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The map label for this gene is 167624283

Identifier: 167624283

GI number: 167624283

Start: 2855706

End: 2856722

Strand: Reverse

Name: 167624283

Synonym: Shal_2359

Alternate gene names: NA

Gene position: 2856722-2855706 (Counterclockwise)

Preceding gene: 167624284

Following gene: 167624282

Centisome position: 54.65

GC content: 41.4

Gene sequence:

>1017_bases
ATGTCGTTTAGCATGCTTCGATTTATCTCTATATTGAGTTTTATTTATCTTTTTTCCTCTTCTTTAGCAGTGGCTCAAGA
GAATAAATATCAACAACAAATTCAGCCTCTTGCTGCAAACTCTCTAGTATTAGATATTGCAAAGAATCAACAAACCTTGG
TTGCAGTAGGCGACCGTGGTCATGCCTTCGTTTATCAAGACCTGTGGAAACAGGTTAATACACCAACACAGGCTCTATTA
ACGAAAGTATTTTTTATCACGCCAGAAAAAGGCTGGGCAGTAGGGCATGACGCTACCATCTTACATACTACAGATGGTGG
TCAGTCTTGGACGCTGCAGATGCAGTCAGAAGAAATTGAAAAACCTCTGTTAGATATTCTGTTCTTTAATGAACACGATG
GCGTTGCGGTTGGCGCTTATGGCTTATTCTTTCGCACTCAAGATGGCGGTAAGACTTGGAAAAGTGAGTACCATCAAGAG
TTACTTTTTGAAGAGGATGTGGCCTATTTAGCGGAGTTAAAAGCAGAGGATGAAGCGCTTTACCTCTCTGAACGTAGCAT
GCTGCTGCCTCACTTTAATCGAATTATTCAAGCAACAGATAGCACACTCATTATGGTTGGTGAGCTGGGGTTAGTAGCAA
CTTCGACCGATCTGGGACAAAATTGGCTAAAACAAGATTTTATTTATGAGGGCTCCCTATTTAATGCCATCATTGCAGGT
GACACAGCTTTTATCATGGGCCTTCGTGGCAATGTGTTTAAATCGGATTTGAGCCTAGTTAATTGGCAAAGTGTCGGTTT
GCCTGTTGACTCCACTATCAACGCAGGGATCCTTCTTGAAGAAGGAGTATTACGGCTTGTGGGGAATGCTGGCGTAATTA
TTGATATATCCGTTATAGGTGAAAGTCACCTTATAGAGCAACGACAAGGTGAAAACCTAGTCGCTATTGCCGAGGACTCA
AAAGGAAACTTATGGGTTGCTGGTAATAAAGGTCTCATCAAATTAGAACAAAAATAA

Upstream 100 bases:

>100_bases
GTGAAGCAAACTTCACTCCGGCTGCATTACGCCGTGCAGGTATTCGTTAACCCAGCTTGTAGAGGGGCTCATGCCCCTCT
CTATTTTAAAGGAAGTTTGT

Downstream 100 bases:

>100_bases
TAGGACCTTACTATGTTAGATAAATTAGTTAATGGATTTGAATCTTATCTATTCCGTCATAGGGCATTTGTTATATTCTT
TTTTGCGCTTGCGACAATCT

Product: BNR repeat-containing protein

Products: NA

Alternate protein names: BNR Repeat-Containing Glycosyl Hydrolase; Glycosyl Hydrolase; BNR/Asp-Box Repeat-Containing Protein; BNR Domain-Containing Protein; Glycosyl Hydrolase BNR Repeat Protein; Glycosyl Hydrolase BNR Repeat; BNR/Asp-Box Repeat Protein; BNR/Asp-Box Repeat Domain Protein; Plant Photosystem II Stability/Assembly Factor Protein; Glycosyl Hydrolase BNR Repeat-Containing Glycosyl Hydrolase; BNR Repeat Protein; Protein Related Photosystem II Stability/Assembly Factor; Oxidoreductase

Number of amino acids: Translated: 338; Mature: 337

Protein sequence:

>338_residues
MSFSMLRFISILSFIYLFSSSLAVAQENKYQQQIQPLAANSLVLDIAKNQQTLVAVGDRGHAFVYQDLWKQVNTPTQALL
TKVFFITPEKGWAVGHDATILHTTDGGQSWTLQMQSEEIEKPLLDILFFNEHDGVAVGAYGLFFRTQDGGKTWKSEYHQE
LLFEEDVAYLAELKAEDEALYLSERSMLLPHFNRIIQATDSTLIMVGELGLVATSTDLGQNWLKQDFIYEGSLFNAIIAG
DTAFIMGLRGNVFKSDLSLVNWQSVGLPVDSTINAGILLEEGVLRLVGNAGVIIDISVIGESHLIEQRQGENLVAIAEDS
KGNLWVAGNKGLIKLEQK

Sequences:

>Translated_338_residues
MSFSMLRFISILSFIYLFSSSLAVAQENKYQQQIQPLAANSLVLDIAKNQQTLVAVGDRGHAFVYQDLWKQVNTPTQALL
TKVFFITPEKGWAVGHDATILHTTDGGQSWTLQMQSEEIEKPLLDILFFNEHDGVAVGAYGLFFRTQDGGKTWKSEYHQE
LLFEEDVAYLAELKAEDEALYLSERSMLLPHFNRIIQATDSTLIMVGELGLVATSTDLGQNWLKQDFIYEGSLFNAIIAG
DTAFIMGLRGNVFKSDLSLVNWQSVGLPVDSTINAGILLEEGVLRLVGNAGVIIDISVIGESHLIEQRQGENLVAIAEDS
KGNLWVAGNKGLIKLEQK
>Mature_337_residues
SFSMLRFISILSFIYLFSSSLAVAQENKYQQQIQPLAANSLVLDIAKNQQTLVAVGDRGHAFVYQDLWKQVNTPTQALLT
KVFFITPEKGWAVGHDATILHTTDGGQSWTLQMQSEEIEKPLLDILFFNEHDGVAVGAYGLFFRTQDGGKTWKSEYHQEL
LFEEDVAYLAELKAEDEALYLSERSMLLPHFNRIIQATDSTLIMVGELGLVATSTDLGQNWLKQDFIYEGSLFNAIIAGD
TAFIMGLRGNVFKSDLSLVNWQSVGLPVDSTINAGILLEEGVLRLVGNAGVIIDISVIGESHLIEQRQGENLVAIAEDSK
GNLWVAGNKGLIKLEQK

Specific function: Unknown

COG id: COG4447

COG function: function code R; Uncharacterized protein related to plant photosystem II stability/assembly factor

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37458; Mature: 37327

Theoretical pI: Translated: 4.46; Mature: 4.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFSMLRFISILSFIYLFSSSLAVAQENKYQQQIQPLAANSLVLDIAKNQQTLVAVGDRG
CCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCEEEEEECCCC
HAFVYQDLWKQVNTPTQALLTKVFFITPEKGWAVGHDATILHTTDGGQSWTLQMQSEEIE
CEEHHHHHHHHHCCCHHHHHEEEEEEECCCCEECCCCCEEEEECCCCCEEEEEECHHHHC
KPLLDILFFNEHDGVAVGAYGLFFRTQDGGKTWKSEYHQELLFEEDVAYLAELKAEDEAL
CCCEEEEEECCCCCEEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEE
YLSERSMLLPHFNRIIQATDSTLIMVGELGLVATSTDLGQNWLKQDFIYEGSLFNAIIAG
EEECCCHHHHHHHHHHHCCCCEEEEEECCCEEEECCHHHHHHHHHHHEECCCHHEEEEEC
DTAFIMGLRGNVFKSDLSLVNWQSVGLPVDSTINAGILLEEGVLRLVGNAGVIIDISVIG
CEEEEEECCCCEECCCCCEEEEEECCCCCCCCCCCCEEECCCHHEEECCCCEEEEEEECC
ESHLIEQRQGENLVAIAEDSKGNLWVAGNKGLIKLEQK
CHHHHHHHCCCCEEEEEECCCCCEEEECCCCEEEEECC
>Mature Secondary Structure 
SFSMLRFISILSFIYLFSSSLAVAQENKYQQQIQPLAANSLVLDIAKNQQTLVAVGDRG
CHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCEEEEEECCCC
HAFVYQDLWKQVNTPTQALLTKVFFITPEKGWAVGHDATILHTTDGGQSWTLQMQSEEIE
CEEHHHHHHHHHCCCHHHHHEEEEEEECCCCEECCCCCEEEEECCCCCEEEEEECHHHHC
KPLLDILFFNEHDGVAVGAYGLFFRTQDGGKTWKSEYHQELLFEEDVAYLAELKAEDEAL
CCCEEEEEECCCCCEEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEE
YLSERSMLLPHFNRIIQATDSTLIMVGELGLVATSTDLGQNWLKQDFIYEGSLFNAIIAG
EEECCCHHHHHHHHHHHCCCCEEEEEECCCEEEECCHHHHHHHHHHHEECCCHHEEEEEC
DTAFIMGLRGNVFKSDLSLVNWQSVGLPVDSTINAGILLEEGVLRLVGNAGVIIDISVIG
CEEEEEECCCCEECCCCCEEEEEECCCCCCCCCCCCEEECCCHHEEECCCCEEEEEEECC
ESHLIEQRQGENLVAIAEDSKGNLWVAGNKGLIKLEQK
CHHHHHHHCCCCEEEEEECCCCCEEEECCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA