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The map label for this gene is 167624282

Identifier: 167624282

GI number: 167624282

Start: 2853390

End: 2855693

Strand: Reverse

Name: 167624282

Synonym: Shal_2358

Alternate gene names: NA

Gene position: 2855693-2853390 (Counterclockwise)

Preceding gene: 167624283

Following gene: 167624281

Centisome position: 54.63

GC content: 44.84

Gene sequence:

>2304_bases
ATGTTAGATAAATTAGTTAATGGATTTGAATCTTATCTATTCCGTCATAGGGCATTTGTTATATTCTTTTTTGCGCTTGC
GACAATCTTCCTTGGCATGCAGGCGAGCAATCTTAAAATGGATGCCGCTTTTGTAAAGAATATTCCGCTTAACCACAGCT
ATATGCAAACCTATCTTAAGCATCAGAAACAATTCGGTGGGGCTAATAGCATTATGGTGGCTGTTGAAGACACCAGCGGT
AATATTTTTAATGCTAATTTTTTTGATTCTCTTAAGAATGTCCATGATCAACTGTTTTTTATTCCGGGTGTAGACCGAGC
ACAGGTTAAATCTCTATTTTCCCCCTCAACGCGTTTTACCGAAGTCGTTGAAGATGGTTTTGCTGGCGGCCCTGTCATAC
CCGCTGATTTTTCTACCACAGAGCAAGGCTTGAAAATTGTTCGCGGTAATATTGAAAAGGCTGGTATTGTCGGCCGGCTA
ATTGCAGAAGATTACTCGGCAGCAATGGTTAGCGCCCAGTTGATGGACTTCGATCCACAAACAGGTGAAGCCTTAGATAC
CTTGGCCTTTGCCGCTCAGTTAGAAAAACAGCTGCGGGAGCAGTATGAAACAGATACGATAAAGATCCACATCATAGGCT
TTGCCAAGATGGCGGGTGATGTTGCCGACGGTGCAAAAGGAGTTTTGCTGTTTTTCTTGATAGCGATCCTCGTTACTGCT
GTGATGGTTTACTTTTTCTCTAAATCGGTTGCGCTGACTATTCTGCCGCTAGTGTGTAGTTTGACTGCCGTGGTTTGGCA
GTTAGGTTTGCTCACTGTTGTCGGATTTGGGTTAGATCCCATGTCAATACTGATCCCGTTTTTGGTGTTTGCAATCGGAG
TCAGTCATAGCGTACAGATGATCAACGCGGTCAGGCGGCGTGTAACGGACGGCCAGACCACAAAGGCGGCAGCGGCATTA
GCCTTTAGAAGTTTACTTATTCCTGGCGGTGTGGCCTTGCTGTCTGACACCATTGGCTTTATGACGCTTTTAGCCATTGA
TATTGGGATTATTCGAGAGCTTGCGATATCGGCATCATTAGGTGTCGCCGTTATTATCTTAACTAACCTAATCTTATTGC
CACTGCTTATTTCATTTACTACGGTTACGCCGAGTAAAGAGAAGCAACCAAATTCAGCCAACAATATTTGGTTAAGCTTA
TCCAAATTTGCCACCCCAAAATACGCGGTTTGGGTTTTGTTAGCCACAGGGCTGCTATACGCAGTTGGTTTGCACCAAGC
TAATAAAATGAAGATTGGCGATCTACAAGGTGGCGCGCCAGCGCTACATCTTGACTCTCGCTATAATCAAGATACGTTTT
TCATAACCGATAAATTTTCTATCACGACCGATGTCATGACGGTGATTGTTGAGGCATTCCCTGAAGCTTGTACTTATCAC
TCTGTACTGACGCAAATTGATGATTTTGAGTGGCAGTTGAGCAACACGCCAGGCGTTGAAGCGACAGCCAGTCTTGCATC
CGTAGCTAAGAGGGTGAACGCTGGCTTTAATGAGGGAAACCCAAAGTGGAGTGTTTTGCCAAGAACAACCGCAAGTTTAG
TGCAAGCGGTAGGGCGGGTTCCAACAACATCAGGGCTTCTCAACAGTGATTGTTCGGTTATGCCTGTTTACCTGTTCCTA
AAAGATCATAAGGCCGAGACCATTGAAGTGGTTATCGATAAAGTTAATCAGCTGCAACAGCAGATGGATAACGATAAGAT
CCAATTTAAATTAGCCTCTGGTCCAGTTGGTGTAATGGCTGCAACCAATGAAGCGGTGGCCGAAGCACAGCTACCTATGA
TGCTTTATGTCTATGGTGCAGTGTTTTTCCTCTGTCTAATTAGCTTCCGCTCTTTAAGGGCGACCATTGCGGTTATTTTA
CCCCTGTATGTGGTATCGACACTGGCACAGGCATTAATGACCCAGCTCGATATTGGACTTGCGGTAAGCACCTTGCCAGT
TATTGCACTTGGTGTCGGTATCGGTGTCGACTACGGTATTTATATCCTATCGACCATGGCGGTTCGTTTAAGAGATGGCA
TGCCAGTACAACAAGCTTATTATGAAGCCTTGGTTGAGCGTGGCAGTGCAGTGATCTTTACCGGCCTGACTTTGGCAATT
GGTGTCAGTACTTGGTTCTTCTCGGCGCTTAAGTTCCAAATGGATATGGGAATATTGCTAACATTTATGTTTTTGGTAAA
TATGTTAGGGGCAATAATTATCTTGCCAGCGATTGCCGCCATGTTTTGGCGGCAGCCCAAGTAG

Upstream 100 bases:

>100_bases
TGAAAACCTAGTCGCTATTGCCGAGGACTCAAAAGGAAACTTATGGGTTGCTGGTAATAAAGGTCTCATCAAATTAGAAC
AAAAATAATAGGACCTTACT

Downstream 100 bases:

>100_bases
AGTCGACTAAAGGGGAGCATTAGCTCCTCTTTTTTTATGCATAAAAACACGTTATATACGATTGTTATGTCATTAGTGTG
AATTAAATCGGTTTGAGGTT

Product: hypothetical protein

Products: NA

Alternate protein names: RND Superfamily Exporter; Patched Family Protein; Efflux Transporter Hydrophobe/Amphiphile Efflux-3 Family; Exporter Of RND Superfamily; Exporter Of RND Superfamily Protein; Exporter Of RND Superfamily Protein-Like Protein; Inner Membrane Transporter; Transporter Protein; Polyketide Cyclase/Dehydrase; Exporters Of RND Superfamily; RND Family Multidrug Efflux Transporter; RND Superfamily Transporter; RND Family Transporter; RND Family Efflux Transporter; Transporter RND Superfamily

Number of amino acids: Translated: 767; Mature: 767

Protein sequence:

>767_residues
MLDKLVNGFESYLFRHRAFVIFFFALATIFLGMQASNLKMDAAFVKNIPLNHSYMQTYLKHQKQFGGANSIMVAVEDTSG
NIFNANFFDSLKNVHDQLFFIPGVDRAQVKSLFSPSTRFTEVVEDGFAGGPVIPADFSTTEQGLKIVRGNIEKAGIVGRL
IAEDYSAAMVSAQLMDFDPQTGEALDTLAFAAQLEKQLREQYETDTIKIHIIGFAKMAGDVADGAKGVLLFFLIAILVTA
VMVYFFSKSVALTILPLVCSLTAVVWQLGLLTVVGFGLDPMSILIPFLVFAIGVSHSVQMINAVRRRVTDGQTTKAAAAL
AFRSLLIPGGVALLSDTIGFMTLLAIDIGIIRELAISASLGVAVIILTNLILLPLLISFTTVTPSKEKQPNSANNIWLSL
SKFATPKYAVWVLLATGLLYAVGLHQANKMKIGDLQGGAPALHLDSRYNQDTFFITDKFSITTDVMTVIVEAFPEACTYH
SVLTQIDDFEWQLSNTPGVEATASLASVAKRVNAGFNEGNPKWSVLPRTTASLVQAVGRVPTTSGLLNSDCSVMPVYLFL
KDHKAETIEVVIDKVNQLQQQMDNDKIQFKLASGPVGVMAATNEAVAEAQLPMMLYVYGAVFFLCLISFRSLRATIAVIL
PLYVVSTLAQALMTQLDIGLAVSTLPVIALGVGIGVDYGIYILSTMAVRLRDGMPVQQAYYEALVERGSAVIFTGLTLAI
GVSTWFFSALKFQMDMGILLTFMFLVNMLGAIIILPAIAAMFWRQPK

Sequences:

>Translated_767_residues
MLDKLVNGFESYLFRHRAFVIFFFALATIFLGMQASNLKMDAAFVKNIPLNHSYMQTYLKHQKQFGGANSIMVAVEDTSG
NIFNANFFDSLKNVHDQLFFIPGVDRAQVKSLFSPSTRFTEVVEDGFAGGPVIPADFSTTEQGLKIVRGNIEKAGIVGRL
IAEDYSAAMVSAQLMDFDPQTGEALDTLAFAAQLEKQLREQYETDTIKIHIIGFAKMAGDVADGAKGVLLFFLIAILVTA
VMVYFFSKSVALTILPLVCSLTAVVWQLGLLTVVGFGLDPMSILIPFLVFAIGVSHSVQMINAVRRRVTDGQTTKAAAAL
AFRSLLIPGGVALLSDTIGFMTLLAIDIGIIRELAISASLGVAVIILTNLILLPLLISFTTVTPSKEKQPNSANNIWLSL
SKFATPKYAVWVLLATGLLYAVGLHQANKMKIGDLQGGAPALHLDSRYNQDTFFITDKFSITTDVMTVIVEAFPEACTYH
SVLTQIDDFEWQLSNTPGVEATASLASVAKRVNAGFNEGNPKWSVLPRTTASLVQAVGRVPTTSGLLNSDCSVMPVYLFL
KDHKAETIEVVIDKVNQLQQQMDNDKIQFKLASGPVGVMAATNEAVAEAQLPMMLYVYGAVFFLCLISFRSLRATIAVIL
PLYVVSTLAQALMTQLDIGLAVSTLPVIALGVGIGVDYGIYILSTMAVRLRDGMPVQQAYYEALVERGSAVIFTGLTLAI
GVSTWFFSALKFQMDMGILLTFMFLVNMLGAIIILPAIAAMFWRQPK
>Mature_767_residues
MLDKLVNGFESYLFRHRAFVIFFFALATIFLGMQASNLKMDAAFVKNIPLNHSYMQTYLKHQKQFGGANSIMVAVEDTSG
NIFNANFFDSLKNVHDQLFFIPGVDRAQVKSLFSPSTRFTEVVEDGFAGGPVIPADFSTTEQGLKIVRGNIEKAGIVGRL
IAEDYSAAMVSAQLMDFDPQTGEALDTLAFAAQLEKQLREQYETDTIKIHIIGFAKMAGDVADGAKGVLLFFLIAILVTA
VMVYFFSKSVALTILPLVCSLTAVVWQLGLLTVVGFGLDPMSILIPFLVFAIGVSHSVQMINAVRRRVTDGQTTKAAAAL
AFRSLLIPGGVALLSDTIGFMTLLAIDIGIIRELAISASLGVAVIILTNLILLPLLISFTTVTPSKEKQPNSANNIWLSL
SKFATPKYAVWVLLATGLLYAVGLHQANKMKIGDLQGGAPALHLDSRYNQDTFFITDKFSITTDVMTVIVEAFPEACTYH
SVLTQIDDFEWQLSNTPGVEATASLASVAKRVNAGFNEGNPKWSVLPRTTASLVQAVGRVPTTSGLLNSDCSVMPVYLFL
KDHKAETIEVVIDKVNQLQQQMDNDKIQFKLASGPVGVMAATNEAVAEAQLPMMLYVYGAVFFLCLISFRSLRATIAVIL
PLYVVSTLAQALMTQLDIGLAVSTLPVIALGVGIGVDYGIYILSTMAVRLRDGMPVQQAYYEALVERGSAVIFTGLTLAI
GVSTWFFSALKFQMDMGILLTFMFLVNMLGAIIILPAIAAMFWRQPK

Specific function: Unknown

COG id: COG1033

COG function: function code R; Predicted exporters of the RND superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 83366; Mature: 83366

Theoretical pI: Translated: 6.36; Mature: 6.36

Prosite motif: PS50156 SSD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDKLVNGFESYLFRHRAFVIFFFALATIFLGMQASNLKMDAAFVKNIPLNHSYMQTYLK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHCCCCCHHHHHHHHH
HQKQFGGANSIMVAVEDTSGNIFNANFFDSLKNVHDQLFFIPGVDRAQVKSLFSPSTRFT
HHHHCCCCCEEEEEEECCCCCEEECHHHHHHHHHHHCEEECCCCCHHHHHHHHCCCHHHH
EVVEDGFAGGPVIPADFSTTEQGLKIVRGNIEKAGIVGRLIAEDYSAAMVSAQLMDFDPQ
HHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
TGEALDTLAFAAQLEKQLREQYETDTIKIHIIGFAKMAGDVADGAKGVLLFFLIAILVTA
CCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEHHHHCCCCCCCHHHHHHHHHHHHHHH
VMVYFFSKSVALTILPLVCSLTAVVWQLGLLTVVGFGLDPMSILIPFLVFAIGVSHSVQM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
INAVRRRVTDGQTTKAAAALAFRSLLIPGGVALLSDTIGFMTLLAIDIGIIRELAISASL
HHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GVAVIILTNLILLPLLISFTTVTPSKEKQPNSANNIWLSLSKFATPKYAVWVLLATGLLY
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEHHHHCCCHHHHHHHHHHHHHH
AVGLHQANKMKIGDLQGGAPALHLDSRYNQDTFFITDKFSITTDVMTVIVEAFPEACTYH
HHHHCCCCCCEECCCCCCCCEEEECCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHH
SVLTQIDDFEWQLSNTPGVEATASLASVAKRVNAGFNEGNPKWSVLPRTTASLVQAVGRV
HHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEECCCHHHHHHHHHCCC
PTTSGLLNSDCSVMPVYLFLKDHKAETIEVVIDKVNQLQQQMDNDKIQFKLASGPVGVMA
CCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEE
ATNEAVAEAQLPMMLYVYGAVFFLCLISFRSLRATIAVILPLYVVSTLAQALMTQLDIGL
ECCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVSTLPVIALGVGIGVDYGIYILSTMAVRLRDGMPVQQAYYEALVERGSAVIFTGLTLAI
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEEEHHHHHH
GVSTWFFSALKFQMDMGILLTFMFLVNMLGAIIILPAIAAMFWRQPK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MLDKLVNGFESYLFRHRAFVIFFFALATIFLGMQASNLKMDAAFVKNIPLNHSYMQTYLK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHCCCCCHHHHHHHHH
HQKQFGGANSIMVAVEDTSGNIFNANFFDSLKNVHDQLFFIPGVDRAQVKSLFSPSTRFT
HHHHCCCCCEEEEEEECCCCCEEECHHHHHHHHHHHCEEECCCCCHHHHHHHHCCCHHHH
EVVEDGFAGGPVIPADFSTTEQGLKIVRGNIEKAGIVGRLIAEDYSAAMVSAQLMDFDPQ
HHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
TGEALDTLAFAAQLEKQLREQYETDTIKIHIIGFAKMAGDVADGAKGVLLFFLIAILVTA
CCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEHHHHCCCCCCCHHHHHHHHHHHHHHH
VMVYFFSKSVALTILPLVCSLTAVVWQLGLLTVVGFGLDPMSILIPFLVFAIGVSHSVQM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
INAVRRRVTDGQTTKAAAALAFRSLLIPGGVALLSDTIGFMTLLAIDIGIIRELAISASL
HHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GVAVIILTNLILLPLLISFTTVTPSKEKQPNSANNIWLSLSKFATPKYAVWVLLATGLLY
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEHHHHCCCHHHHHHHHHHHHHH
AVGLHQANKMKIGDLQGGAPALHLDSRYNQDTFFITDKFSITTDVMTVIVEAFPEACTYH
HHHHCCCCCCEECCCCCCCCEEEECCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHH
SVLTQIDDFEWQLSNTPGVEATASLASVAKRVNAGFNEGNPKWSVLPRTTASLVQAVGRV
HHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEECCCHHHHHHHHHCCC
PTTSGLLNSDCSVMPVYLFLKDHKAETIEVVIDKVNQLQQQMDNDKIQFKLASGPVGVMA
CCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEE
ATNEAVAEAQLPMMLYVYGAVFFLCLISFRSLRATIAVILPLYVVSTLAQALMTQLDIGL
ECCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVSTLPVIALGVGIGVDYGIYILSTMAVRLRDGMPVQQAYYEALVERGSAVIFTGLTLAI
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEEEHHHHHH
GVSTWFFSALKFQMDMGILLTFMFLVNMLGAIIILPAIAAMFWRQPK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA