Click here to switch to the map view.

The map label for this gene is hcaT [H]

Identifier: 167624578

GI number: 167624578

Start: 3224009

End: 3225163

Strand: Reverse

Name: hcaT [H]

Synonym: Shal_2659

Alternate gene names: 167624578

Gene position: 3225163-3224009 (Counterclockwise)

Preceding gene: 167624579

Following gene: 167624577

Centisome position: 61.7

GC content: 47.01

Gene sequence:

>1155_bases
ATGTTTCAACCCAAAAGCACAGAGCAGCAACTGCGCTGGCTCTGTGCATGTTATTTCTTTTTCTTTTCTATTCTTGGCAT
TATGGTGCCTTATCTTGGCGTTTTTTTTGATAGCCGTGGTTTTGACGCCCAAGAAATAGGCTTCTTGCTTGCAATCTTAA
TGGGCACGCGGATTATCGCACCGAACTTATGGGCCATCGTTGCCGATAAAACCGGTATGCGCTCCGAACTCATTAAGATT
GGTGCCGGCGCCGCAGCATTAAGTTATCTCACTTTTTTCTATGACGGCGGCCTCGCTTACTTAGCGATTAGCCTAGCGGT
ATATACCTTTTTCTGGAACGCCATACTAGCTCAGCTCGAGGTTATCACTCTTGAAACCTTAGGTGATGACGCTAATCGCT
ACGGTGCGATTAGAAGTTGGGGCAGTGTTGGTTATATCGTACTGGTTGTCAGCGGCGGTTTTGCTATTGGGCACTGGGGG
CCACAGATTTTACCCTATATTGGCATGACGCTATTTATCGGTATGCTTATTAGCGCACTGCCATTACCGTCTAATCGAGC
CGTTGTCGATAACACTCAAATACGTAAGCCACTGGTCTTCGATAAAGCCTTAATCTGGTTTTTAGTGTCAGCTATGTTAC
TACAGATGAGTGCTGGGCCATTTTATGGTTTCTTCGTTCTGTATTTAAAGCAGGCTGGCTACTCTGAATCTGCTGCCGGT
ATTTTTGTCGCGCTGGGTGTGGTGGCTGAAATCGTCATGTTTATGTACGCCCCTAAATTATTGGGTCGCTTTGGGGTGAA
GTTTTTGCTGGTGGTGAGCATCGGCTTAACCGCCGTTCGCTGGCTATTACTCGCTTATGGTGTTGAGAACATCTTATACC
TGAGTATTAGCCAACTATTACATGCCTTTACTTTTGGCTTAACCCATGCGGCATCGATTCAGTTTGTACACAAGCATTTT
GATATTAGCCGCCGAAGCCAAGGGCAGGCGTTATATGCGAGCTTAAGCTTTGGCGTGGGTGGGGCAATAGGGACTTGGCT
ATGTGGCATTATCTGGGGTGATGGCTCCGGCGCCATGTCCACTTGGATCTTTGCCGCAGGCTGCGCATTTTTATCTATGC
TAGCCGTGTTATTCATTCCTAAAGCACAGGCATAG

Upstream 100 bases:

>100_bases
CAGAAGCCATGCTAGCAATCGTATTGATGGATCACCTTTTACGTCACCGCGCGCAAAATATGGATGTGAATAGCAGTACA
CCTATTATCGGAATGCGTTA

Downstream 100 bases:

>100_bases
ACTACTTAGTAGTGAAAGTTAGCGTCAAAATGGAGTATTGATTGTGGGAAAGTTTCGTCTCGGGTTAATTATTAATCCAC
TTGCAGGCCTTGGCGGTAGT

Product: major facilitator transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 384; Mature: 384

Protein sequence:

>384_residues
MFQPKSTEQQLRWLCACYFFFFSILGIMVPYLGVFFDSRGFDAQEIGFLLAILMGTRIIAPNLWAIVADKTGMRSELIKI
GAGAAALSYLTFFYDGGLAYLAISLAVYTFFWNAILAQLEVITLETLGDDANRYGAIRSWGSVGYIVLVVSGGFAIGHWG
PQILPYIGMTLFIGMLISALPLPSNRAVVDNTQIRKPLVFDKALIWFLVSAMLLQMSAGPFYGFFVLYLKQAGYSESAAG
IFVALGVVAEIVMFMYAPKLLGRFGVKFLLVVSIGLTAVRWLLLAYGVENILYLSISQLLHAFTFGLTHAASIQFVHKHF
DISRRSQGQALYASLSFGVGGAIGTWLCGIIWGDGSGAMSTWIFAAGCAFLSMLAVLFIPKAQA

Sequences:

>Translated_384_residues
MFQPKSTEQQLRWLCACYFFFFSILGIMVPYLGVFFDSRGFDAQEIGFLLAILMGTRIIAPNLWAIVADKTGMRSELIKI
GAGAAALSYLTFFYDGGLAYLAISLAVYTFFWNAILAQLEVITLETLGDDANRYGAIRSWGSVGYIVLVVSGGFAIGHWG
PQILPYIGMTLFIGMLISALPLPSNRAVVDNTQIRKPLVFDKALIWFLVSAMLLQMSAGPFYGFFVLYLKQAGYSESAAG
IFVALGVVAEIVMFMYAPKLLGRFGVKFLLVVSIGLTAVRWLLLAYGVENILYLSISQLLHAFTFGLTHAASIQFVHKHF
DISRRSQGQALYASLSFGVGGAIGTWLCGIIWGDGSGAMSTWIFAAGCAFLSMLAVLFIPKAQA
>Mature_384_residues
MFQPKSTEQQLRWLCACYFFFFSILGIMVPYLGVFFDSRGFDAQEIGFLLAILMGTRIIAPNLWAIVADKTGMRSELIKI
GAGAAALSYLTFFYDGGLAYLAISLAVYTFFWNAILAQLEVITLETLGDDANRYGAIRSWGSVGYIVLVVSGGFAIGHWG
PQILPYIGMTLFIGMLISALPLPSNRAVVDNTQIRKPLVFDKALIWFLVSAMLLQMSAGPFYGFFVLYLKQAGYSESAAG
IFVALGVVAEIVMFMYAPKLLGRFGVKFLLVVSIGLTAVRWLLLAYGVENILYLSISQLLHAFTFGLTHAASIQFVHKHF
DISRRSQGQALYASLSFGVGGAIGTWLCGIIWGDGSGAMSTWIFAAGCAFLSMLAVLFIPKAQA

Specific function: Probable permease involved in the uptake of 3- phenylpropionic acid [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lacY/rafB permease family. HcaT subfamily [H]

Homologues:

Organism=Escherichia coli, GI1788886, Length=347, Percent_Identity=26.5129682997118, Blast_Score=97, Evalue=2e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022814
- InterPro:   IPR016196
- InterPro:   IPR005276 [H]

Pfam domain/function: PF01306 LacY_symp [H]

EC number: NA

Molecular weight: Translated: 41932; Mature: 41932

Theoretical pI: Translated: 8.77; Mature: 8.77

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFQPKSTEQQLRWLCACYFFFFSILGIMVPYLGVFFDSRGFDAQEIGFLLAILMGTRIIA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHCC
PNLWAIVADKTGMRSELIKIGAGAAALSYLTFFYDGGLAYLAISLAVYTFFWNAILAQLE
CCCEEEEECCCCHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
VITLETLGDDANRYGAIRSWGSVGYIVLVVSGGFAIGHWGPQILPYIGMTLFIGMLISAL
HHEEECCCCCHHHHCCHHCCCCCCEEEEEEECCEEEECCCHHHHHHHHHHHHHHHHHHHC
PLPSNRAVVDNTQIRKPLVFDKALIWFLVSAMLLQMSAGPFYGFFVLYLKQAGYSESAAG
CCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHH
IFVALGVVAEIVMFMYAPKLLGRFGVKFLLVVSIGLTAVRWLLLAYGVENILYLSISQLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HAFTFGLTHAASIQFVHKHFDISRRSQGQALYASLSFGVGGAIGTWLCGIIWGDGSGAMS
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCHHHHHHHHHHEEECCCCHHH
TWIFAAGCAFLSMLAVLFIPKAQA
HHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MFQPKSTEQQLRWLCACYFFFFSILGIMVPYLGVFFDSRGFDAQEIGFLLAILMGTRIIA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHCC
PNLWAIVADKTGMRSELIKIGAGAAALSYLTFFYDGGLAYLAISLAVYTFFWNAILAQLE
CCCEEEEECCCCHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
VITLETLGDDANRYGAIRSWGSVGYIVLVVSGGFAIGHWGPQILPYIGMTLFIGMLISAL
HHEEECCCCCHHHHCCHHCCCCCCEEEEEEECCEEEECCCHHHHHHHHHHHHHHHHHHHC
PLPSNRAVVDNTQIRKPLVFDKALIWFLVSAMLLQMSAGPFYGFFVLYLKQAGYSESAAG
CCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHH
IFVALGVVAEIVMFMYAPKLLGRFGVKFLLVVSIGLTAVRWLLLAYGVENILYLSISQLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HAFTFGLTHAASIQFVHKHFDISRRSQGQALYASLSFGVGGAIGTWLCGIIWGDGSGAMS
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCHHHHHHHHHHEEECCCCHHH
TWIFAAGCAFLSMLAVLFIPKAQA
HHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9603882; 9205837; 9278503 [H]