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The map label for this gene is yebA [H]

Identifier: 167624431

GI number: 167624431

Start: 3027043

End: 3027840

Strand: Reverse

Name: yebA [H]

Synonym: Shal_2509

Alternate gene names: 167624431

Gene position: 3027840-3027043 (Counterclockwise)

Preceding gene: 167624432

Following gene: 167624429

Centisome position: 57.93

GC content: 49.12

Gene sequence:

>798_bases
ATGACGTTTCAGGCCAGCGCCGCCGTTGAACTAAACGGGGAGTTATCCCAAGGCGCGCTCGTCCGAGCAAAGGTGCAACC
TGGCACTCAGGTATTTTTAAATGATTCACCGATAAAAGTGAATGCTCAAGGCCTGTTCACCTTTGGTTTCGCTAGAGAAG
CAGAGCTTGAGCAGATGCTTAAGCTGGTTTATCCCGACGGTTTAACCGAACTTAAACCGTTAAAACTGAAGAAGCGCAAA
TACCGGATCCAGGAAGTTAATGGGATCAGTAAGAAGATCATGAAGCCCGATCCTAAGGCACAAGCGCGGGCAGCAAAGGA
CTCTAAGCAGGTTAAGGCCGCAAGGGCGCAATTTACGCAAAGTGATGCTTTTAACCAGCAATTTATCTGGCCATTAACCG
GCAGGATCTCCGGCGTGTATGGCAGCCAGCGTATTTATAACGGTAAACCTGGCACACCACATTACGGTGTTGATGTGGCA
GCTAAAACGGGGACTGTGGTTGTGGCACCTGCCGATGGTGTGATCTCTCTCTCTGTGCCAGATATGTTTTACTCTGGTGG
CACCATGATTATTGATCATGGTTATGGCGTGAGCTCAAGCTTCTTACATTTGAGTAAGTTATATGTAAAAGAGGGGCAGC
AGGTTAAGCAGGGTGATAAAGTGGCTGAGGTAGGCTCGACAGGCCGCTCGACTGGCCCACATCTCGATTGGCGAGTTAAT
TGGTATCAGGTGCGACTCGATCCAACGACTATCGTGCCTTCGATGAAGAGCGTTTTAGCCAAGCAAGATGCTAGATAG

Upstream 100 bases:

>100_bases
TGCTAGTAGAACGGCTTATAATACTGCCGATTAGAAAAGCACTTAAGGAGTGGCTTTGAGAGCATTTACGCACATCATCT
TTACTGGTGTATTGACCAGT

Downstream 100 bases:

>100_bases
GCTCGTTCTTTTAAGCAATAAAAAAGCAGCCTAAATGGCTGCTTTTTTATTGGGAAATTTAAGTTGGCGTGCCTATTTAT
AGCGTTTTTTCCACTTAAAT

Product: peptidase M23B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 265; Mature: 264

Protein sequence:

>265_residues
MTFQASAAVELNGELSQGALVRAKVQPGTQVFLNDSPIKVNAQGLFTFGFAREAELEQMLKLVYPDGLTELKPLKLKKRK
YRIQEVNGISKKIMKPDPKAQARAAKDSKQVKAARAQFTQSDAFNQQFIWPLTGRISGVYGSQRIYNGKPGTPHYGVDVA
AKTGTVVVAPADGVISLSVPDMFYSGGTMIIDHGYGVSSSFLHLSKLYVKEGQQVKQGDKVAEVGSTGRSTGPHLDWRVN
WYQVRLDPTTIVPSMKSVLAKQDAR

Sequences:

>Translated_265_residues
MTFQASAAVELNGELSQGALVRAKVQPGTQVFLNDSPIKVNAQGLFTFGFAREAELEQMLKLVYPDGLTELKPLKLKKRK
YRIQEVNGISKKIMKPDPKAQARAAKDSKQVKAARAQFTQSDAFNQQFIWPLTGRISGVYGSQRIYNGKPGTPHYGVDVA
AKTGTVVVAPADGVISLSVPDMFYSGGTMIIDHGYGVSSSFLHLSKLYVKEGQQVKQGDKVAEVGSTGRSTGPHLDWRVN
WYQVRLDPTTIVPSMKSVLAKQDAR
>Mature_264_residues
TFQASAAVELNGELSQGALVRAKVQPGTQVFLNDSPIKVNAQGLFTFGFAREAELEQMLKLVYPDGLTELKPLKLKKRKY
RIQEVNGISKKIMKPDPKAQARAAKDSKQVKAARAQFTQSDAFNQQFIWPLTGRISGVYGSQRIYNGKPGTPHYGVDVAA
KTGTVVVAPADGVISLSVPDMFYSGGTMIIDHGYGVSSSFLHLSKLYVKEGQQVKQGDKVAEVGSTGRSTGPHLDWRVNW
YQVRLDPTTIVPSMKSVLAKQDAR

Specific function: Could be involved in cell wall degradation or formation [H]

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 LysM repeat [H]

Homologues:

Organism=Escherichia coli, GI87081989, Length=134, Percent_Identity=37.3134328358209, Blast_Score=83, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR013731
- InterPro:   IPR016047
- InterPro:   IPR002886
- InterPro:   IPR018392
- InterPro:   IPR002482 [H]

Pfam domain/function: PF01476 LysM; PF08525 OapA_N; PF01551 Peptidase_M23 [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 28987; Mature: 28855

Theoretical pI: Translated: 10.36; Mature: 10.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFQASAAVELNGELSQGALVRAKVQPGTQVFLNDSPIKVNAQGLFTFGFAREAELEQML
CCCCCCEEEEECCCCCCCEEEEEEECCCCEEEECCCCEEEECCEEEEECCCCHHHHHHHH
KLVYPDGLTELKPLKLKKRKYRIQEVNGISKKIMKPDPKAQARAAKDSKQVKAARAQFTQ
HHHCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
SDAFNQQFIWPLTGRISGVYGSQRIYNGKPGTPHYGVDVAAKTGTVVVAPADGVISLSVP
CCCCCCEEEEEECCCEEEECCCCEEECCCCCCCCCCEEEEECCCEEEEECCCCEEEEECC
DMFYSGGTMIIDHGYGVSSSFLHLSKLYVKEGQQVKQGDKVAEVGSTGRSTGPHLDWRVN
CCEECCCEEEEECCCCCCHHHHHHHHHHHHCCCHHHCCCHHHHHCCCCCCCCCCCEEEEE
WYQVRLDPTTIVPSMKSVLAKQDAR
EEEEEECCHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TFQASAAVELNGELSQGALVRAKVQPGTQVFLNDSPIKVNAQGLFTFGFAREAELEQML
CCCCCEEEEECCCCCCCEEEEEEECCCCEEEECCCCEEEECCEEEEECCCCHHHHHHHH
KLVYPDGLTELKPLKLKKRKYRIQEVNGISKKIMKPDPKAQARAAKDSKQVKAARAQFTQ
HHHCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
SDAFNQQFIWPLTGRISGVYGSQRIYNGKPGTPHYGVDVAAKTGTVVVAPADGVISLSVP
CCCCCCEEEEEECCCEEEECCCCEEECCCCCCCCCCEEEEECCCEEEEECCCCEEEEECC
DMFYSGGTMIIDHGYGVSSSFLHLSKLYVKEGQQVKQGDKVAEVGSTGRSTGPHLDWRVN
CCEECCCEEEEECCCCCCHHHHHHHHHHHHCCCHHHCCCHHHHHCCCCCCCCCCCEEEEE
WYQVRLDPTTIVPSMKSVLAKQDAR
EEEEEECCHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]