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The map label for this gene is yeeZ [H]

Identifier: 167624493

GI number: 167624493

Start: 3113598

End: 3114440

Strand: Reverse

Name: yeeZ [H]

Synonym: Shal_2572

Alternate gene names: 167624493

Gene position: 3114440-3113598 (Counterclockwise)

Preceding gene: 167624494

Following gene: 167624492

Centisome position: 59.58

GC content: 45.79

Gene sequence:

>843_bases
ATGATTAAATCCGTTTGTATTGTTGGCTGTGGCTGGTTCGGGCTTCCACTCGCTAAGGCATTGGTCGCCCATGGGGTGAC
TGTTTTTGGCAGTAAACGAGAGTTATCTCAAGCACTGGCATTGAAAGAGCTGGGTATCGATGGCTTTAGGCTTGATTTAG
ATGACGATGTGCATCTGCAAGACGATAGCGCAGAGATCACGCAGATGTTGGCTACAGACTGTTTAATCATCAATATCCCT
CCCGGACTAAGAAAAGCTCCTGACGCTTATTTGCAGCGACTGACTAACTTAAAACAACTCATCGGCGATCATAGCTATAA
AAAGCTTATTTTTGTCAGTACAACGGGCGTCTATCCGTCTATAGAGGGGATGTTTACTGAGTGTGTTGAACAAGATGCTA
AGGCTCACTCTGAGATCAGTGAAAAACTATTACAAGCAGAAGCATTGTTTGTCGATAATGCCAACGCTTGTATTGTTCGT
TTTGCCGGGCTTGTCGGCCCTAAGCGGCACCCTGGACGTTTCCTTGCGGGTAAAACTGGACTTCCCGGCGCTAATAGCGC
AGTAAACCTGGTTCATCTTAATGACTGCATTGTTGCGGTGACGACGCTATTGTTTAATCCAGCAGCAAGCACCGTTTATA
ATGTGTGCGCACCGAATCACCCGACACGACAAGGTTTTTACCCAAAAGCGGCGAGTGACTTGGGCTTAGCGGCACCACAA
TTTGTCGATGATGGCGTAGAGAGTAAGCTTACTGGTAAGTCTATTAGCAGTGATAGATTGATTATAGAGTTCAGTTTCGA
GTATCAATTTAGCGATCCAATGGATATGCTGACAGCATGCTAA

Upstream 100 bases:

>100_bases
AGCTACAAATAAGCTAGAAATCGGTGTTTACTTCTTCCTACGTGCACTTCACCATGCTGCATGCGAATATCATTAAATTA
AAGAGCGAAAGAGTAACTGC

Downstream 100 bases:

>100_bases
TTTATTAGCATTGATAAACTAATAGAACCTAAGGATAAATATGAAGCCGTTTAAACAATCACTTGGTCGCATCTTTATTA
TTTTCACCATGTTATGTCTA

Product: NAD-dependent epimerase/dehydratase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 280; Mature: 280

Protein sequence:

>280_residues
MIKSVCIVGCGWFGLPLAKALVAHGVTVFGSKRELSQALALKELGIDGFRLDLDDDVHLQDDSAEITQMLATDCLIINIP
PGLRKAPDAYLQRLTNLKQLIGDHSYKKLIFVSTTGVYPSIEGMFTECVEQDAKAHSEISEKLLQAEALFVDNANACIVR
FAGLVGPKRHPGRFLAGKTGLPGANSAVNLVHLNDCIVAVTTLLFNPAASTVYNVCAPNHPTRQGFYPKAASDLGLAAPQ
FVDDGVESKLTGKSISSDRLIIEFSFEYQFSDPMDMLTAC

Sequences:

>Translated_280_residues
MIKSVCIVGCGWFGLPLAKALVAHGVTVFGSKRELSQALALKELGIDGFRLDLDDDVHLQDDSAEITQMLATDCLIINIP
PGLRKAPDAYLQRLTNLKQLIGDHSYKKLIFVSTTGVYPSIEGMFTECVEQDAKAHSEISEKLLQAEALFVDNANACIVR
FAGLVGPKRHPGRFLAGKTGLPGANSAVNLVHLNDCIVAVTTLLFNPAASTVYNVCAPNHPTRQGFYPKAASDLGLAAPQ
FVDDGVESKLTGKSISSDRLIIEFSFEYQFSDPMDMLTAC
>Mature_280_residues
MIKSVCIVGCGWFGLPLAKALVAHGVTVFGSKRELSQALALKELGIDGFRLDLDDDVHLQDDSAEITQMLATDCLIINIP
PGLRKAPDAYLQRLTNLKQLIGDHSYKKLIFVSTTGVYPSIEGMFTECVEQDAKAHSEISEKLLQAEALFVDNANACIVR
FAGLVGPKRHPGRFLAGKTGLPGANSAVNLVHLNDCIVAVTTLLFNPAASTVYNVCAPNHPTRQGFYPKAASDLGLAAPQ
FVDDGVESKLTGKSISSDRLIIEFSFEYQFSDPMDMLTAC

Specific function: Unknown

COG id: COG0451

COG function: function code MG; Nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788327, Length=277, Percent_Identity=39.7111913357401, Blast_Score=173, Evalue=1e-44,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001509
- InterPro:   IPR016040 [H]

Pfam domain/function: PF01370 Epimerase [H]

EC number: NA

Molecular weight: Translated: 30230; Mature: 30230

Theoretical pI: Translated: 5.59; Mature: 5.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKSVCIVGCGWFGLPLAKALVAHGVTVFGSKRELSQALALKELGIDGFRLDLDDDVHLQ
CCCCEEEEECCHHHHHHHHHHHHCCCCEECCHHHHHHHHHHHHHCCCCEEECCCCCCEEC
DDSAEITQMLATDCLIINIPPGLRKAPDAYLQRLTNLKQLIGDHSYKKLIFVSTTGVYPS
CCHHHHHHHHHHCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCC
IEGMFTECVEQDAKAHSEISEKLLQAEALFVDNANACIVRFAGLVGPKRHPGRFLAGKTG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHCCCCCCCCCEEECCCC
LPGANSAVNLVHLNDCIVAVTTLLFNPAASTVYNVCAPNHPTRQGFYPKAASDLGLAAPQ
CCCCCCEEEEEEHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCH
FVDDGVESKLTGKSISSDRLIIEFSFEYQFSDPMDMLTAC
HHHCCHHHCCCCCCCCCCEEEEEEEEEEECCCCHHHHHCC
>Mature Secondary Structure
MIKSVCIVGCGWFGLPLAKALVAHGVTVFGSKRELSQALALKELGIDGFRLDLDDDVHLQ
CCCCEEEEECCHHHHHHHHHHHHCCCCEECCHHHHHHHHHHHHHCCCCEEECCCCCCEEC
DDSAEITQMLATDCLIINIPPGLRKAPDAYLQRLTNLKQLIGDHSYKKLIFVSTTGVYPS
CCHHHHHHHHHHCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCC
IEGMFTECVEQDAKAHSEISEKLLQAEALFVDNANACIVRFAGLVGPKRHPGRFLAGKTG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHCCCCCCCCCEEECCCC
LPGANSAVNLVHLNDCIVAVTTLLFNPAASTVYNVCAPNHPTRQGFYPKAASDLGLAAPQ
CCCCCCEEEEEEHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCH
FVDDGVESKLTGKSISSDRLIIEFSFEYQFSDPMDMLTAC
HHHCCHHHCCCCCCCCCCEEEEEEEEEEECCCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]