| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is ptxB [H]
Identifier: 167624452
GI number: 167624452
Start: 3059992
End: 3060846
Strand: Reverse
Name: ptxB [H]
Synonym: Shal_2530
Alternate gene names: 167624452
Gene position: 3060846-3059992 (Counterclockwise)
Preceding gene: 167624455
Following gene: 167624451
Centisome position: 58.56
GC content: 46.08
Gene sequence:
>855_bases ATGTCGCATGTAAGGCGGTTTACAGTGCTACTGCTACTGTTATTAACGCCGAGTGTGATGGCGACAACGTTTACGTTTAC CGCTATTCCCGATGAAGATGAGCGTCAATTAAGAACTCGCTTCGATAAAATTGCCGTTTACCTTGAAGAAAAACTAGGGG TTGAAGTTAAATATATCCCGGTAAAGTCTTACTCTGCAGCGGTAACAGCTTTTCGTAACAATCAAGTGCAACTGGCTTGG TTTGGCGGACTGTCGGGTGTGCAGGCGCGCCGTTTGGTTCCGGATTCTCACGCCATAGCACAAGGTTATGAAGATCAGTT TTTTAAGAGCTACTTTATTGCTCACGCTTCAACCGAGATCATCCCAAGCGATAGCTTTCCTAATTTAAATGGTTACACCT TTACCTTTGGCTCTAAGAACTCTACCTCTGGGCGCCTGATGCCTCAGTTCTTTATCGAGCGTAATCTAGGCAAAAATAGC AAAGATATCTTCAAGCGTATCGGCTACTCTGGCGATCATAGCCGCACCATCGCTCAGGTTCAGGCGGGTGTTTATCAAGT GGGGGCGGTCAATTACAAGGTGTGGGAAACTGCATTGGCTAACGGCAAAGTAGACCTTAATAAGGTCAGTGTCATTTGGG AAAGCCCAGCTTACCCTGATTATCAATGGACCATACGTGGCGATGTTGATAGCGAGTTTGGAGCGGGTTTTGCCGCAAAA GTCGAAGCGGCGCTTATTGGTATGACAGATCCCCATTTGTTAAAAAGTTTTCCTCGCCGGTCATTTGTTCCGGCTGACAA TTTAGATTATCAGCCGATAGAAGATGTGGCGAAGGCTATTGGGCTAATAGACTAA
Upstream 100 bases:
>100_bases AATAAGCGAACTTAGGCGTTATTTTATGTCGTTACTTCTGGGTTTGTTGCTGATTTTTCGTTAAGGTTACGTGAAAATTT ACCAGCTAAAGGATTAAAAT
Downstream 100 bases:
>100_bases CCCCATGTTAGTGCTTAACGATTTAGTCATTCAGTTTGGTGATAAAGTGGCTTTAGACATTGAGAGCTTAGCCATCACCC GTGGTGAAAAAATTGCCATT
Product: phosphonate ABC transporter periplasmic phosphonate-binding protein
Products: 3-phospho-serine [Cytoplasm]; phosphate [Cytoplasm]; alkylphosphonate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 284; Mature: 283
Protein sequence:
>284_residues MSHVRRFTVLLLLLLTPSVMATTFTFTAIPDEDERQLRTRFDKIAVYLEEKLGVEVKYIPVKSYSAAVTAFRNNQVQLAW FGGLSGVQARRLVPDSHAIAQGYEDQFFKSYFIAHASTEIIPSDSFPNLNGYTFTFGSKNSTSGRLMPQFFIERNLGKNS KDIFKRIGYSGDHSRTIAQVQAGVYQVGAVNYKVWETALANGKVDLNKVSVIWESPAYPDYQWTIRGDVDSEFGAGFAAK VEAALIGMTDPHLLKSFPRRSFVPADNLDYQPIEDVAKAIGLID
Sequences:
>Translated_284_residues MSHVRRFTVLLLLLLTPSVMATTFTFTAIPDEDERQLRTRFDKIAVYLEEKLGVEVKYIPVKSYSAAVTAFRNNQVQLAW FGGLSGVQARRLVPDSHAIAQGYEDQFFKSYFIAHASTEIIPSDSFPNLNGYTFTFGSKNSTSGRLMPQFFIERNLGKNS KDIFKRIGYSGDHSRTIAQVQAGVYQVGAVNYKVWETALANGKVDLNKVSVIWESPAYPDYQWTIRGDVDSEFGAGFAAK VEAALIGMTDPHLLKSFPRRSFVPADNLDYQPIEDVAKAIGLID >Mature_283_residues SHVRRFTVLLLLLLTPSVMATTFTFTAIPDEDERQLRTRFDKIAVYLEEKLGVEVKYIPVKSYSAAVTAFRNNQVQLAWF GGLSGVQARRLVPDSHAIAQGYEDQFFKSYFIAHASTEIIPSDSFPNLNGYTFTFGSKNSTSGRLMPQFFIERNLGKNSK DIFKRIGYSGDHSRTIAQVQAGVYQVGAVNYKVWETALANGKVDLNKVSVIWESPAYPDYQWTIRGDVDSEFGAGFAAKV EAALIGMTDPHLLKSFPRRSFVPADNLDYQPIEDVAKAIGLID
Specific function: Probably forms part of a binding-protein-dependent phosphite transporter. Required for oxidation of phosphite to phosphate [H]
COG id: COG3221
COG function: function code P; ABC-type phosphate/phosphonate transport system, periplasmic component
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1790543, Length=228, Percent_Identity=28.0701754385965, Blast_Score=62, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015168 - InterPro: IPR005770 [H]
Pfam domain/function: PF09084 NMT1 [H]
EC number: NA
Molecular weight: Translated: 31755; Mature: 31624
Theoretical pI: Translated: 7.83; Mature: 7.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHVRRFTVLLLLLLTPSVMATTFTFTAIPDEDERQLRTRFDKIAVYLEEKLGVEVKYIP CCHHHHHHHHHHHHHCCHHHHHEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEE VKSYSAAVTAFRNNQVQLAWFGGLSGVQARRLVPDSHAIAQGYEDQFFKSYFIAHASTEI ECCCCEEEEEEECCEEEEEEECCCCCCCHHHCCCCCHHHHCCHHHHHHHHHHHHHCCCEE IPSDSFPNLNGYTFTFGSKNSTSGRLMPQFFIERNLGKNSKDIFKRIGYSGDHSRTIAQV ECCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHCCCCCHHHHHHHCCCCCCCHHHHHHH QAGVYQVGAVNYKVWETALANGKVDLNKVSVIWESPAYPDYQWTIRGDVDSEFGAGFAAK HHCEEEECCCCHHHHHHHHCCCCEEEEEEEEEECCCCCCCEEEEEECCCCCCCCCCHHHE VEAALIGMTDPHLLKSFPRRSFVPADNLDYQPIEDVAKAIGLID EEEEEECCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCC >Mature Secondary Structure SHVRRFTVLLLLLLTPSVMATTFTFTAIPDEDERQLRTRFDKIAVYLEEKLGVEVKYIP CHHHHHHHHHHHHHCCHHHHHEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEE VKSYSAAVTAFRNNQVQLAWFGGLSGVQARRLVPDSHAIAQGYEDQFFKSYFIAHASTEI ECCCCEEEEEEECCEEEEEEECCCCCCCHHHCCCCCHHHHCCHHHHHHHHHHHHHCCCEE IPSDSFPNLNGYTFTFGSKNSTSGRLMPQFFIERNLGKNSKDIFKRIGYSGDHSRTIAQV ECCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHCCCCCHHHHHHHCCCCCCCHHHHHHH QAGVYQVGAVNYKVWETALANGKVDLNKVSVIWESPAYPDYQWTIRGDVDSEFGAGFAAK HHCEEEECCCCHHHHHHHHCCCCEEEEEEEEEECCCCCCCEEEEEECCCCCCCCCCHHHE VEAALIGMTDPHLLKSFPRRSFVPADNLDYQPIEDVAKAIGLID EEEEEECCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; 3-phospho-serine [Periplasm]; phosphite [Periplasm]; H2O; phosphate [Periplasm]; alkylphosphonate [Periplasm] [C]
Specific reaction: H2O + ATP + 3-phospho-serine [Periplasm] = ADP + phosphate + 3-phospho-serine [Cytoplasm] ATP + phosphite [Periplasm] + H2O = phosphite [Cytoplasm] + ADP + phosphate phosphate [Periplasm] + ATP + H2O = ADP + phosphate [Cytoplasm] + phosphate [Cytoplasm] A
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9791102 [H]