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The map label for this gene is pspC [H]

Identifier: 167624672

GI number: 167624672

Start: 3343403

End: 3343795

Strand: Reverse

Name: pspC [H]

Synonym: Shal_2754

Alternate gene names: 167624672

Gene position: 3343795-3343403 (Counterclockwise)

Preceding gene: 167624673

Following gene: 167624671

Centisome position: 63.97

GC content: 38.42

Gene sequence:

>393_bases
ATGAACGAAGGCAATAGAACGTTATATCGAATTCCTCAGTCAGGTAAAATAGCGGGTGTTTGCGCAGGCATTGCAGATTA
CTTTAATTTTGAAACTTGGTTAGTTAGAGTGTTAGCCGCTTCAATTTTCTTATTGGGTGGCTCAGGGATTGTACTGATTA
TCTATGTGTTGCTTTGGATGATTTTGGATATCAAACCTGGCACTGGTAAAAACGAGCTTTCAAACAAAGAAATTGGACTA
AAGAAGAAGATTTGGCAGTCGGGTGAGCCAGCTAAAATGGCATTAAGGGACGTAAATAGCCAGTTTAGATCGTTAGAAGT
GAGGTTACAAAACCTTGAACGTCACGTCACTTCCGACAATTATGATCTTAAAGATCAAATCAACAATTTATAG

Upstream 100 bases:

>100_bases
GTGAGGCACCGCAGTGGAGGAGTCGAAATGATTAAACAACATCGACTCAATACTGTAGACAAGTATCACTATTTAATTAA
ATAACAAGGAGGAAGTAGAG

Downstream 100 bases:

>100_bases
ATGAATCATCTATAGCGAATCATCTATCAGTTCGATGACGGGGCAGGCTATACTGCCCTAGAACCTTCTCAAACGAGTTT
TACTTCATTTTATGGTAAGT

Product: phage shock protein C

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 130; Mature: 130

Protein sequence:

>130_residues
MNEGNRTLYRIPQSGKIAGVCAGIADYFNFETWLVRVLAASIFLLGGSGIVLIIYVLLWMILDIKPGTGKNELSNKEIGL
KKKIWQSGEPAKMALRDVNSQFRSLEVRLQNLERHVTSDNYDLKDQINNL

Sequences:

>Translated_130_residues
MNEGNRTLYRIPQSGKIAGVCAGIADYFNFETWLVRVLAASIFLLGGSGIVLIIYVLLWMILDIKPGTGKNELSNKEIGL
KKKIWQSGEPAKMALRDVNSQFRSLEVRLQNLERHVTSDNYDLKDQINNL
>Mature_130_residues
MNEGNRTLYRIPQSGKIAGVCAGIADYFNFETWLVRVLAASIFLLGGSGIVLIIYVLLWMILDIKPGTGKNELSNKEIGL
KKKIWQSGEPAKMALRDVNSQFRSLEVRLQNLERHVTSDNYDLKDQINNL

Specific function: The phage shock protein (psp) operon (pspABCDE) may play a significant role in the competition for survival under nutrient- or energy-limited conditions. PspC is involved in transcription regulation [H]

COG id: COG1983

COG function: function code KT; Putative stress-responsive transcriptional regulator

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PspC family [H]

Homologues:

Organism=Escherichia coli, GI1787564, Length=126, Percent_Identity=33.3333333333333, Blast_Score=76, Evalue=8e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007168
- InterPro:   IPR014320 [H]

Pfam domain/function: PF04024 PspC [H]

EC number: NA

Molecular weight: Translated: 14667; Mature: 14667

Theoretical pI: Translated: 9.49; Mature: 9.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNEGNRTLYRIPQSGKIAGVCAGIADYFNFETWLVRVLAASIFLLGGSGIVLIIYVLLWM
CCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
ILDIKPGTGKNELSNKEIGLKKKIWQSGEPAKMALRDVNSQFRSLEVRLQNLERHVTSDN
HHHCCCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
YDLKDQINNL
CCHHHHHCCC
>Mature Secondary Structure
MNEGNRTLYRIPQSGKIAGVCAGIADYFNFETWLVRVLAASIFLLGGSGIVLIIYVLLWM
CCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
ILDIKPGTGKNELSNKEIGLKKKIWQSGEPAKMALRDVNSQFRSLEVRLQNLERHVTSDN
HHHCCCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
YDLKDQINNL
CCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]