, Length=745, Percent_Identity=41.744966442953, Blast_Score=534, Evalue=1e-153,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003373
- InterPro:   IPR011640
- InterPro:   IPR011619
- InterPro:   IPR011642
- InterPro:   IPR006073 [H]

Pfam domain/function: PF07664 FeoB_C; PF02421 FeoB_N; PF07670 Gate [H]

EC number: NA

Molecular weight: Translated: 81525; Mature: 81525

Theoretical pI: Translated: 4.49; Mature: 4.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKQFNCVTVGNPNAGKSTLFNALTGSNQQVGNWSGVTVEKKTGQFALQGSDVFLTDLPG
CCCCEEEEECCCCCCCHHHHHHHHCCCCCCCCCCCCEEEEECCCCEEEECCCEEEECCCC
IYDLLPAGNSCDCSLDEQIAQQYLADQPIDGIINLVDATNIERHLYLTVQLRELGIPMVV
HHHHCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEEEEEEHHHCCCCCEE
VLNKIDAAVERGIHIDIAKMTEELGCPVVAVCSREPKDIEKVKLQFVALLDGKVSEAPLV
HHHHHHHHHHCCCEEEHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHEECCCCCCCCEE
LDYDEEIESAVSNLLSQDPELSRGRALAMLANGLGCGKCKNSQMASEVELYSQALSSQGK
EECHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCC
DIEIMIATTRFNYVEQVFTGSVQSDGAETFTDKLDKLVLHPIFGIPVFLFVMYLMFMFSI
CEEEEEEECHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NVGSSFIDFFDITAGAIFVDHLGAFMSSLGSPTWLVTIIAGGVGQGIQTVATFIPVIAAL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHHH
FLALSVLEGSGYMARAAFVVDGLMRRIGLPGRAFVPMIVGFGCSVPAIMATRTLGSERER
HHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHCCCHHHH
IVTGMMAPFMSCGARLPVYALFAAAFFPESGQNLVFLLYIIGIFAAIGTGLLLRSTLLPG
HHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
SSSAVVMELPSYEKPKFKTVMARTGKRTKSFIMGAGKTIVIVVTLLNFVNAIGIDGTFGH
CCCEEEEECCCCCCCHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCC
EDSSESVLSVASQKVTPLFAPMGVEQDNWPATVGIITGIFAKEAVVGTLNSLYSDAGAGD
CCCHHHHHHHHHHCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
EALAPISDTFGEALATIPENLFGISPDDPLSISVGDVSSVEAASEELEVDTSTFGALQAG
CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCHHHHHHHHHHCCCHHHHHHHHHH
FAGVTAAFAYLLFILLYTPCVAAIGALVNEFGSRWATFAGLWTFGLAYGVATVFYQGATF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
AQHPLQSSLWIGFFAIALVVFYLWLKKKGKKTQTIIPGIKVITE
HHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCEECC
>Mature Secondary Structure
MDKQFNCVTVGNPNAGKSTLFNALTGSNQQVGNWSGVTVEKKTGQFALQGSDVFLTDLPG
CCCCEEEEECCCCCCCHHHHHHHHCCCCCCCCCCCCEEEEECCCCEEEECCCEEEECCCC
IYDLLPAGNSCDCSLDEQIAQQYLADQPIDGIINLVDATNIERHLYLTVQLRELGIPMVV
HHHHCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEEEEEEHHHCCCCCEE
VLNKIDAAVERGIHIDIAKMTEELGCPVVAVCSREPKDIEKVKLQFVALLDGKVSEAPLV
HHHHHHHHHHCCCEEEHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHEECCCCCCCCEE
LDYDEEIESAVSNLLSQDPELSRGRALAMLANGLGCGKCKNSQMASEVELYSQALSSQGK
EECHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCC
DIEIMIATTRFNYVEQVFTGSVQSDGAETFTDKLDKLVLHPIFGIPVFLFVMYLMFMFSI
CEEEEEEECHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NVGSSFIDFFDITAGAIFVDHLGAFMSSLGSPTWLVTIIAGGVGQGIQTVATFIPVIAAL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHHH
FLALSVLEGSGYMARAAFVVDGLMRRIGLPGRAFVPMIVGFGCSVPAIMATRTLGSERER
HHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHCCCHHHH
IVTGMMAPFMSCGARLPVYALFAAAFFPESGQNLVFLLYIIGIFAAIGTGLLLRSTLLPG
HHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
SSSAVVMELPSYEKPKFKTVMARTGKRTKSFIMGAGKTIVIVVTLLNFVNAIGIDGTFGH
CCCEEEEECCCCCCCHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCC
EDSSESVLSVASQKVTPLFAPMGVEQDNWPATVGIITGIFAKEAVVGTLNSLYSDAGAGD
CCCHHHHHHHHHHCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
EALAPISDTFGEALATIPENLFGISPDDPLSISVGDVSSVEAASEELEVDTSTFGALQAG
CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCHHHHHHHHHHCCCHHHHHHHHHH
FAGVTAAFAYLLFILLYTPCVAAIGALVNEFGSRWATFAGLWTFGLAYGVATVFYQGATF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
AQHPLQSSLWIGFFAIALVVFYLWLKKKGKKTQTIIPGIKVITE
HHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Fe (II) [Periplasm] [C]

Specific reaction: Fe (II) [Periplasm] = Fe (II) [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA