Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is yfcL [C]

Identifier: 167624576

GI number: 167624576

Start: 3222421

End: 3222690

Strand: Reverse

Name: yfcL [C]

Synonym: Shal_2657

Alternate gene names: 167624576

Gene position: 3222690-3222421 (Counterclockwise)

Preceding gene: 167624577

Following gene: 167624575

Centisome position: 61.66

GC content: 44.81

Gene sequence:

>270_bases
ATGATTGAGAAGTATGAGCAAACACTACAAGACTGGATTGAGAGCATTGTTGCCGAAGGCGATGATGACGCGTTATTCGC
AAGTGGTTATTTACAAGGTCACTTTGCTGTTGTGTTGTCACAGCTAGAAGTTGAGACTGAGCAGGGGCTAAGCGCGTTAG
AAGCTAAGATGACCGAGTGTTTGCTGCTTGCGAGAGAAGAGTTGAGTGACAGTGACTATGCACTGGTAAATGATGCTTGG
GCTCAATTGAGTGTAAAATTAGCGGCATAA

Upstream 100 bases:

>100_bases
TATTAATATATATCGTCTGATGTGAAAATTTATCTAAACGTTTTGACTAGATGGCGAAAGTGTCGACAGCTAGTCCATAA
TAAAAAATGCGGAGCCCTCG

Downstream 100 bases:

>100_bases
GTACTTTTCTTAAGTGTTCTATATCGGTATTAAGCGTTAAATGTATAGGTTAATGAGAGTTTAAGCTTTTATGAGTATGA
GTAGTTTTGTTGCAATTGGC

Product: YfcL protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 89; Mature: 89

Protein sequence:

>89_residues
MIEKYEQTLQDWIESIVAEGDDDALFASGYLQGHFAVVLSQLEVETEQGLSALEAKMTECLLLAREELSDSDYALVNDAW
AQLSVKLAA

Sequences:

>Translated_89_residues
MIEKYEQTLQDWIESIVAEGDDDALFASGYLQGHFAVVLSQLEVETEQGLSALEAKMTECLLLAREELSDSDYALVNDAW
AQLSVKLAA
>Mature_89_residues
MIEKYEQTLQDWIESIVAEGDDDALFASGYLQGHFAVVLSQLEVETEQGLSALEAKMTECLLLAREELSDSDYALVNDAW
AQLSVKLAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9839; Mature: 9839

Theoretical pI: Translated: 3.66; Mature: 3.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEKYEQTLQDWIESIVAEGDDDALFASGYLQGHFAVVLSQLEVETEQGLSALEAKMTEC
CCCHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLLAREELSDSDYALVNDAWAQLSVKLAA
HHHHHHHCCCCCCHHHHHHHHHHEEEECC
>Mature Secondary Structure
MIEKYEQTLQDWIESIVAEGDDDALFASGYLQGHFAVVLSQLEVETEQGLSALEAKMTEC
CCCHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLLAREELSDSDYALVNDAWAQLSVKLAA
HHHHHHHCCCCCCHHHHHHHHHHEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA