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The map label for this gene is rpfG [H]

Identifier: 167624494

GI number: 167624494

Start: 3114544

End: 3115740

Strand: Reverse

Name: rpfG [H]

Synonym: Shal_2573

Alternate gene names: 167624494

Gene position: 3115740-3114544 (Counterclockwise)

Preceding gene: 167624495

Following gene: 167624493

Centisome position: 59.61

GC content: 45.78

Gene sequence:

>1197_bases
ATGTCAAAGGCGGCAGAGTTGCAAATCCCTTTGTCAGAGTTGAAAGTGGGTATGACAGTGAAGTTACCACTTTCATGGAC
GGATCATCCCTTTCTATTTAATCAAATAGAGATAGAGAAATCGGCTCATATAGAGTTAATTAAGACCTTAAATGTGTCTT
ACGTTACCTTGATCGGCGGCGGTGAACTGTTAACTGATGATGTTGCTCCCGAAGTTGAAGAAGTCTCGCCAACGCCGGAG
CAGGTCGCTGCGGACTCCAAGATATTAGTCAGAAAATCCATTCGAATGGGTCAGCAACGGTTTACCAAAGGCGCGAGTGA
TTGCCGGGCGACATTTTCAAAACTCGGTGCCGACCCCCAAGGTGCTTATCGTAGCGCTGCGACCCTAGTCGAAGAGCTGA
TGGATCACCTAAAAGAGACGGATACTCCCCATTTAGCATTGGTCAATCCCGGTGAAGATATCTCAGTCAATCAACATGGC
GTGTCGATTGCGGTATTATCCATGATGATAGGCCAAGCTCTTGCAATGAACCATTCGCAGCTACGTGATATCGCCATGGG
CTCGCTGTTTCATGATATTGGTAAGCTGAAGGTGCCTGATGTGATTAGGCGCAAGAAAAACAACCTGTCAGATCATGAAA
TTAACTTTTTAAATATGCACCCTAACTTTGGCTATGACATGCTCGATAAACTGGGCCTGTTCTCTAGTGAGGCCTTAGAT
ATTGTGCAGCATCACCATGAGTGGGTCGATGGCAGTGGTTTTCCTCATGGGCTAAAAGGCAAACAGATAGCGCTCACGAC
TCAAGTCGTCAGTTTAGTTAATGATTTCGATCGTTTACTTAGAGGGGGGGAAGGGCGCTCGCCGCAGGTGGCATTGGGTT
ACCTATTTAAGAATCGGGTCGGTAAACATGAGGCCGAGTTAATCTCAACCTTAGTTAAAGTACTAGGGATCTATCCTCCA
GGTACTATGGTGCAGCTTAGTGATGGTCAAGTGGCCAAAGTGATGATAACCACTTCAGAGGTTCAAAAGCCCATAGTGTG
GAGTTGTACACTTGACGGACAAAATGCAAGATTACGTTTTTTGGCCGAAGAGTCTGAAGATATTATCGGGGTACTTAAGG
CTGATGAGCTATCATCTTCGGCGCTTAAAACCCTCGATGGTAACTCGACTGTCAGTTTTTACTTTAGTAGTTTGTAG

Upstream 100 bases:

>100_bases
CAACAAAGTGAGTTTGTAACACAAGGGCGTAAGAAGCGCGTGTGCCCAACTGGGTTAGCGATAAACGGTAAGCTTAAAAG
TTAATGTTGGAGTGGCATAA

Downstream 100 bases:

>100_bases
TCAAGCTACAAATAAGCTAGAAATCGGTGTTTACTTCTTCCTACGTGCACTTCACCATGCTGCATGCGAATATCATTAAA
TTAAAGAGCGAAAGAGTAAC

Product: metal dependent phosphohydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 398; Mature: 397

Protein sequence:

>398_residues
MSKAAELQIPLSELKVGMTVKLPLSWTDHPFLFNQIEIEKSAHIELIKTLNVSYVTLIGGGELLTDDVAPEVEEVSPTPE
QVAADSKILVRKSIRMGQQRFTKGASDCRATFSKLGADPQGAYRSAATLVEELMDHLKETDTPHLALVNPGEDISVNQHG
VSIAVLSMMIGQALAMNHSQLRDIAMGSLFHDIGKLKVPDVIRRKKNNLSDHEINFLNMHPNFGYDMLDKLGLFSSEALD
IVQHHHEWVDGSGFPHGLKGKQIALTTQVVSLVNDFDRLLRGGEGRSPQVALGYLFKNRVGKHEAELISTLVKVLGIYPP
GTMVQLSDGQVAKVMITTSEVQKPIVWSCTLDGQNARLRFLAEESEDIIGVLKADELSSSALKTLDGNSTVSFYFSSL

Sequences:

>Translated_398_residues
MSKAAELQIPLSELKVGMTVKLPLSWTDHPFLFNQIEIEKSAHIELIKTLNVSYVTLIGGGELLTDDVAPEVEEVSPTPE
QVAADSKILVRKSIRMGQQRFTKGASDCRATFSKLGADPQGAYRSAATLVEELMDHLKETDTPHLALVNPGEDISVNQHG
VSIAVLSMMIGQALAMNHSQLRDIAMGSLFHDIGKLKVPDVIRRKKNNLSDHEINFLNMHPNFGYDMLDKLGLFSSEALD
IVQHHHEWVDGSGFPHGLKGKQIALTTQVVSLVNDFDRLLRGGEGRSPQVALGYLFKNRVGKHEAELISTLVKVLGIYPP
GTMVQLSDGQVAKVMITTSEVQKPIVWSCTLDGQNARLRFLAEESEDIIGVLKADELSSSALKTLDGNSTVSFYFSSL
>Mature_397_residues
SKAAELQIPLSELKVGMTVKLPLSWTDHPFLFNQIEIEKSAHIELIKTLNVSYVTLIGGGELLTDDVAPEVEEVSPTPEQ
VAADSKILVRKSIRMGQQRFTKGASDCRATFSKLGADPQGAYRSAATLVEELMDHLKETDTPHLALVNPGEDISVNQHGV
SIAVLSMMIGQALAMNHSQLRDIAMGSLFHDIGKLKVPDVIRRKKNNLSDHEINFLNMHPNFGYDMLDKLGLFSSEALDI
VQHHHEWVDGSGFPHGLKGKQIALTTQVVSLVNDFDRLLRGGEGRSPQVALGYLFKNRVGKHEAELISTLVKVLGIYPPG
TMVQLSDGQVAKVMITTSEVQKPIVWSCTLDGQNARLRFLAEESEDIIGVLKADELSSSALKTLDGNSTVSFYFSSL

Specific function: Positively regulates the synthesis of extracellular enzymes and extracellular polysaccharides. The cell-cell signaling system encoded by rpf genes is required for full virulence and is implicated in regulation of the formation and dispersal of biofilms [H

COG id: COG2206

COG function: function code T; HD-GYP domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR003607
- InterPro:   IPR001789 [H]

Pfam domain/function: PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 43649; Mature: 43517

Theoretical pI: Translated: 6.02; Mature: 6.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKAAELQIPLSELKVGMTVKLPLSWTDHPFLFNQIEIEKSAHIELIKTLNVSYVTLIGG
CCCCCEEECCHHHCCCCEEEEEECCCCCCCEEEEEEEECCCCCEEEEEECCCEEEEEEEC
GELLTDDVAPEVEEVSPTPEQVAADSKILVRKSIRMGQQRFTKGASDCRATFSKLGADPQ
CCEECCCCCCCHHHCCCCHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCC
GAYRSAATLVEELMDHLKETDTPHLALVNPGEDISVNQHGVSIAVLSMMIGQALAMNHSQ
HHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHH
LRDIAMGSLFHDIGKLKVPDVIRRKKNNLSDHEINFLNMHPNFGYDMLDKLGLFSSEALD
HHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHCCCCHHHHH
IVQHHHEWVDGSGFPHGLKGKQIALTTQVVSLVNDFDRLLRGGEGRSPQVALGYLFKNRV
HHHHHHHHCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHC
GKHEAELISTLVKVLGIYPPGTMVQLSDGQVAKVMITTSEVQKPIVWSCTLDGQNARLRF
CCHHHHHHHHHHHHHHCCCCCCEEEECCCCEEEEEEEHHHCCCCEEEEEEECCCCCEEEE
LAEESEDIIGVLKADELSSSALKTLDGNSTVSFYFSSL
EECCCCCEEEEEEHHHCCHHHHHHCCCCCEEEEEEECC
>Mature Secondary Structure 
SKAAELQIPLSELKVGMTVKLPLSWTDHPFLFNQIEIEKSAHIELIKTLNVSYVTLIGG
CCCCEEECCHHHCCCCEEEEEECCCCCCCEEEEEEEECCCCCEEEEEECCCEEEEEEEC
GELLTDDVAPEVEEVSPTPEQVAADSKILVRKSIRMGQQRFTKGASDCRATFSKLGADPQ
CCEECCCCCCCHHHCCCCHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCC
GAYRSAATLVEELMDHLKETDTPHLALVNPGEDISVNQHGVSIAVLSMMIGQALAMNHSQ
HHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHH
LRDIAMGSLFHDIGKLKVPDVIRRKKNNLSDHEINFLNMHPNFGYDMLDKLGLFSSEALD
HHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHCCCCHHHHH
IVQHHHEWVDGSGFPHGLKGKQIALTTQVVSLVNDFDRLLRGGEGRSPQVALGYLFKNRV
HHHHHHHHCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHC
GKHEAELISTLVKVLGIYPPGTMVQLSDGQVAKVMITTSEVQKPIVWSCTLDGQNARLRF
CCHHHHHHHHHHHHHHCCCCCCEEEECCCCEEEEEEEHHHCCCCEEEEEEECCCCCEEEE
LAEESEDIIGVLKADELSSSALKTLDGNSTVSFYFSSL
EECCCCCEEEEEEHHHCCHHHHHHCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11123673 [H]