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The map label for this gene is ycaR [C]

Identifier: 167624426

GI number: 167624426

Start: 3021047

End: 3021220

Strand: Reverse

Name: ycaR [C]

Synonym: Shal_2504

Alternate gene names: 167624426

Gene position: 3021220-3021047 (Counterclockwise)

Preceding gene: 167624427

Following gene: 167624425

Centisome position: 57.8

GC content: 37.93

Gene sequence:

>174_bases
ATGGCATTTGATAAAAAATTACTCGAAATTGTTGCGTGTCCAGTGTGCAAAGGCAAGCTTGAATACAATAAAGAAGCGCA
ACAGTTGATCTGTAAAGCAGATAGACTCGTTTATCCGATTAATGATGGTATTCCAGTGCTATTAGAGAACAAAGCTGAGC
CCTTAATCGAGTAA

Upstream 100 bases:

>100_bases
GGTGGTATCTCGCAGTAGATGCGAAGCTATCCGCCTCGTTTGATCAACAACTACTCGCTAAAATCGATCGGTTAGTAGCA
GATAAGTAAAGGTATTCTAA

Downstream 100 bases:

>100_bases
GTTTAGCAATCCTTAAAAAGCGCCTCTATGGCGCTTTTTTACATTAGATAGCTAAAAACTAATATCTAAACTCTAAACTC
TAAACTCTAAACTCTAAACT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 57; Mature: 56

Protein sequence:

>57_residues
MAFDKKLLEIVACPVCKGKLEYNKEAQQLICKADRLVYPINDGIPVLLENKAEPLIE

Sequences:

>Translated_57_residues
MAFDKKLLEIVACPVCKGKLEYNKEAQQLICKADRLVYPINDGIPVLLENKAEPLIE
>Mature_56_residues
AFDKKLLEIVACPVCKGKLEYNKEAQQLICKADRLVYPINDGIPVLLENKAEPLIE

Specific function: Unknown

COG id: COG2835

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0434 family [H]

Homologues:

Organism=Escherichia coli, GI1787146, Length=53, Percent_Identity=64.1509433962264, Blast_Score=75, Evalue=7e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005651 [H]

Pfam domain/function: PF03966 Trm112p [H]

EC number: NA

Molecular weight: Translated: 6430; Mature: 6299

Theoretical pI: Translated: 4.96; Mature: 4.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
5.4 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFDKKLLEIVACPVCKGKLEYNKEAQQLICKADRLVYPINDGIPVLLENKAEPLIE
CCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCEEEECCCCCEEEECCCCCCCCC
>Mature Secondary Structure 
AFDKKLLEIVACPVCKGKLEYNKEAQQLICKADRLVYPINDGIPVLLENKAEPLIE
CCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCEEEECCCCCEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA