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The map label for this gene is yojE [H]

Identifier: 167624489

GI number: 167624489

Start: 3109067

End: 3110008

Strand: Reverse

Name: yojE [H]

Synonym: Shal_2568

Alternate gene names: 167624489

Gene position: 3110008-3109067 (Counterclockwise)

Preceding gene: 167624492

Following gene: 167624488

Centisome position: 59.5

GC content: 44.9

Gene sequence:

>942_bases
ATGTACTCCACAACAGTAAACCACGCTTCATCTTCATTTAAGGGCAACGCACTCGCCGCCTTCTCATTCCTATTATGGGG
CATGCTGCCGCTCTATTATCATTTTCTTCCTAATGCGAATATTAATGAATTATTGGCATTTAGGATCCTCTTCTCGGTCC
CTTTTATGCTGCTGGTATTTCTGCTAATGGGGCGGAGCATACCGTCAATGGCACAGCTTAAAGCCGACAAAAAGTCAGTA
GCACTCTGTGGACTGGCGTCGCTTATCATGTGTGTCTCTTGGTATAGCTTTACTTGGGCTATCACTCATGGACAAGTGCT
AGCGGCCAGCTTAGGTTTTTTCATTAATCCACTGTTTGCCATTGCTTTAGGTGTACTGTTTCTTGGGGATAAATTAACGG
CAGCACAAAAAATGGCTGTGGTATTGGGAGGCTGTGGCATCAGTTACATGGTCTATAGCTATGGAGAACTTCCATGGCTT
GCACTCAGTATGGGCAGCTTTTTTGCGCTCTATGGCCTATGTAAAAAGTTTATCCGCTTCGACTCTCTTACCTCAGTGAC
ATTAGAAGCGCTGCTACTGATGCCATTTGCCGCGATCTATTTATTCTGGTTGTGGAGCTCAGATCAAAGTGTAGCGATAT
CTTCAGCACTATCAGGAGAGACATCAGTATTACTACTCTATATCGGCTCTGCTCCAGTGACCTTAATGCCTTTAGTGTTC
TTTGCGCTGGCTATCAGGGCCACCAGCTTGTCTATGATAGGGCTGATGCAATATATCGAGCCTAGCTTGCATTTCCTCTT
GGCAGTTGTTTTATTTAATGAGCATTTTGATCAGGTTAAAGCGGTCAGTTTCGCCTTAATATGGACGGGACTACTGCTAT
GTTCGCTCGAAGCGCTTCCAAGACTAAGACACAAGTTTCGAGCGAGTCGACATCCAAGTTAA

Upstream 100 bases:

>100_bases
GCAATATGGATAAAGCAGAGTGATTCAAGTCACACTTTCTTCTGCTGTCTAATGAGAGAATACAGATCTTTAATAGCCTA
TCCATTCCAGTCAATTTCAT

Downstream 100 bases:

>100_bases
TCAAATGACTAATCAGCTGAGGTGAGCGAATTGACTCTAGGATGATTCCTTTAGAGTGATTCGCTTTAGGGGATGTACCA
TAAAGCGGGTTGTTACGTTA

Product: transporter DMT superfamily protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 313; Mature: 313

Protein sequence:

>313_residues
MYSTTVNHASSSFKGNALAAFSFLLWGMLPLYYHFLPNANINELLAFRILFSVPFMLLVFLLMGRSIPSMAQLKADKKSV
ALCGLASLIMCVSWYSFTWAITHGQVLAASLGFFINPLFAIALGVLFLGDKLTAAQKMAVVLGGCGISYMVYSYGELPWL
ALSMGSFFALYGLCKKFIRFDSLTSVTLEALLLMPFAAIYLFWLWSSDQSVAISSALSGETSVLLLYIGSAPVTLMPLVF
FALAIRATSLSMIGLMQYIEPSLHFLLAVVLFNEHFDQVKAVSFALIWTGLLLCSLEALPRLRHKFRASRHPS

Sequences:

>Translated_313_residues
MYSTTVNHASSSFKGNALAAFSFLLWGMLPLYYHFLPNANINELLAFRILFSVPFMLLVFLLMGRSIPSMAQLKADKKSV
ALCGLASLIMCVSWYSFTWAITHGQVLAASLGFFINPLFAIALGVLFLGDKLTAAQKMAVVLGGCGISYMVYSYGELPWL
ALSMGSFFALYGLCKKFIRFDSLTSVTLEALLLMPFAAIYLFWLWSSDQSVAISSALSGETSVLLLYIGSAPVTLMPLVF
FALAIRATSLSMIGLMQYIEPSLHFLLAVVLFNEHFDQVKAVSFALIWTGLLLCSLEALPRLRHKFRASRHPS
>Mature_313_residues
MYSTTVNHASSSFKGNALAAFSFLLWGMLPLYYHFLPNANINELLAFRILFSVPFMLLVFLLMGRSIPSMAQLKADKKSV
ALCGLASLIMCVSWYSFTWAITHGQVLAASLGFFINPLFAIALGVLFLGDKLTAAQKMAVVLGGCGISYMVYSYGELPWL
ALSMGSFFALYGLCKKFIRFDSLTSVTLEALLLMPFAAIYLFWLWSSDQSVAISSALSGETSVLLLYIGSAPVTLMPLVF
FALAIRATSLSMIGLMQYIEPSLHFLLAVVLFNEHFDQVKAVSFALIWTGLLLCSLEALPRLRHKFRASRHPS

Specific function: Unknown

COG id: COG2962

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

Organism=Escherichia coli, GI48994976, Length=297, Percent_Identity=34.006734006734, Blast_Score=164, Evalue=1e-41,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620
- InterPro:   IPR004626 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 34529; Mature: 34529

Theoretical pI: Translated: 9.11; Mature: 9.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYSTTVNHASSSFKGNALAAFSFLLWGMLPLYYHFLPNANINELLAFRILFSVPFMLLVF
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
LLMGRSIPSMAQLKADKKSVALCGLASLIMCVSWYSFTWAITHGQVLAASLGFFINPLFA
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECHHHHHHHHHHHHHHHHH
IALGVLFLGDKLTAAQKMAVVLGGCGISYMVYSYGELPWLALSMGSFFALYGLCKKFIRF
HHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
DSLTSVTLEALLLMPFAAIYLFWLWSSDQSVAISSALSGETSVLLLYIGSAPVTLMPLVF
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCEEEEEEECCCCHHHHHHHH
FALAIRATSLSMIGLMQYIEPSLHFLLAVVLFNEHFDQVKAVSFALIWTGLLLCSLEALP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLRHKFRASRHPS
HHHHHHHHCCCCC
>Mature Secondary Structure
MYSTTVNHASSSFKGNALAAFSFLLWGMLPLYYHFLPNANINELLAFRILFSVPFMLLVF
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
LLMGRSIPSMAQLKADKKSVALCGLASLIMCVSWYSFTWAITHGQVLAASLGFFINPLFA
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECHHHHHHHHHHHHHHHHH
IALGVLFLGDKLTAAQKMAVVLGGCGISYMVYSYGELPWLALSMGSFFALYGLCKKFIRF
HHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
DSLTSVTLEALLLMPFAAIYLFWLWSSDQSVAISSALSGETSVLLLYIGSAPVTLMPLVF
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCEEEEEEECCCCHHHHHHHH
FALAIRATSLSMIGLMQYIEPSLHFLLAVVLFNEHFDQVKAVSFALIWTGLLLCSLEALP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLRHKFRASRHPS
HHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9734814; 9384377 [H]