| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is cheV [H]
Identifier: 167624321
GI number: 167624321
Start: 2898218
End: 2899162
Strand: Reverse
Name: cheV [H]
Synonym: Shal_2398
Alternate gene names: 167624321
Gene position: 2899162-2898218 (Counterclockwise)
Preceding gene: 167624322
Following gene: 167624318
Centisome position: 55.47
GC content: 43.49
Gene sequence:
>945_bases ATGGCTCAAATGTTGGCAAGTGTCGATCAACGCACAAAGCTGGTGGGTGAAAACCGACTCGAGTTATTGTTGTTTCGAAT AAGTGCGACTCAACTCTTTGCCATTAACGTGTTTAAAGTCAAGGAAGTAGTTAAAGTGCCAGCATTGAGTACGATGCCTG GCAGTCATAGCAGTATTATTGGAGTTGCCAACCTTAGAGGAATATCTATACCGGTTATTGATTTGCGCAAGGCGATAGGG TTTAGACCATCAGTTATTCAACCCGAGAGTAACCTTATCGTCACAGAGTACAATCGCTCCATACAAGGCTTCTTGGTCGA TAAAGTAGAGCATATCGTCAACCTGACTTGGGGCGATATTTTGCCGCCGCCGAAAACCGTCGGACGAGATAACTATTTAA CGGCAATTACCCGTATTGATTACCAAGAAAAGCAAGAGCTGGTTTCAATTATTGACGTTGAGAAGGTACTCGCCGAGATC ATACATTACGACATTAAGTTGTCTGATGGCGTCCTAGATGAACAGCTGTTACCTTTGATGCAAGGCCGTAAAGTGCTAAT TGTTGATGACTCGGCAACGGCAAGAAGACAAGTTCGTGAAACCCTCGAACAGCTGGGTTTAGAGGTCATTGAGGCAACTG ATGGCCTAGTGGCACTTAATCTGCTTAAAAAATGGTGTGACGAAGGCAAGGTGATAACCGATCACATTTTAATGCTGATC ACCGATGCAGAAATGCCTGAAATGGACGGCTATAAACTTACTCATGAGGTGCGCAGTGATAAACGCATGTCGGATCTATT TATTACGTTAAATACGTCGTTGAGTGGCAGCTTTAATAATGCGATGGTCGAGAAAGTGGGTTGCAATCGATTTATCTCAA AATTTCAACCAGATTTACTCGTCGAAGTGGTGCAAGATAAATTGCGAGAAACGTTAATGGGCTAG
Upstream 100 bases:
>100_bases TGAATCTCTATAAAAACCTAAATTGTGGGCTAGGTAAATGATTTATGTGTATAAATCATTATAATCTTCGAAAAATAAGA TGATATTTTAAGGGACTCAT
Downstream 100 bases:
>100_bases TTTCTGTTAACGTAAAGAGCACCGGAAACTTAATCCGAGTGCTCTTCTCTTAAGTCGCTCAATACTTGCCTTTTTAGCTC TGGTACTGCAGCAATATTGA
Product: response regulator receiver modulated CheW protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 314; Mature: 313
Protein sequence:
>314_residues MAQMLASVDQRTKLVGENRLELLLFRISATQLFAINVFKVKEVVKVPALSTMPGSHSSIIGVANLRGISIPVIDLRKAIG FRPSVIQPESNLIVTEYNRSIQGFLVDKVEHIVNLTWGDILPPPKTVGRDNYLTAITRIDYQEKQELVSIIDVEKVLAEI IHYDIKLSDGVLDEQLLPLMQGRKVLIVDDSATARRQVRETLEQLGLEVIEATDGLVALNLLKKWCDEGKVITDHILMLI TDAEMPEMDGYKLTHEVRSDKRMSDLFITLNTSLSGSFNNAMVEKVGCNRFISKFQPDLLVEVVQDKLRETLMG
Sequences:
>Translated_314_residues MAQMLASVDQRTKLVGENRLELLLFRISATQLFAINVFKVKEVVKVPALSTMPGSHSSIIGVANLRGISIPVIDLRKAIG FRPSVIQPESNLIVTEYNRSIQGFLVDKVEHIVNLTWGDILPPPKTVGRDNYLTAITRIDYQEKQELVSIIDVEKVLAEI IHYDIKLSDGVLDEQLLPLMQGRKVLIVDDSATARRQVRETLEQLGLEVIEATDGLVALNLLKKWCDEGKVITDHILMLI TDAEMPEMDGYKLTHEVRSDKRMSDLFITLNTSLSGSFNNAMVEKVGCNRFISKFQPDLLVEVVQDKLRETLMG >Mature_313_residues AQMLASVDQRTKLVGENRLELLLFRISATQLFAINVFKVKEVVKVPALSTMPGSHSSIIGVANLRGISIPVIDLRKAIGF RPSVIQPESNLIVTEYNRSIQGFLVDKVEHIVNLTWGDILPPPKTVGRDNYLTAITRIDYQEKQELVSIIDVEKVLAEII HYDIKLSDGVLDEQLLPLMQGRKVLIVDDSATARRQVRETLEQLGLEVIEATDGLVALNLLKKWCDEGKVITDHILMLIT DAEMPEMDGYKLTHEVRSDKRMSDLFITLNTSLSGSFNNAMVEKVGCNRFISKFQPDLLVEVVQDKLRETLMG
Specific function: Chemotaxis involves both a phosphorylation-dependent excitation and a methylation-dependent adaptation. CheV and CheW function together to couple CheA activation to methyl-accepting chemotaxis protein receptor status and possible CheA-dependent phosphoryl
COG id: COG0835
COG function: function code NT; Chemotaxis signal transduction protein
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002545 - InterPro: IPR011006 - InterPro: IPR001789 [H]
Pfam domain/function: PF01584 CheW; PF00072 Response_reg [H]
EC number: 2.7.3.- [C]
Molecular weight: Translated: 35251; Mature: 35119
Theoretical pI: Translated: 5.27; Mature: 5.27
Prosite motif: PS50851 CHEW ; PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQMLASVDQRTKLVGENRLELLLFRISATQLFAINVFKVKEVVKVPALSTMPGSHSSII CCHHHHHHHHHHHHHCCCCEEEEEEEECCCEEEEEEHHHHHHHHHCCCCCCCCCCCCCEE GVANLRGISIPVIDLRKAIGFRPSVIQPESNLIVTEYNRSIQGFLVDKVEHIVNLTWGDI EEECCCCCCCCHHHHHHHHCCCCCEECCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCC LPPPKTVGRDNYLTAITRIDYQEKQELVSIIDVEKVLAEIIHYDIKLSDGVLDEQLLPLM CCCCCCCCCCCCEEHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCEEECCCCHHHHHHHHH QGRKVLIVDDSATARRQVRETLEQLGLEVIEATDGLVALNLLKKWCDEGKVITDHILMLI CCCEEEEECCCHHHHHHHHHHHHHHCHHHHHHCCCHHHHHHHHHHHCCCCEEHHEEEEEE TDAEMPEMDGYKLTHEVRSDKRMSDLFITLNTSLSGSFNNAMVEKVGCNRFISKFQPDLL ECCCCCCCCCEEHHHHHHCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCHHHH VEVVQDKLRETLMG HHHHHHHHHHHHCC >Mature Secondary Structure AQMLASVDQRTKLVGENRLELLLFRISATQLFAINVFKVKEVVKVPALSTMPGSHSSII CHHHHHHHHHHHHHCCCCEEEEEEEECCCEEEEEEHHHHHHHHHCCCCCCCCCCCCCEE GVANLRGISIPVIDLRKAIGFRPSVIQPESNLIVTEYNRSIQGFLVDKVEHIVNLTWGDI EEECCCCCCCCHHHHHHHHCCCCCEECCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCC LPPPKTVGRDNYLTAITRIDYQEKQELVSIIDVEKVLAEIIHYDIKLSDGVLDEQLLPLM CCCCCCCCCCCCEEHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCEEECCCCHHHHHHHHH QGRKVLIVDDSATARRQVRETLEQLGLEVIEATDGLVALNLLKKWCDEGKVITDHILMLI CCCEEEEECCCHHHHHHHHHHHHHHCHHHHHHCCCHHHHHHHHHHHCCCCEEHHEEEEEE TDAEMPEMDGYKLTHEVRSDKRMSDLFITLNTSLSGSFNNAMVEKVGCNRFISKFQPDLL ECCCCCCCCCEEHHHHHHCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCHHHH VEVVQDKLRETLMG HHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Phosphotransferases with a nitrogenous group as acceptor [C]
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8169223; 9384377; 8169224 [H]