| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is pspB [C]
Identifier: 167624673
GI number: 167624673
Start: 3343861
End: 3344088
Strand: Reverse
Name: pspB [C]
Synonym: Shal_2755
Alternate gene names: 167624673
Gene position: 3344088-3343861 (Counterclockwise)
Preceding gene: 167624674
Following gene: 167624672
Centisome position: 63.98
GC content: 39.04
Gene sequence:
>228_bases ATGGATATTTTGATGGCCCCAATTATTATTTTTTTAATATTTGTGGCTCCAATATGGCTAATACTTTATTACCGCAGTAA GAAACAGGTTAGCCAGGGACTTACTGAAGAAGAGTTTAGCCAGTTAAATGAGTTGATTGCCAAAGCTGATAAGATGTCAC ATCGCATCGAGACCTTAGAAGCAATCTTAGACAGTGAGGCACCGCAGTGGAGGAGTCGAAATGATTAA
Upstream 100 bases:
>100_bases GAAGATTCAGTTAACGCTGAGCTTGAAGCGCTTAAGGCAAAAATGAAGGGAAGCAAAACTAAAGCTAAGTAATAAATGAG ATCAGAGGTGAGTTATGAAC
Downstream 100 bases:
>100_bases ACAACATCGACTCAATACTGTAGACAAGTATCACTATTTAATTAAATAACAAGGAGGAAGTAGAGATGAACGAAGGCAAT AGAACGTTATATCGAATTCC
Product: phage shock protein B
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 75; Mature: 75
Protein sequence:
>75_residues MDILMAPIIIFLIFVAPIWLILYYRSKKQVSQGLTEEEFSQLNELIAKADKMSHRIETLEAILDSEAPQWRSRND
Sequences:
>Translated_75_residues MDILMAPIIIFLIFVAPIWLILYYRSKKQVSQGLTEEEFSQLNELIAKADKMSHRIETLEAILDSEAPQWRSRND >Mature_75_residues MDILMAPIIIFLIFVAPIWLILYYRSKKQVSQGLTEEEFSQLNELIAKADKMSHRIETLEAILDSEAPQWRSRND
Specific function: The Phage Shock Protein (Psp) Operon (Pspabce) May Play A Significant Role In The Competition For Survival Under Nutrient- Or Energy-Limited Conditions. Pspb Is Involved In Transcription Regulation. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Inner Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787563, Length=71, Percent_Identity=43.6619718309859, Blast_Score=63, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8779; Mature: 8779
Theoretical pI: Translated: 4.70; Mature: 4.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDILMAPIIIFLIFVAPIWLILYYRSKKQVSQGLTEEEFSQLNELIAKADKMSHRIETLE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH AILDSEAPQWRSRND HHHCCCCCCCCCCCC >Mature Secondary Structure MDILMAPIIIFLIFVAPIWLILYYRSKKQVSQGLTEEEFSQLNELIAKADKMSHRIETLE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH AILDSEAPQWRSRND HHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA