Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is 167624257

Identifier: 167624257

GI number: 167624257

Start: 2818204

End: 2819316

Strand: Reverse

Name: 167624257

Synonym: Shal_2333

Alternate gene names: NA

Gene position: 2819316-2818204 (Counterclockwise)

Preceding gene: 167624259

Following gene: 167624256

Centisome position: 53.94

GC content: 41.42

Gene sequence:

>1113_bases
ATGTTGAAACTCATTTTACGTACTTTTATTACAGTCTCTTTTCTGTCAGGTTTCTCAACGTTTGTTGCTGCAGCCGAGGT
TAAGCAACTCGATGAAGGTGTTGTGTCAATCGCCTCTAGAACGACTGCACTTAGAAGCCAAGGGATCAAGCAAGCCTTTG
AAGAAGTTATTTTAAAAAACTCTGGTACTCAGAGTGCACTCTTAAATGAAACGATCAAGAAACAGCTAGGTAATGCTAGC
TCACTAATGACTCAATACGGTTATTTTGAAGATGATGGAAAGTTATTCTTAAAAGTTAACTTTGACCATAAACATATTAT
TTCACTGTTACGAGAAGCTGGACTACCCGTTTGGGGAAAACAGCGACCCTTGACCTTAGTTTGGTTAGTTATCAATGATA
ATGGTCAACGCGAAATAATAAATGATGCGTCGAGAGATCCTAGCCGACAAGTTTTTAATCAAGAGTCAGCGACTCGTGGC
GCTCCATTGTTATTCCCGTTAATGGATCTTGATGATTCCATGAAGGTCGGTGTAAATGATATTCGTGGTAACTTCACCGA
CAATGTGGCAGATGCTTCTCTGCGCTATCAATCAAATTACTTCATCATGGCGACTATCGAGCCACAAGGAAGTGTTTATC
GTTACCAGATGAGTCTTTATCCACGAGAGAAATCAGCGCAATCTCTGCAATTAACGTCTGTTATTAATACGAGTGGAGAA
ACCGCCACGATCGATGAGGCCGTTGCGGCCATTGTCGCTGCCACCAGCGAGTACTATGTTGGTCAGTATGCGATAGCCGA
CTCAGGAGAGCAGAAAACCACTAAGCTTTCTTTTGCTGACGTAACGGATATGAAGCAGTTAGTTGCTATCGAACGTTATT
TAGATCAGCTAAGTGCAATCAAATCGGCAAGTATCGGTCGTATTGAAGGGCAGACGATTGAGTTTAATTTAAGCCTTTTT
GGTAATGAAGCCGATCTTCATCGATTAATGGCTCTTGACCCTCGAATTGAAACTGTGACTACGAATAGCCAACAAAACTT
GGACTATTCAGCAATCGGTACACAAGTTGAAGCTCATAAAGAGACACAGATCTATTATTGGAAAGGTCAATAG

Upstream 100 bases:

>100_bases
GCTTGCTTTAACTATTGCGGTGGCATATCTCTTTATCTCGGCAAAAGTTATTAGAGATGTGATACAATTTTATCTATTGA
GCCGTCTTTGAATCTTAAAC

Downstream 100 bases:

>100_bases
CTCCCAATCAATTGACACACATGCTACCATGTGTGTCTAATATAGATATATTGCGTCGTTGAGAAGCACCTGAGTGAAGT
CAAACTCTCCTTTACAGTTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 370; Mature: 370

Protein sequence:

>370_residues
MLKLILRTFITVSFLSGFSTFVAAAEVKQLDEGVVSIASRTTALRSQGIKQAFEEVILKNSGTQSALLNETIKKQLGNAS
SLMTQYGYFEDDGKLFLKVNFDHKHIISLLREAGLPVWGKQRPLTLVWLVINDNGQREIINDASRDPSRQVFNQESATRG
APLLFPLMDLDDSMKVGVNDIRGNFTDNVADASLRYQSNYFIMATIEPQGSVYRYQMSLYPREKSAQSLQLTSVINTSGE
TATIDEAVAAIVAATSEYYVGQYAIADSGEQKTTKLSFADVTDMKQLVAIERYLDQLSAIKSASIGRIEGQTIEFNLSLF
GNEADLHRLMALDPRIETVTTNSQQNLDYSAIGTQVEAHKETQIYYWKGQ

Sequences:

>Translated_370_residues
MLKLILRTFITVSFLSGFSTFVAAAEVKQLDEGVVSIASRTTALRSQGIKQAFEEVILKNSGTQSALLNETIKKQLGNAS
SLMTQYGYFEDDGKLFLKVNFDHKHIISLLREAGLPVWGKQRPLTLVWLVINDNGQREIINDASRDPSRQVFNQESATRG
APLLFPLMDLDDSMKVGVNDIRGNFTDNVADASLRYQSNYFIMATIEPQGSVYRYQMSLYPREKSAQSLQLTSVINTSGE
TATIDEAVAAIVAATSEYYVGQYAIADSGEQKTTKLSFADVTDMKQLVAIERYLDQLSAIKSASIGRIEGQTIEFNLSLF
GNEADLHRLMALDPRIETVTTNSQQNLDYSAIGTQVEAHKETQIYYWKGQ
>Mature_370_residues
MLKLILRTFITVSFLSGFSTFVAAAEVKQLDEGVVSIASRTTALRSQGIKQAFEEVILKNSGTQSALLNETIKKQLGNAS
SLMTQYGYFEDDGKLFLKVNFDHKHIISLLREAGLPVWGKQRPLTLVWLVINDNGQREIINDASRDPSRQVFNQESATRG
APLLFPLMDLDDSMKVGVNDIRGNFTDNVADASLRYQSNYFIMATIEPQGSVYRYQMSLYPREKSAQSLQLTSVINTSGE
TATIDEAVAAIVAATSEYYVGQYAIADSGEQKTTKLSFADVTDMKQLVAIERYLDQLSAIKSASIGRIEGQTIEFNLSLF
GNEADLHRLMALDPRIETVTTNSQQNLDYSAIGTQVEAHKETQIYYWKGQ

Specific function: Unknown

COG id: COG3249

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41161; Mature: 41161

Theoretical pI: Translated: 4.99; Mature: 4.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKLILRTFITVSFLSGFSTFVAAAEVKQLDEGVVSIASRTTALRSQGIKQAFEEVILKN
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
SGTQSALLNETIKKQLGNASSLMTQYGYFEDDGKLFLKVNFDHKHIISLLREAGLPVWGK
CCCHHHHHHHHHHHHHCCHHHHHHHCCEEECCCEEEEEEECCHHHHHHHHHHCCCCCCCC
QRPLTLVWLVINDNGQREIINDASRDPSRQVFNQESATRGAPLLFPLMDLDDSMKVGVND
CCCEEEEEEEECCCCCCHHHCCCCCCHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCHH
IRGNFTDNVADASLRYQSNYFIMATIEPQGSVYRYQMSLYPREKSAQSLQLTSVINTSGE
HCCCCCCCCCCCEEEEECCEEEEEEECCCCCEEEEEEEECCCCCCCCCEEEEEEECCCCC
TATIDEAVAAIVAATSEYYVGQYAIADSGEQKTTKLSFADVTDMKQLVAIERYLDQLSAI
CCHHHHHHHHHHHHCCHHEEEEEEECCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHH
KSASIGRIEGQTIEFNLSLFGNEADLHRLMALDPRIETVTTNSQQNLDYSAIGTQVEAHK
HCCCCCEECCCEEEEEEEEECCHHHHHHHHHCCCCEEEEECCCCCCCCHHHHCCEEECCC
ETQIYYWKGQ
CEEEEEEECC
>Mature Secondary Structure
MLKLILRTFITVSFLSGFSTFVAAAEVKQLDEGVVSIASRTTALRSQGIKQAFEEVILKN
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
SGTQSALLNETIKKQLGNASSLMTQYGYFEDDGKLFLKVNFDHKHIISLLREAGLPVWGK
CCCHHHHHHHHHHHHHCCHHHHHHHCCEEECCCEEEEEEECCHHHHHHHHHHCCCCCCCC
QRPLTLVWLVINDNGQREIINDASRDPSRQVFNQESATRGAPLLFPLMDLDDSMKVGVND
CCCEEEEEEEECCCCCCHHHCCCCCCHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCHH
IRGNFTDNVADASLRYQSNYFIMATIEPQGSVYRYQMSLYPREKSAQSLQLTSVINTSGE
HCCCCCCCCCCCEEEEECCEEEEEEECCCCCEEEEEEEECCCCCCCCCEEEEEEECCCCC
TATIDEAVAAIVAATSEYYVGQYAIADSGEQKTTKLSFADVTDMKQLVAIERYLDQLSAI
CCHHHHHHHHHHHHCCHHEEEEEEECCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHH
KSASIGRIEGQTIEFNLSLFGNEADLHRLMALDPRIETVTTNSQQNLDYSAIGTQVEAHK
HCCCCCEECCCEEEEEEEEECCHHHHHHHHHCCCCEEEEECCCCCCCCHHHHCCEEECCC
ETQIYYWKGQ
CEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA