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The map label for this gene is grxD [H]

Identifier: 167624259

GI number: 167624259

Start: 2820872

End: 2821213

Strand: Reverse

Name: grxD [H]

Synonym: Shal_2335

Alternate gene names: 167624259

Gene position: 2821213-2820872 (Counterclockwise)

Preceding gene: 167624264

Following gene: 167624257

Centisome position: 53.97

GC content: 41.23

Gene sequence:

>342_bases
ATGGAAACTGTAGAAAAGATTAAACAGCAAATAGCCGAAAATCCAATTATCCTATATATGAAGGGCTCGCCAAAGTTACC
TAGCTGTGGTTTTTCTTCTCAAGTGGCTCAAATCATGATTAATTGCGATGAGCAATTTGCATTTGTCGATATCCTCCAGC
ATCCCGATATCCGTGCTGAGCTGCCAAAATACGCTAACTGGCCAACGTTCCCACAACTGTGGGTTGAAGGCGAGCTAATC
GGTGGTTGTGACATTCTTACTGAAATGTTCCAAAAAGGTGAGCTACAAACGCTTATCAAAGAAACCGGTGCTAAATATAA
AACAGAAGACGATCAAGCTTAA

Upstream 100 bases:

>100_bases
TTTCTATTAGATATTATCCCTATAAAAAGTAGGTTTTTGTTCTGCTACAGACTGGCGTACAATGGCGCGATTGTAATGAA
GTTCTAATCAGGAATAAAAA

Downstream 100 bases:

>100_bases
TATTGATTGTGTCAGTAAAAAGCCCCTAACGATGTGAGTCGTTAGGGGCTTTCTTATATCAATAGTACTAAATATGTGAT
TGGTATTATTACTTCAACAT

Product: glutaredoxin-like protein

Products: NA

Alternate protein names: Grx4; Monothiol glutaredoxin [H]

Number of amino acids: Translated: 113; Mature: 113

Protein sequence:

>113_residues
METVEKIKQQIAENPIILYMKGSPKLPSCGFSSQVAQIMINCDEQFAFVDILQHPDIRAELPKYANWPTFPQLWVEGELI
GGCDILTEMFQKGELQTLIKETGAKYKTEDDQA

Sequences:

>Translated_113_residues
METVEKIKQQIAENPIILYMKGSPKLPSCGFSSQVAQIMINCDEQFAFVDILQHPDIRAELPKYANWPTFPQLWVEGELI
GGCDILTEMFQKGELQTLIKETGAKYKTEDDQA
>Mature_113_residues
METVEKIKQQIAENPIILYMKGSPKLPSCGFSSQVAQIMINCDEQFAFVDILQHPDIRAELPKYANWPTFPQLWVEGELI
GGCDILTEMFQKGELQTLIKETGAKYKTEDDQA

Specific function: Monothiol glutaredoxin involved in the biogenesis of iron-sulfur clusters [H]

COG id: COG0278

COG function: function code O; Glutaredoxin-related protein

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 glutaredoxin domain [H]

Homologues:

Organism=Homo sapiens, GI42516576, Length=100, Percent_Identity=37, Blast_Score=92, Evalue=6e-20,
Organism=Homo sapiens, GI95113651, Length=93, Percent_Identity=43.010752688172, Blast_Score=90, Evalue=3e-19,
Organism=Escherichia coli, GI1787943, Length=111, Percent_Identity=75.6756756756757, Blast_Score=188, Evalue=8e-50,
Organism=Caenorhabditis elegans, GI17556042, Length=106, Percent_Identity=32.0754716981132, Blast_Score=82, Evalue=5e-17,
Organism=Caenorhabditis elegans, GI71988153, Length=84, Percent_Identity=35.7142857142857, Blast_Score=81, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI71988159, Length=75, Percent_Identity=41.3333333333333, Blast_Score=79, Evalue=5e-16,
Organism=Saccharomyces cerevisiae, GI6325198, Length=114, Percent_Identity=36.8421052631579, Blast_Score=93, Evalue=1e-20,
Organism=Saccharomyces cerevisiae, GI6321022, Length=74, Percent_Identity=48.6486486486487, Blast_Score=88, Evalue=3e-19,
Organism=Saccharomyces cerevisiae, GI6320303, Length=87, Percent_Identity=41.3793103448276, Blast_Score=87, Evalue=5e-19,
Organism=Drosophila melanogaster, GI24642023, Length=111, Percent_Identity=38.7387387387387, Blast_Score=95, Evalue=8e-21,
Organism=Drosophila melanogaster, GI19921242, Length=96, Percent_Identity=39.5833333333333, Blast_Score=87, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002109
- InterPro:   IPR014434
- InterPro:   IPR004480
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF00462 Glutaredoxin [H]

EC number: NA

Molecular weight: Translated: 12823; Mature: 12823

Theoretical pI: Translated: 4.31; Mature: 4.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METVEKIKQQIAENPIILYMKGSPKLPSCGFSSQVAQIMINCDEQFAFVDILQHPDIRAE
CCHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHCCCCCCC
LPKYANWPTFPQLWVEGELIGGCDILTEMFQKGELQTLIKETGAKYKTEDDQA
CCCCCCCCCCCCEEECCCEECCHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
METVEKIKQQIAENPIILYMKGSPKLPSCGFSSQVAQIMINCDEQFAFVDILQHPDIRAE
CCHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHCCCCCCC
LPKYANWPTFPQLWVEGELIGGCDILTEMFQKGELQTLIKETGAKYKTEDDQA
CCCCCCCCCCCCEEECCCEECCHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]