Click here to switch to the map view.

The map label for this gene is trpH [H]

Identifier: 167624540

GI number: 167624540

Start: 3179008

End: 3179886

Strand: Reverse

Name: trpH [H]

Synonym: Shal_2619

Alternate gene names: 167624540

Gene position: 3179886-3179008 (Counterclockwise)

Preceding gene: 167624541

Following gene: 167624539

Centisome position: 60.84

GC content: 46.53

Gene sequence:

>879_bases
ATGGCCATGAAAGATGAAAATACCACAGACTGTATATTGGTTGACTTGCACAGCCACACGACCGCATCCGATGGTCAACT
AACCCCATCAGAATTAATAGCGCGCGCGATAAGTAAAGGCGTGCAGATATTTGCCATTACCGATCACGACACCACAGATG
GCTTAAAAGAGGCACATGAGTTTAATCAGGCACATGAGACCCCATTAGCACTTATTAACGGCGTTGAGATCTCAACTCGT
TGGAATAATTTTGATATTCACATCGTGGCACTCAATGTTGATACCGATAATGTCGACTTGGCCGCATTTTTACACAATCA
ACGTGAGTTACGATCGAGCCGAGCCCAAGAGATTGGTGAGCGCTTAGCAAAGGCGGGTATAGAGGGCGCCTATGATGGCG
CAAAAGCTTATGCTGGTGAAGCGGCGATTAGCCGAGGACACTACGCGCGTTGGTTAGCAGAAAAAGGGTACGCTACCAAT
ACTGCCAATGTATTTAAAAAGTATTTAGCTCGTGGAAAGACGGGATATGTTCCCAATAACTGGGGCGACATGGCCAGCGC
GATTGAGATTATTCATCGAGCCGGTGGCGTCTCTGTATTGGCGCATCCGAGCGGTTATAAATTGTCGGCTAAATGGCTTA
AGCGCTTAGTGCGTGAATATAAAGAGGCTGGCGGTGATGCGATGGAAGTGGTGTTAGGCCAGCAGACCATAGATGATCGC
AATAATCTTATCTCGCTAAGTATCCAAAATGGGCTGACATGCTCGTTAGGCAGTGATTTTCACTTTCCTGGCAGCTGGAT
TGAAATTGGTAAAAATATGTTCCAACCCCAAGGAGTGAACTGGGTTTGGCAATCAGAGAAATGGAAGGTAGTACAATGA

Upstream 100 bases:

>100_bases
GCTTTCCCTTCTAGGCTGTATTTTGAGTTAGAGTTTGAGTTAGATTTAATGACCAAAAACCGGATTAAAATCACCTTTAA
TCGGTAAACTCAAGTATCAT

Downstream 100 bases:

>100_bases
GTCAGTTTTTTTATGTGCATGAGGAAAACCCTCAAACGCGCTTAATTAGCCAAGCTGTGAACGTGATTAAAAGCGGTGGT
GTGATTGTGTATCCAACCGA

Product: phosphotransferase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 292; Mature: 291

Protein sequence:

>292_residues
MAMKDENTTDCILVDLHSHTTASDGQLTPSELIARAISKGVQIFAITDHDTTDGLKEAHEFNQAHETPLALINGVEISTR
WNNFDIHIVALNVDTDNVDLAAFLHNQRELRSSRAQEIGERLAKAGIEGAYDGAKAYAGEAAISRGHYARWLAEKGYATN
TANVFKKYLARGKTGYVPNNWGDMASAIEIIHRAGGVSVLAHPSGYKLSAKWLKRLVREYKEAGGDAMEVVLGQQTIDDR
NNLISLSIQNGLTCSLGSDFHFPGSWIEIGKNMFQPQGVNWVWQSEKWKVVQ

Sequences:

>Translated_292_residues
MAMKDENTTDCILVDLHSHTTASDGQLTPSELIARAISKGVQIFAITDHDTTDGLKEAHEFNQAHETPLALINGVEISTR
WNNFDIHIVALNVDTDNVDLAAFLHNQRELRSSRAQEIGERLAKAGIEGAYDGAKAYAGEAAISRGHYARWLAEKGYATN
TANVFKKYLARGKTGYVPNNWGDMASAIEIIHRAGGVSVLAHPSGYKLSAKWLKRLVREYKEAGGDAMEVVLGQQTIDDR
NNLISLSIQNGLTCSLGSDFHFPGSWIEIGKNMFQPQGVNWVWQSEKWKVVQ
>Mature_291_residues
AMKDENTTDCILVDLHSHTTASDGQLTPSELIARAISKGVQIFAITDHDTTDGLKEAHEFNQAHETPLALINGVEISTRW
NNFDIHIVALNVDTDNVDLAAFLHNQRELRSSRAQEIGERLAKAGIEGAYDGAKAYAGEAAISRGHYARWLAEKGYATNT
ANVFKKYLARGKTGYVPNNWGDMASAIEIIHRAGGVSVLAHPSGYKLSAKWLKRLVREYKEAGGDAMEVVLGQQTIDDRN
NLISLSIQNGLTCSLGSDFHFPGSWIEIGKNMFQPQGVNWVWQSEKWKVVQ

Specific function: Unknown

COG id: COG0613

COG function: function code R; Predicted metal-dependent phosphoesterases (PHP family)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the trpH family [H]

Homologues:

Organism=Escherichia coli, GI1787520, Length=278, Percent_Identity=52.8776978417266, Blast_Score=285, Evalue=3e-78,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004013
- InterPro:   IPR003141
- InterPro:   IPR016195 [H]

Pfam domain/function: PF02811 PHP [H]

EC number: NA

Molecular weight: Translated: 32220; Mature: 32089

Theoretical pI: Translated: 6.44; Mature: 6.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAMKDENTTDCILVDLHSHTTASDGQLTPSELIARAISKGVQIFAITDHDTTDGLKEAHE
CCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHH
FNQAHETPLALINGVEISTRWNNFDIHIVALNVDTDNVDLAAFLHNQRELRSSRAQEIGE
HHHHHCCCCCEEECEEEEEECCCEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH
RLAKAGIEGAYDGAKAYAGEAAISRGHYARWLAEKGYATNTANVFKKYLARGKTGYVPNN
HHHHHCCCCCCCCHHHHHCHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCC
WGDMASAIEIIHRAGGVSVLAHPSGYKLSAKWLKRLVREYKEAGGDAMEVVLGQQTIDDR
HHHHHHHHHHHHHCCCEEEEECCCCCEEHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCC
NNLISLSIQNGLTCSLGSDFHFPGSWIEIGKNMFQPQGVNWVWQSEKWKVVQ
CCEEEEEECCCEEEECCCCCCCCCHHHHHHHHHCCCCCCCEEEECCCEEECC
>Mature Secondary Structure 
AMKDENTTDCILVDLHSHTTASDGQLTPSELIARAISKGVQIFAITDHDTTDGLKEAHE
CCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHH
FNQAHETPLALINGVEISTRWNNFDIHIVALNVDTDNVDLAAFLHNQRELRSSRAQEIGE
HHHHHCCCCCEEECEEEEEECCCEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH
RLAKAGIEGAYDGAKAYAGEAAISRGHYARWLAEKGYATNTANVFKKYLARGKTGYVPNN
HHHHHCCCCCCCCHHHHHCHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCC
WGDMASAIEIIHRAGGVSVLAHPSGYKLSAKWLKRLVREYKEAGGDAMEVVLGQQTIDDR
HHHHHHHHHHHHHCCCEEEEECCCCCEEHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCC
NNLISLSIQNGLTCSLGSDFHFPGSWIEIGKNMFQPQGVNWVWQSEKWKVVQ
CCEEEEEECCCEEEECCCCCCCCCHHHHHHHHHCCCCCCCEEEECCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]