| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is 167624577
Identifier: 167624577
GI number: 167624577
Start: 3222844
End: 3223965
Strand: Reverse
Name: 167624577
Synonym: Shal_2658
Alternate gene names: NA
Gene position: 3223965-3222844 (Counterclockwise)
Preceding gene: 167624578
Following gene: 167624576
Centisome position: 61.68
GC content: 49.38
Gene sequence:
>1122_bases GTGGGAAAGTTTCGTCTCGGGTTAATTATTAATCCACTTGCAGGCCTTGGCGGTAGTGTCGGCCTAAAAGGCAGTGATGG GGTAGCTTCAGAGGCGATAGCCAAAGGAGCCGTGCCTAAGGCGGATCTTAGAATGCAGCAAGCGCTTACCGTTATCGAAC CTTATAAAGCGCGTATTGAGGTGATAACAGCCTCAGGTGATATGGGAGAGAAGCTTGCGAAAGAGATGGGTTTTACTACT CGAGTGGTATACCAAGCGCCGAGTGAGACTGGGGCTCAAGACACTCAAAAAGTAGTCAGTGAGCTATTGAATGAAACGTT AGATTTGTTGCTATTTGCTGGTGGTGACGGTACCGCGCGAGATGTGTATGCCATCGCCGACGACAACATTCCCGTGTTAG GCGTACCTGCAGGCGTTAAAATTCACTCTGGTGTATACGGTATTACCCCTCATGCGTCAGGTATGGTGGTGAAAATGCTA CTCGACGGTGATTTAGTCAGCTTAATGAGCGCCGATGTGATGGATATCGACGAGATTGCGTTTAGAGACGGTGTGGTGCG CGCGCGCCGCTTTGGCGAAATGTTAGTGCCTGCCGAGCCAAGATACGTGCAAGCGGTTAAAATGGGCGGTAAAGAGAGCG ATGAGCTGGTGCTTGCCGATATAGCTGCAGAAGCGATTGAGCAGATGGAAGATAACCTCTGCATCATGGGGTCGGGTAGC ACCGTTGCCGCGGTGATGAGTGAGTTAGCGCTTGATAACACCCTGCTAGGTGTCGACGTTATTCAAGATGAGGCCTTAGT TGCCAGCGACTTGTCTGCCAGCGAACTTCTACAGCTCTCAGAAAACAAAGCGCTAAAGCTGTTCATTACGTTAATTGGCG GTCAAGGACATATCTTGGGGCGGGGCAACCAGCAGCTCAGTCCCGAGCTGATAAGGCGTGTAGGAAAAGACAATATTGTT ATCCTAGCGACAAAAACAAAGCTAAAAGCACTTGAAGGTAGGCCGTTAATTGTGGATAGTGGCGACCCTGAATTAGATAA AGCGCTAACGGGTTACTATAAAGTGATCACGGGTTATCATGATTACGTGATGTATCAGGTTGCAAACCCGGACTTGGCAT AA
Upstream 100 bases:
>100_bases GGCTGCGCATTTTTATCTATGCTAGCCGTGTTATTCATTCCTAAAGCACAGGCATAGACTACTTAGTAGTGAAAGTTAGC GTCAAAATGGAGTATTGATT
Downstream 100 bases:
>100_bases CAAAGAGTGTTCATCAAGTCGGTCTTTAAATTGCAGACTGAACGATCTCTGGCTATTAATATATATCGTCTGATGTGAAA ATTTATCTAAACGTTTTGAC
Product: ATP-NAD/AcoX kinase
Products: NA
Alternate protein names: ATP-NAD Kinase; NAD(+)/NADH Kinase; Inorganic Polyphosphate/ATP-NAD Kinase; Homolog NAD Kinase
Number of amino acids: Translated: 373; Mature: 372
Protein sequence:
>373_residues MGKFRLGLIINPLAGLGGSVGLKGSDGVASEAIAKGAVPKADLRMQQALTVIEPYKARIEVITASGDMGEKLAKEMGFTT RVVYQAPSETGAQDTQKVVSELLNETLDLLLFAGGDGTARDVYAIADDNIPVLGVPAGVKIHSGVYGITPHASGMVVKML LDGDLVSLMSADVMDIDEIAFRDGVVRARRFGEMLVPAEPRYVQAVKMGGKESDELVLADIAAEAIEQMEDNLCIMGSGS TVAAVMSELALDNTLLGVDVIQDEALVASDLSASELLQLSENKALKLFITLIGGQGHILGRGNQQLSPELIRRVGKDNIV ILATKTKLKALEGRPLIVDSGDPELDKALTGYYKVITGYHDYVMYQVANPDLA
Sequences:
>Translated_373_residues MGKFRLGLIINPLAGLGGSVGLKGSDGVASEAIAKGAVPKADLRMQQALTVIEPYKARIEVITASGDMGEKLAKEMGFTT RVVYQAPSETGAQDTQKVVSELLNETLDLLLFAGGDGTARDVYAIADDNIPVLGVPAGVKIHSGVYGITPHASGMVVKML LDGDLVSLMSADVMDIDEIAFRDGVVRARRFGEMLVPAEPRYVQAVKMGGKESDELVLADIAAEAIEQMEDNLCIMGSGS TVAAVMSELALDNTLLGVDVIQDEALVASDLSASELLQLSENKALKLFITLIGGQGHILGRGNQQLSPELIRRVGKDNIV ILATKTKLKALEGRPLIVDSGDPELDKALTGYYKVITGYHDYVMYQVANPDLA >Mature_372_residues GKFRLGLIINPLAGLGGSVGLKGSDGVASEAIAKGAVPKADLRMQQALTVIEPYKARIEVITASGDMGEKLAKEMGFTTR VVYQAPSETGAQDTQKVVSELLNETLDLLLFAGGDGTARDVYAIADDNIPVLGVPAGVKIHSGVYGITPHASGMVVKMLL DGDLVSLMSADVMDIDEIAFRDGVVRARRFGEMLVPAEPRYVQAVKMGGKESDELVLADIAAEAIEQMEDNLCIMGSGST VAAVMSELALDNTLLGVDVIQDEALVASDLSASELLQLSENKALKLFITLIGGQGHILGRGNQQLSPELIRRVGKDNIVI LATKTKLKALEGRPLIVDSGDPELDKALTGYYKVITGYHDYVMYQVANPDLA
Specific function: Unknown
COG id: COG3199
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39553; Mature: 39422
Theoretical pI: Translated: 4.47; Mature: 4.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKFRLGLIINPLAGLGGSVGLKGSDGVASEAIAKGAVPKADLRMQQALTVIEPYKARIE CCCEEEEEEECCHHCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEEE VITASGDMGEKLAKEMGFTTRVVYQAPSETGAQDTQKVVSELLNETLDLLLFAGGDGTAR EEEECCCHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHEEEEEEECCCCCCC DVYAIADDNIPVLGVPAGVKIHSGVYGITPHASGMVVKMLLDGDLVSLMSADVMDIDEIA EEEEEECCCCCEEECCCCCEEECCEEEECCCCCCEEEEEEECCCHHHHHHCCCCCHHHHH FRDGVVRARRFGEMLVPAEPRYVQAVKMGGKESDELVLADIAAEAIEQMEDNLCIMGSGS HHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCCEEEHHHHHHHHHHHHCCEEEEECCC TVAAVMSELALDNTLLGVDVIQDEALVASDLSASELLQLSENKALKLFITLIGGQGHILG HHHHHHHHHHHCCCEEEEEEECCCHHHHCCCCHHHHHHHCCCCEEEEEEEEECCCEEEEE RGNQQLSPELIRRVGKDNIVILATKTKLKALEGRPLIVDSGDPELDKALTGYYKVITGYH CCCCCCCHHHHHHCCCCCEEEEEECHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHCCCC DYVMYQVANPDLA EEEEEEECCCCCC >Mature Secondary Structure GKFRLGLIINPLAGLGGSVGLKGSDGVASEAIAKGAVPKADLRMQQALTVIEPYKARIE CCEEEEEEECCHHCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEEE VITASGDMGEKLAKEMGFTTRVVYQAPSETGAQDTQKVVSELLNETLDLLLFAGGDGTAR EEEECCCHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHEEEEEEECCCCCCC DVYAIADDNIPVLGVPAGVKIHSGVYGITPHASGMVVKMLLDGDLVSLMSADVMDIDEIA EEEEEECCCCCEEECCCCCEEECCEEEECCCCCCEEEEEEECCCHHHHHHCCCCCHHHHH FRDGVVRARRFGEMLVPAEPRYVQAVKMGGKESDELVLADIAAEAIEQMEDNLCIMGSGS HHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCCEEEHHHHHHHHHHHHCCEEEEECCC TVAAVMSELALDNTLLGVDVIQDEALVASDLSASELLQLSENKALKLFITLIGGQGHILG HHHHHHHHHHHCCCEEEEEEECCCHHHHCCCCHHHHHHHCCCCEEEEEEEEECCCEEEEE RGNQQLSPELIRRVGKDNIVILATKTKLKALEGRPLIVDSGDPELDKALTGYYKVITGYH CCCCCCCHHHHHHCCCCCEEEEEECHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHCCCC DYVMYQVANPDLA EEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA