Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is 167624337

Identifier: 167624337

GI number: 167624337

Start: 2913231

End: 2914211

Strand: Reverse

Name: 167624337

Synonym: Shal_2414

Alternate gene names: NA

Gene position: 2914211-2913231 (Counterclockwise)

Preceding gene: 167624345

Following gene: 167624335

Centisome position: 55.75

GC content: 44.65

Gene sequence:

>981_bases
ATGCCTACGCCAAGAAAGGCGTTAGTCAGCTTGGAAGATACCCCTTATTATCATTGCATAAGTCGTTGTGTTAGAAAGGC
ATTCCTGTGTGGGGTTGATGTTCACACGGGACAATCCTATGAGCATAGGCGTGACTGGGTCGAAAGTCGGCTGTTGCAGC
TAGCTGAAGTGTTCGCAATCGATATCTGTGCTTTTGCGGTGATGAGTAATCATCTGCACCTTGTATTGCGGGTTGATGCT
GAGTTGGCTAAGAGCTGGTCAGATATCGAGGTTGTTTCTCAATGGCAAAAGCTGTTCAAAGGCGATAGCCTGAATCACGA
TTTTATTAAAGCTGAACCTCTTGAATCTTATCAACAAACAATCATCAATAAGCGGATAAAAGAGTACCGACTTCGATTAA
TGGATATCTCCTGGTTTATGCGGGCACTTAATGAACCCATTGCCAGAAAGGCTAATGCTGAAGATAAGTGTAAGGGGCGG
TTTTGGGAGGGACGTTTTAAGTCCCAAGCGTTACTTGATGAAGCGGCAGTGTTGGCTTGTATGGCCTATATCGACCTGAA
CCCTATCCGGGCCAATATTGCTACATCCCCAGACACCTCAGACTTCACCAGTATCCAAATGCGCATCAAAGCGGCAGTTA
AAGGCGAACAACCTAAATCGCTACTCCCTTTTGTAGGCGATGAGCATAAAGATATGCCTAAAGGTCTCATGTTTAATGCA
AAAGAATATCTACAACTAGTTGATGATACAGGTCGAATCCAACGTAATGATAAACGAGGTGCTATCAGCCAATCCTCACA
GCAGTTGTTATACCGCTTAAACATTCCTGCTGAGAACTGGCTTAAAATGACCGCTGAGTTCACGAAAATCTTCAAAGGCG
CAGTGGGCAATACTCAAGAATTATCGACGTATTGTGAACACCTAGAGCGTAAACGACGACAAGGTGCAGCCAATTGTCAC
CGATGGCTAGATTGTAGTTAG

Upstream 100 bases:

>100_bases
AGTAGCGAACCTCAGTAATGGAAATAACCAAGACACCCAAAATTGTTGGATAGCGATTCCTCTACTAGGCTTTAGTTAAG
GTTGAACAGAGGAGTGTGTT

Downstream 100 bases:

>100_bases
TTTACGTTAAACCTACTCACCCCTTTTTACGCTACCAGACTGATGTTTGGGCGTTTTTGCTGCGTGATTTTCATTTTAAT
TGCTGATATTTTGCTCGCAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 326; Mature: 325

Protein sequence:

>326_residues
MPTPRKALVSLEDTPYYHCISRCVRKAFLCGVDVHTGQSYEHRRDWVESRLLQLAEVFAIDICAFAVMSNHLHLVLRVDA
ELAKSWSDIEVVSQWQKLFKGDSLNHDFIKAEPLESYQQTIINKRIKEYRLRLMDISWFMRALNEPIARKANAEDKCKGR
FWEGRFKSQALLDEAAVLACMAYIDLNPIRANIATSPDTSDFTSIQMRIKAAVKGEQPKSLLPFVGDEHKDMPKGLMFNA
KEYLQLVDDTGRIQRNDKRGAISQSSQQLLYRLNIPAENWLKMTAEFTKIFKGAVGNTQELSTYCEHLERKRRQGAANCH
RWLDCS

Sequences:

>Translated_326_residues
MPTPRKALVSLEDTPYYHCISRCVRKAFLCGVDVHTGQSYEHRRDWVESRLLQLAEVFAIDICAFAVMSNHLHLVLRVDA
ELAKSWSDIEVVSQWQKLFKGDSLNHDFIKAEPLESYQQTIINKRIKEYRLRLMDISWFMRALNEPIARKANAEDKCKGR
FWEGRFKSQALLDEAAVLACMAYIDLNPIRANIATSPDTSDFTSIQMRIKAAVKGEQPKSLLPFVGDEHKDMPKGLMFNA
KEYLQLVDDTGRIQRNDKRGAISQSSQQLLYRLNIPAENWLKMTAEFTKIFKGAVGNTQELSTYCEHLERKRRQGAANCH
RWLDCS
>Mature_325_residues
PTPRKALVSLEDTPYYHCISRCVRKAFLCGVDVHTGQSYEHRRDWVESRLLQLAEVFAIDICAFAVMSNHLHLVLRVDAE
LAKSWSDIEVVSQWQKLFKGDSLNHDFIKAEPLESYQQTIINKRIKEYRLRLMDISWFMRALNEPIARKANAEDKCKGRF
WEGRFKSQALLDEAAVLACMAYIDLNPIRANIATSPDTSDFTSIQMRIKAAVKGEQPKSLLPFVGDEHKDMPKGLMFNAK
EYLQLVDDTGRIQRNDKRGAISQSSQQLLYRLNIPAENWLKMTAEFTKIFKGAVGNTQELSTYCEHLERKRRQGAANCHR
WLDCS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37561; Mature: 37429

Theoretical pI: Translated: 8.62; Mature: 8.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTPRKALVSLEDTPYYHCISRCVRKAFLCGVDVHTGQSYEHRRDWVESRLLQLAEVFAI
CCCCHHHHEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
DICAFAVMSNHLHLVLRVDAELAKSWSDIEVVSQWQKLFKGDSLNHDFIKAEPLESYQQT
HHHHHHHHHCCEEEEEEECHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHH
IINKRIKEYRLRLMDISWFMRALNEPIARKANAEDKCKGRFWEGRFKSQALLDEAAVLAC
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHH
MAYIDLNPIRANIATSPDTSDFTSIQMRIKAAVKGEQPKSLLPFVGDEHKDMPKGLMFNA
HHHHCCCHHEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHCCH
KEYLQLVDDTGRIQRNDKRGAISQSSQQLLYRLNIPAENWLKMTAEFTKIFKGAVGNTQE
HHHHHHHHCCCCCCCCCCCCCHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHCCCCCHHH
LSTYCEHLERKRRQGAANCHRWLDCS
HHHHHHHHHHHHHCCHHHHHHCCCCC
>Mature Secondary Structure 
PTPRKALVSLEDTPYYHCISRCVRKAFLCGVDVHTGQSYEHRRDWVESRLLQLAEVFAI
CCCHHHHEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
DICAFAVMSNHLHLVLRVDAELAKSWSDIEVVSQWQKLFKGDSLNHDFIKAEPLESYQQT
HHHHHHHHHCCEEEEEEECHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHH
IINKRIKEYRLRLMDISWFMRALNEPIARKANAEDKCKGRFWEGRFKSQALLDEAAVLAC
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHH
MAYIDLNPIRANIATSPDTSDFTSIQMRIKAAVKGEQPKSLLPFVGDEHKDMPKGLMFNA
HHHHCCCHHEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHCCH
KEYLQLVDDTGRIQRNDKRGAISQSSQQLLYRLNIPAENWLKMTAEFTKIFKGAVGNTQE
HHHHHHHHCCCCCCCCCCCCCHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHCCCCCHHH
LSTYCEHLERKRRQGAANCHRWLDCS
HHHHHHHHHHHHHCCHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA