| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is mltB [H]
Identifier: 167624318
GI number: 167624318
Start: 2895527
End: 2896717
Strand: Reverse
Name: mltB [H]
Synonym: Shal_2395
Alternate gene names: 167624318
Gene position: 2896717-2895527 (Counterclockwise)
Preceding gene: 167624321
Following gene: 167624317
Centisome position: 55.42
GC content: 47.36
Gene sequence:
>1191_bases TTGTTTAAATCAATCCCCCTGGCTACAGCGCTTCTACTTACGAGTTCAGCAGCATACGCGACATCCGAGCAGCCAAATTG GGCAACTTGTGTTGCAGACCTACAACAGACTGCAAAAGCTCAAGGCTTATCACAACAGACTATTGACACAACCTTGGCAA ACGTTAAATTTGTGCCAAGAGTCATAGAGCTTGATAAAAAACAGCCAGAATTTAGTCAGTCGTTTGAGAACTATTTTACT AAGCGTGTTACCGATTGGCGTGTGGCTCAAGGTCGCAAGCTTTATCAAGAACATAAAGTGCTATTACACAAGCTGGCAAA AGAATATGGCATTCCGCCACAATATCTTTTAGCGTTTTGGGGGTTAGAAACTAACTTTGGCTCCTATAAAGGCAAGATGT CTGTACTCGATTCTCTAGCAACACTGGCTTGCGATCCAAGGCGCAGTAGCTACTTCACCACCGAACTGATGCAAGCGCTG AAGCTCAAAGAGCGTTATAACTTTGCTGAAACGGATATGGTTGGTTCTTGGGCAGGAGCCATGGGGCATACTCAATTTAT GCCTTCAGCATATGCAAAATATGCGGTTGATGGAGACGGAGATGGTAAAGCAGACTTGTGGAATAGCACCGAAGACGCAT TAACCTCTGCAGCTAACTTTCTACAAAACCTAGGTTGGAAACGCAACGAGCGCTGGGGAAGGGAAGTGACTCTGCCGGCA AACTTCTCCTACGCGCATCTTGGTAAGGCTGAGGCGCAGCCACTTGCGCGTTGGGCAGAACTCGGTATTACTCAAACCAA TGGCTCACCACTGAGCACGCCTGAGATGCAGGCGGCGCTTTATTTGCCATCAGGGCATACCGGTCCTGCATTCCTCGGCT ATGACAACTTTGATGTGATCATGCGCTGGAACCGTTCGACATTTTATGCGATAGCCGTTGGCCATCTTGCCGATAGAATT AATGGGGCAGTGGCTTTAAATGTGGCGCCTCCTAAAATGCCAAATCTAAGCCGAGCGCGGGTGAAAGAGTTACAAGTTCA ATTAAATAGCCAGGGTTATGATGTGGGCAAACCCGATGGGATATTGGGCGCTAAGTCGGTAAAAGGACTACAGGCTTACC AAAAGAGCCAAGGGCTAGTTGCCGATGGCTATCCTGATGAGGCGACGTTTAAGGCATTGAAAGTTAGATAA
Upstream 100 bases:
>100_bases ATTATGAATGAAATTCAGATTAGATGAAGCGAGTTTAAGGTCAGTTTAATCAAGCCACGTCATTTTATACGTTACAGTCA TTCATTTTGGGAGTCTTCTA
Downstream 100 bases:
>100_bases ACTTCAAATTTGAATAGGGTGCAATCAAAACGGTTGCATCGTTATTGTGATACTTTCAAACTCTTATTAAAAGCTTAGAT AAAGCATTTTTGTCTATAAG
Product: lytic murein transglycosylase
Products: Muramic Acid Residue [C]
Alternate protein names: 35 kDa soluble lytic transglycosylase; Murein hydrolase B; Slt35 [H]
Number of amino acids: Translated: 396; Mature: 396
Protein sequence:
>396_residues MFKSIPLATALLLTSSAAYATSEQPNWATCVADLQQTAKAQGLSQQTIDTTLANVKFVPRVIELDKKQPEFSQSFENYFT KRVTDWRVAQGRKLYQEHKVLLHKLAKEYGIPPQYLLAFWGLETNFGSYKGKMSVLDSLATLACDPRRSSYFTTELMQAL KLKERYNFAETDMVGSWAGAMGHTQFMPSAYAKYAVDGDGDGKADLWNSTEDALTSAANFLQNLGWKRNERWGREVTLPA NFSYAHLGKAEAQPLARWAELGITQTNGSPLSTPEMQAALYLPSGHTGPAFLGYDNFDVIMRWNRSTFYAIAVGHLADRI NGAVALNVAPPKMPNLSRARVKELQVQLNSQGYDVGKPDGILGAKSVKGLQAYQKSQGLVADGYPDEATFKALKVR
Sequences:
>Translated_396_residues MFKSIPLATALLLTSSAAYATSEQPNWATCVADLQQTAKAQGLSQQTIDTTLANVKFVPRVIELDKKQPEFSQSFENYFT KRVTDWRVAQGRKLYQEHKVLLHKLAKEYGIPPQYLLAFWGLETNFGSYKGKMSVLDSLATLACDPRRSSYFTTELMQAL KLKERYNFAETDMVGSWAGAMGHTQFMPSAYAKYAVDGDGDGKADLWNSTEDALTSAANFLQNLGWKRNERWGREVTLPA NFSYAHLGKAEAQPLARWAELGITQTNGSPLSTPEMQAALYLPSGHTGPAFLGYDNFDVIMRWNRSTFYAIAVGHLADRI NGAVALNVAPPKMPNLSRARVKELQVQLNSQGYDVGKPDGILGAKSVKGLQAYQKSQGLVADGYPDEATFKALKVR >Mature_396_residues MFKSIPLATALLLTSSAAYATSEQPNWATCVADLQQTAKAQGLSQQTIDTTLANVKFVPRVIELDKKQPEFSQSFENYFT KRVTDWRVAQGRKLYQEHKVLLHKLAKEYGIPPQYLLAFWGLETNFGSYKGKMSVLDSLATLACDPRRSSYFTTELMQAL KLKERYNFAETDMVGSWAGAMGHTQFMPSAYAKYAVDGDGDGKADLWNSTEDALTSAANFLQNLGWKRNERWGREVTLPA NFSYAHLGKAEAQPLARWAELGITQTNGSPLSTPEMQAALYLPSGHTGPAFLGYDNFDVIMRWNRSTFYAIAVGHLADRI NGAVALNVAPPKMPNLSRARVKELQVQLNSQGYDVGKPDGILGAKSVKGLQAYQKSQGLVADGYPDEATFKALKVR
Specific function: Murein-degrading enzyme. Catalyzes the cleavage of the glycosidic bonds between N-acetylmuramic acid and N- acetylglucosamine residues in peptidoglycan. May play a role in recycling of muropeptides during cell elongation and/or cell division [H]
COG id: COG2951
COG function: function code M; Membrane-bound lytic murein transglycosylase B
Gene ontology:
Cell location: Cell outer membrane; Lipid-anchor; Periplasmic side [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789053, Length=303, Percent_Identity=31.6831683168317, Blast_Score=134, Evalue=1e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011757 [H]
Pfam domain/function: NA
EC number: 3.2.1.- [C]
Molecular weight: Translated: 43816; Mature: 43816
Theoretical pI: Translated: 9.34; Mature: 9.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFKSIPLATALLLTSSAAYATSEQPNWATCVADLQQTAKAQGLSQQTIDTTLANVKFVPR CCCCCHHHHHHHHHCCHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH VIELDKKQPEFSQSFENYFTKRVTDWRVAQGRKLYQEHKVLLHKLAKEYGIPPQYLLAFW HHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH GLETNFGSYKGKMSVLDSLATLACDPRRSSYFTTELMQALKLKERYNFAETDMVGSWAGA CCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH MGHTQFMPSAYAKYAVDGDGDGKADLWNSTEDALTSAANFLQNLGWKRNERWGREVTLPA CCCHHHCCHHHHHEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEECC NFSYAHLGKAEAQPLARWAELGITQTNGSPLSTPEMQAALYLPSGHTGPAFLGYDNFDVI CCCHHHCCCHHHHHHHHHHHCCEEECCCCCCCCCCCEEEEECCCCCCCCEEECCCCCEEE MRWNRSTFYAIAVGHLADRINGAVALNVAPPKMPNLSRARVKELQVQLNSQGYDVGKPDG EEECCCEEEEEEHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCC ILGAKSVKGLQAYQKSQGLVADGYPDEATFKALKVR CCCHHHHHHHHHHHHCCCCEECCCCCHHHHHEEECC >Mature Secondary Structure MFKSIPLATALLLTSSAAYATSEQPNWATCVADLQQTAKAQGLSQQTIDTTLANVKFVPR CCCCCHHHHHHHHHCCHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH VIELDKKQPEFSQSFENYFTKRVTDWRVAQGRKLYQEHKVLLHKLAKEYGIPPQYLLAFW HHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH GLETNFGSYKGKMSVLDSLATLACDPRRSSYFTTELMQALKLKERYNFAETDMVGSWAGA CCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH MGHTQFMPSAYAKYAVDGDGDGKADLWNSTEDALTSAANFLQNLGWKRNERWGREVTLPA CCCHHHCCHHHHHEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEECC NFSYAHLGKAEAQPLARWAELGITQTNGSPLSTPEMQAALYLPSGHTGPAFLGYDNFDVI CCCHHHCCCHHHHHHHHHHHCCEEECCCCCCCCCCCEEEEECCCCCCCCEEECCCCCEEE MRWNRSTFYAIAVGHLADRINGAVALNVAPPKMPNLSRARVKELQVQLNSQGYDVGKPDG EEECCCEEEEEEHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCC ILGAKSVKGLQAYQKSQGLVADGYPDEATFKALKVR CCCHHHHHHHHHHHHCCCCEECCCCCHHHHHEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Muramic Acid Residue (N-Acetylmuramic Acid And N-Acetylglucosamine Residues) [C]
Specific reaction: Cleavage Of The Beta-1,4-Glycosidic Bond [C]
General reaction: Cleavage Bond [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7476170; 7789526; 9205837; 9278503; 3553176; 9761817; 10570954; 10545329; 10684641 [H]