Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is yibL [H]

Identifier: 167624608

GI number: 167624608

Start: 3262844

End: 3263200

Strand: Reverse

Name: yibL [H]

Synonym: Shal_2690

Alternate gene names: 167624608

Gene position: 3263200-3262844 (Counterclockwise)

Preceding gene: 167624609

Following gene: 167624607

Centisome position: 62.43

GC content: 42.86

Gene sequence:

>357_bases
ATGAATTTAAAGCAGGAGCTGCAAACGCTCAACGATAAGTTAGACAAATTTCGTCGTAAGCTAGCAGCAGCTGAAAAGCG
TGCTGATCCTACAATTGTGATGCAGTTTAAAAAAGAAATTGCAGCTGTTACTAAGCGGATTAGCGCTGTTAAAGGTCAAC
AGACTCGTGAGCTAAGCAAAGAAGGCAGTACAGTTGTTGGCCTTAAGTTTAGCCGTGTATTGACTAAAGCCGAGCAAGCA
GACATGGGCAAGCTTAAAAAGTCAGTTAAAGGTTTAGTTGTGGTGCACCCAATGACGGCATTAGGTCGTGAAATGGGGAT
CAAGCAAGTCACAGGCTTTGCACCAAAAGAGTTTTAA

Upstream 100 bases:

>100_bases
ATACTGTTATAATGTGGCAATAATGGCAAAACAGCGTCAGTTAACTGAGGCTGTTTTTGTTTCTAAACGTGTTAATTAGA
TTTGAATTTAAGGTCTGTAA

Downstream 100 bases:

>100_bases
CTGCTTTTAGTTATTGATTTAGTGAGCCGCTTCAAGGTTATCTTTAAGCGCTGGGCTTATGCTTGCTCAAGTTAAGTCTA
TGGCGGATTAGAGAACACTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 118; Mature: 118

Protein sequence:

>118_residues
MNLKQELQTLNDKLDKFRRKLAAAEKRADPTIVMQFKKEIAAVTKRISAVKGQQTRELSKEGSTVVGLKFSRVLTKAEQA
DMGKLKKSVKGLVVVHPMTALGREMGIKQVTGFAPKEF

Sequences:

>Translated_118_residues
MNLKQELQTLNDKLDKFRRKLAAAEKRADPTIVMQFKKEIAAVTKRISAVKGQQTRELSKEGSTVVGLKFSRVLTKAEQA
DMGKLKKSVKGLVVVHPMTALGREMGIKQVTGFAPKEF
>Mature_118_residues
MNLKQELQTLNDKLDKFRRKLAAAEKRADPTIVMQFKKEIAAVTKRISAVKGQQTRELSKEGSTVVGLKFSRVLTKAEQA
DMGKLKKSVKGLVVVHPMTALGREMGIKQVTGFAPKEF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790030, Length=121, Percent_Identity=46.2809917355372, Blast_Score=101, Evalue=1e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021230 [H]

Pfam domain/function: PF10928 DUF2810 [H]

EC number: NA

Molecular weight: Translated: 13128; Mature: 13128

Theoretical pI: Translated: 11.07; Mature: 11.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLKQELQTLNDKLDKFRRKLAAAEKRADPTIVMQFKKEIAAVTKRISAVKGQQTRELSK
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
EGSTVVGLKFSRVLTKAEQADMGKLKKSVKGLVVVHPMTALGREMGIKQVTGFAPKEF
CCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCHHHHHHHHCHHHHHCCCCCCC
>Mature Secondary Structure
MNLKQELQTLNDKLDKFRRKLAAAEKRADPTIVMQFKKEIAAVTKRISAVKGQQTRELSK
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
EGSTVVGLKFSRVLTKAEQADMGKLKKSVKGLVVVHPMTALGREMGIKQVTGFAPKEF
CCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCHHHHHHHHCHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]