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The map label for this gene is uvrY [H]

Identifier: 167624270

GI number: 167624270

Start: 2834680

End: 2835324

Strand: Reverse

Name: uvrY [H]

Synonym: Shal_2346

Alternate gene names: 167624270

Gene position: 2835324-2834680 (Counterclockwise)

Preceding gene: 167624273

Following gene: 167624269

Centisome position: 54.24

GC content: 45.58

Gene sequence:

>645_bases
TTGATCTCTGTATATTTAGTTGATGACCATGAGTTAGTAAGAACCGGTATTAGACGGATCCTCGAAGATGAACGTGGCAT
TAAAGTCGTGGGTGAGGCTGGTGATGGTGAAACGGCAGTGCAGTGGTGTCGTAAGAACGAAGCTGACGTGATTTTGATGG
ACATGAATATGCCCGGCATCGGCGGTTTAGAAGCAACACGTAAGATCTTACGCTTTCAGGCTCATGCTAAGATCATTGTG
TTAACCATCCATACCGAAGATCCTTTTCCCACGAAAGTGATGCAAGCCGGAGCGTCTGGTTATCTGACTAAGGGGGCGAC
CTCTCCTGAAGTGCTGCAGGCGATTAGACAGGTCGCTCACGGACAAAGATATTTATCGCCTGAAATTGCCCAGCAGATGG
CGTTGAGTCAATTTAATCAATCTGAAGAAAATCCATTTAAGTCGCTGTCGGAAAGAGAGCTGCAGATCATGCTGATGATC
ACCAATGGTGAAAAAGTAAGTGAAATCTCCGAGCAGCTAAATTTAAGCCCCAAGACGGTCAACAGTTATCGATATCGCTT
GTTTGCAAAGTTAGGCATAGGCGGAGACGTTGAGCTGACTCGCTTAGCAATTCGATACAAAATGCTGGATACTGGACAAT
TCTAA

Upstream 100 bases:

>100_bases
TCTATATCTAGTTAGATGCGATAAGTTAACCTTTATAACATTATTGATTTGAATCTGTTTGAAATGGATTTCAAATTAAG
CATCAAAAGGTAAGACGGCT

Downstream 100 bases:

>100_bases
ACAATTAGCCAAAATTTATGTCTGACGTGTTTAATGCCAATCAGTTTTTAAAGACAGTGACATCGTCACCCGGTGTTTAT
CGGATGTATGATGCAAAGGC

Product: response regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 214; Mature: 214

Protein sequence:

>214_residues
MISVYLVDDHELVRTGIRRILEDERGIKVVGEAGDGETAVQWCRKNEADVILMDMNMPGIGGLEATRKILRFQAHAKIIV
LTIHTEDPFPTKVMQAGASGYLTKGATSPEVLQAIRQVAHGQRYLSPEIAQQMALSQFNQSEENPFKSLSERELQIMLMI
TNGEKVSEISEQLNLSPKTVNSYRYRLFAKLGIGGDVELTRLAIRYKMLDTGQF

Sequences:

>Translated_214_residues
MISVYLVDDHELVRTGIRRILEDERGIKVVGEAGDGETAVQWCRKNEADVILMDMNMPGIGGLEATRKILRFQAHAKIIV
LTIHTEDPFPTKVMQAGASGYLTKGATSPEVLQAIRQVAHGQRYLSPEIAQQMALSQFNQSEENPFKSLSERELQIMLMI
TNGEKVSEISEQLNLSPKTVNSYRYRLFAKLGIGGDVELTRLAIRYKMLDTGQF
>Mature_214_residues
MISVYLVDDHELVRTGIRRILEDERGIKVVGEAGDGETAVQWCRKNEADVILMDMNMPGIGGLEATRKILRFQAHAKIIV
LTIHTEDPFPTKVMQAGASGYLTKGATSPEVLQAIRQVAHGQRYLSPEIAQQMALSQFNQSEENPFKSLSERELQIMLMI
TNGEKVSEISEQLNLSPKTVNSYRYRLFAKLGIGGDVELTRLAIRYKMLDTGQF

Specific function: Member of the two-component regulatory system UvrY/BarA involved in the regulation of carbon metabolism via the CsrA/CsrB regulatory system. UvrY activates the transcription of the untranslated csrB RNA and of barA, in an autoregulatory loop. Mediates the

COG id: COG2197

COG function: function code TK; Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1788222, Length=211, Percent_Identity=72.0379146919431, Blast_Score=312, Evalue=1e-86,
Organism=Escherichia coli, GI1788521, Length=204, Percent_Identity=35.7843137254902, Blast_Score=129, Evalue=1e-31,
Organism=Escherichia coli, GI1790102, Length=201, Percent_Identity=36.318407960199, Blast_Score=122, Evalue=1e-29,
Organism=Escherichia coli, GI1786747, Length=207, Percent_Identity=26.0869565217391, Blast_Score=103, Evalue=8e-24,
Organism=Escherichia coli, GI1788712, Length=206, Percent_Identity=26.6990291262136, Blast_Score=92, Evalue=3e-20,
Organism=Escherichia coli, GI1787473, Length=183, Percent_Identity=30.0546448087432, Blast_Score=86, Evalue=1e-18,
Organism=Escherichia coli, GI1788546, Length=201, Percent_Identity=28.3582089552239, Blast_Score=79, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001789
- InterPro:   IPR000792
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00196 GerE; PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 23982; Mature: 23982

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS00622 HTH_LUXR_1 ; PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISVYLVDDHELVRTGIRRILEDERGIKVVGEAGDGETAVQWCRKNEADVILMDMNMPGI
CEEEEEECCHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHCCCCCEEEEECCCCCC
GGLEATRKILRFQAHAKIIVLTIHTEDPFPTKVMQAGASGYLTKGATSPEVLQAIRQVAH
CCHHHHHHHHHHHCCCEEEEEEEECCCCCCHHHHHCCCCCCEECCCCCHHHHHHHHHHHC
GQRYLSPEIAQQMALSQFNQSEENPFKSLSERELQIMLMITNGEKVSEISEQLNLSPKTV
CCCCCCHHHHHHHHHHHHCCCCCCHHHHHCCCCEEEEEEEECCCHHHHHHHHHCCCCCHH
NSYRYRLFAKLGIGGDVELTRLAIRYKMLDTGQF
HHHHEEEEEEECCCCCCHHHHHEEHHEECCCCCC
>Mature Secondary Structure
MISVYLVDDHELVRTGIRRILEDERGIKVVGEAGDGETAVQWCRKNEADVILMDMNMPGI
CEEEEEECCHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHCCCCCEEEEECCCCCC
GGLEATRKILRFQAHAKIIVLTIHTEDPFPTKVMQAGASGYLTKGATSPEVLQAIRQVAH
CCHHHHHHHHHHHCCCEEEEEEEECCCCCCHHHHHCCCCCCEECCCCCHHHHHHHHHHHC
GQRYLSPEIAQQMALSQFNQSEENPFKSLSERELQIMLMITNGEKVSEISEQLNLSPKTV
CCCCCCHHHHHHHHHHHHCCCCCCHHHHHCCCCEEEEEEEECCCHHHHHHHHHCCCCCHH
NSYRYRLFAKLGIGGDVELTRLAIRYKMLDTGQF
HHHHEEEEEEECCCCCCHHHHHEEHHEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]