| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is 167624488
Identifier: 167624488
GI number: 167624488
Start: 3108026
End: 3108919
Strand: Reverse
Name: 167624488
Synonym: Shal_2567
Alternate gene names: NA
Gene position: 3108919-3108026 (Counterclockwise)
Preceding gene: 167624489
Following gene: 167624487
Centisome position: 59.48
GC content: 43.18
Gene sequence:
>894_bases ATGGGACAAGACGCTATAAAAGAACATATCCAGCTATGGTTATCTCGGGAAGTTGCAAATGGCGCCGTTAGAGGCTTGCT CGATTCTTCAATCGCAATGGGCAGCGATGTCGGCAATATTAGGCCGGAAAATCAAGATAGGGTTGTTTGCGTACAGGTGC AAGTAACGGCTTCTGACTCTTTTATCATAGGAATTTTATGTGATGGTATGGGGGGAATGGCTTCAGGATCTAAATGTGCC GGTCTGAGTATTGCTTCATTTATAAGTAGCTGTGTCAACAATCTAGAACTGCCAGTGGCGGAGCGATTAATAAAGGCTGT GGAAGAGGCAAATGCCGATGTTTATTCCATATATAACAGCAACGGCGGGGCGACTTTATCGGCTTTTATTTATGATAGTC ATGGTCAATTTTGCGCTGTAAATGTTGGTGACAGCCGTGTATACGCTAATTTTGCCCACGGCATTAAGCAGTATTCTAAG GATGATACTTTTGCTGGGCAAAACGCGGATGCAGCTGGCGTTTATTTAAGTAAAGGCTTGTTGCAATATGTCGGAGTCGG GCCAGAACTAAAAGCACAAATTGTTAGCTTTCCAAAATATCGAAATATTAAGCGCTTAATTTTGACGTCTGATGGCGCAC ATTACATTGAAGCGAGTACGTTTAAGCAAATTCTGAATCAGAAGCTATCGGCCTGTGAGCTTTGTAGCAGGCTGATTCAA GTGTCAAAGTGGTGTGGTGGTTACGACAATACCTCAATTTTAATCGTGAATGATCTGCTTAACATTTTTACAGAGCCAGA TAAAACGTCTTTACCTGCAGGTACGGTTAAGCTTTGGGATCCGTTTGGTGAAATCCAATTTATCGGAGCGATAGCCCCTG CGGGCAATGGTTAA
Upstream 100 bases:
>100_bases CCTTTAGAGTGATTCGCTTTAGGGGATGTACCATAAAGCGGGTTGTTACGTTATATTGATTGCATTGAACTAATCACGGG CTTGCTAGAAAGAAAATGCT
Downstream 100 bases:
>100_bases CAATGGCTAGAAGTGGCTAATTGTCTGAAAATTTAGGTCTACCACAATAGTGATTCGAGATTTCTATCTCTCGCTATAGA TAAAAATTGGACTTTGAATG
Product: protein serine/threonine phosphatase
Products: NA
Alternate protein names: Protein Phosphatase; Serine/Threonine Protein Phosphatase; Protein Phosphatase Family Protein; C-Like Protein; C Domain-Containing Protein; Phosphoprotein Serine/Threonine Phosphatase
Number of amino acids: Translated: 297; Mature: 296
Protein sequence:
>297_residues MGQDAIKEHIQLWLSREVANGAVRGLLDSSIAMGSDVGNIRPENQDRVVCVQVQVTASDSFIIGILCDGMGGMASGSKCA GLSIASFISSCVNNLELPVAERLIKAVEEANADVYSIYNSNGGATLSAFIYDSHGQFCAVNVGDSRVYANFAHGIKQYSK DDTFAGQNADAAGVYLSKGLLQYVGVGPELKAQIVSFPKYRNIKRLILTSDGAHYIEASTFKQILNQKLSACELCSRLIQ VSKWCGGYDNTSILIVNDLLNIFTEPDKTSLPAGTVKLWDPFGEIQFIGAIAPAGNG
Sequences:
>Translated_297_residues MGQDAIKEHIQLWLSREVANGAVRGLLDSSIAMGSDVGNIRPENQDRVVCVQVQVTASDSFIIGILCDGMGGMASGSKCA GLSIASFISSCVNNLELPVAERLIKAVEEANADVYSIYNSNGGATLSAFIYDSHGQFCAVNVGDSRVYANFAHGIKQYSK DDTFAGQNADAAGVYLSKGLLQYVGVGPELKAQIVSFPKYRNIKRLILTSDGAHYIEASTFKQILNQKLSACELCSRLIQ VSKWCGGYDNTSILIVNDLLNIFTEPDKTSLPAGTVKLWDPFGEIQFIGAIAPAGNG >Mature_296_residues GQDAIKEHIQLWLSREVANGAVRGLLDSSIAMGSDVGNIRPENQDRVVCVQVQVTASDSFIIGILCDGMGGMASGSKCAG LSIASFISSCVNNLELPVAERLIKAVEEANADVYSIYNSNGGATLSAFIYDSHGQFCAVNVGDSRVYANFAHGIKQYSKD DTFAGQNADAAGVYLSKGLLQYVGVGPELKAQIVSFPKYRNIKRLILTSDGAHYIEASTFKQILNQKLSACELCSRLIQV SKWCGGYDNTSILIVNDLLNIFTEPDKTSLPAGTVKLWDPFGEIQFIGAIAPAGNG
Specific function: Unknown
COG id: COG0631
COG function: function code T; Serine/threonine protein phosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31758; Mature: 31627
Theoretical pI: Translated: 5.10; Mature: 5.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGQDAIKEHIQLWLSREVANGAVRGLLDSSIAMGSDVGNIRPENQDRVVCVQVQVTASDS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEECCCC FIIGILCDGMGGMASGSKCAGLSIASFISSCVNNLELPVAERLIKAVEEANADVYSIYNS EEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEEEEEC NGGATLSAFIYDSHGQFCAVNVGDSRVYANFAHGIKQYSKDDTFAGQNADAAGVYLSKGL CCCCEEEEEEEECCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHH LQYVGVGPELKAQIVSFPKYRNIKRLILTSDGAHYIEASTFKQILNQKLSACELCSRLIQ HHHHCCCHHHHHHHHCCCCCCCCEEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHH VSKWCGGYDNTSILIVNDLLNIFTEPDKTSLPAGTVKLWDPFGEIQFIGAIAPAGNG HHHHCCCCCCCEEEEHHHHHHHHCCCCCCCCCCCEEEEECCCCCEEEEEEECCCCCC >Mature Secondary Structure GQDAIKEHIQLWLSREVANGAVRGLLDSSIAMGSDVGNIRPENQDRVVCVQVQVTASDS CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEECCCC FIIGILCDGMGGMASGSKCAGLSIASFISSCVNNLELPVAERLIKAVEEANADVYSIYNS EEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEEEEEC NGGATLSAFIYDSHGQFCAVNVGDSRVYANFAHGIKQYSKDDTFAGQNADAAGVYLSKGL CCCCEEEEEEEECCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHH LQYVGVGPELKAQIVSFPKYRNIKRLILTSDGAHYIEASTFKQILNQKLSACELCSRLIQ HHHHCCCHHHHHHHHCCCCCCCCEEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHH VSKWCGGYDNTSILIVNDLLNIFTEPDKTSLPAGTVKLWDPFGEIQFIGAIAPAGNG HHHHCCCCCCCEEEEHHHHHHHHCCCCCCCCCCCEEEEECCCCCEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA