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The map label for this gene is perM [H]

Identifier: 167624250

GI number: 167624250

Start: 2811356

End: 2812477

Strand: Reverse

Name: perM [H]

Synonym: Shal_2326

Alternate gene names: 167624250

Gene position: 2812477-2811356 (Counterclockwise)

Preceding gene: 167624251

Following gene: 167624248

Centisome position: 53.81

GC content: 44.12

Gene sequence:

>1122_bases
ATGTTATCAGTTTTAAGCCGTTGGTATAAAGAACGTTTTAGTGATCCACAAGCCGTAACGTTAGTGCTTATTTTGTTAGG
ATTTGCACTGGCAATCTATTTTGCAGGGGGCTTGTTAGCGCCATTATTAATTGCATTAGTGCTAGCATTCTTATTGGAGT
GGCCCGTCGCACAGATGGCCCGAATCGGGATCAATCGCCCTACAGCTGCCTCTTTAGTTCTGGTACTGTTTATCGGTTTA
ATGCTGTTAATTAGTTTTGGCCTGGTTCCGAGTCTTTGGCGCCAAGGGGTGAGTCTAATGGGGGACTTACCGAGTATGAT
AGACAAAGGCTTAAACACCGCTCAGCTATATATCAATCAATATCCCCAGTTTGTGAACCCAAGTCAGCTAGATACCATGG
TCGCCGAGCTTAAGAAGATGCTCGATACTCAACATCTACTCGACATTGGTAAGCAGATTTTGGGGTATTCGGCGTCGCTT
TTAGTACTGATGGTCTATGCGATTTTAATCCCTTTATTAGTGTTCTTCTTTTTAAAAGATAAAGATGAACTGATAAAAGG
CAGTAAACGCTTCTTTCCTACTAATCGAGATTTAGCGCGTAAAGTCTGGAGTGAGATGCACCAACAGATTTTTAATTACA
TTCGCGGAAAAGTCATCGAGATTGTTATCATCGGGGTGGTCAGTTATATCTTCTTTGCTGTAATGGATCTGCGTTATGCG
GCACTGCTCGGTGTTTTGACAGGGCTGTCGGTACTGATCCCCTATGTTGGTGCGACATTAGTGACACTCCCTATAGCCTT
AGTCGCATTTGTTCAGTGGGGAATAAGTCCTGAATTTGGCTATCTAATAGTGGGTTACGGCATAATTCAAGCCTTAGACG
GTAATGTATTAGTACCGATTTTATTCTCGGATGCTGTCGATCTACATCCGGTATTTATTATTGCAGCTGTGCTGATATTT
GGCGGTTTATGGGGCGTTTGGGGGGTATTCTTTGCGATTCCGCTGGCCTCCTTGGTCAAGGCGGTGATTAATGCTTGGCC
AGTACCAAACGCACAGGGCTTACAGCAACAAGACTCTGCAGCGCTCAATTTATCGCAAGCCGTAGAGCCAGAAACGAAAT
AG

Upstream 100 bases:

>100_bases
GAATAAGTAAAAGAGACTTTATACAATTTTACAGTGAGTGAAATATCATTTTAGTGATGGCTGCAAGGGATTAAAACGGT
CGTCGAACTAGGGAGTTTGA

Downstream 100 bases:

>100_bases
TTGTGGCGAGATAAAGTAAAAAGGAGCTCAATGCTCCTTTTTATTTGGGCTGAATTTTTGGTTACGAATTCAGCACATGC
TTTGCACTTGCCGCTAACGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 373; Mature: 373

Protein sequence:

>373_residues
MLSVLSRWYKERFSDPQAVTLVLILLGFALAIYFAGGLLAPLLIALVLAFLLEWPVAQMARIGINRPTAASLVLVLFIGL
MLLISFGLVPSLWRQGVSLMGDLPSMIDKGLNTAQLYINQYPQFVNPSQLDTMVAELKKMLDTQHLLDIGKQILGYSASL
LVLMVYAILIPLLVFFFLKDKDELIKGSKRFFPTNRDLARKVWSEMHQQIFNYIRGKVIEIVIIGVVSYIFFAVMDLRYA
ALLGVLTGLSVLIPYVGATLVTLPIALVAFVQWGISPEFGYLIVGYGIIQALDGNVLVPILFSDAVDLHPVFIIAAVLIF
GGLWGVWGVFFAIPLASLVKAVINAWPVPNAQGLQQQDSAALNLSQAVEPETK

Sequences:

>Translated_373_residues
MLSVLSRWYKERFSDPQAVTLVLILLGFALAIYFAGGLLAPLLIALVLAFLLEWPVAQMARIGINRPTAASLVLVLFIGL
MLLISFGLVPSLWRQGVSLMGDLPSMIDKGLNTAQLYINQYPQFVNPSQLDTMVAELKKMLDTQHLLDIGKQILGYSASL
LVLMVYAILIPLLVFFFLKDKDELIKGSKRFFPTNRDLARKVWSEMHQQIFNYIRGKVIEIVIIGVVSYIFFAVMDLRYA
ALLGVLTGLSVLIPYVGATLVTLPIALVAFVQWGISPEFGYLIVGYGIIQALDGNVLVPILFSDAVDLHPVFIIAAVLIF
GGLWGVWGVFFAIPLASLVKAVINAWPVPNAQGLQQQDSAALNLSQAVEPETK
>Mature_373_residues
MLSVLSRWYKERFSDPQAVTLVLILLGFALAIYFAGGLLAPLLIALVLAFLLEWPVAQMARIGINRPTAASLVLVLFIGL
MLLISFGLVPSLWRQGVSLMGDLPSMIDKGLNTAQLYINQYPQFVNPSQLDTMVAELKKMLDTQHLLDIGKQILGYSASL
LVLMVYAILIPLLVFFFLKDKDELIKGSKRFFPTNRDLARKVWSEMHQQIFNYIRGKVIEIVIIGVVSYIFFAVMDLRYA
ALLGVLTGLSVLIPYVGATLVTLPIALVAFVQWGISPEFGYLIVGYGIIQALDGNVLVPILFSDAVDLHPVFIIAAVLIF
GGLWGVWGVFFAIPLASLVKAVINAWPVPNAQGLQQQDSAALNLSQAVEPETK

Specific function: Unknown

COG id: COG0628

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0118 (perM) family [H]

Homologues:

Organism=Escherichia coli, GI1788838, Length=352, Percent_Identity=49.1477272727273, Blast_Score=340, Evalue=1e-94,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002549 [H]

Pfam domain/function: PF01594 UPF0118 [H]

EC number: NA

Molecular weight: Translated: 41062; Mature: 41062

Theoretical pI: Translated: 7.71; Mature: 7.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSVLSRWYKERFSDPQAVTLVLILLGFALAIYFAGGLLAPLLIALVLAFLLEWPVAQMA
CHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
RIGINRPTAASLVLVLFIGLMLLISFGLVPSLWRQGVSLMGDLPSMIDKGLNTAQLYINQ
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHH
YPQFVNPSQLDTMVAELKKMLDTQHLLDIGKQILGYSASLLVLMVYAILIPLLVFFFLKD
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCC
KDELIKGSKRFFPTNRDLARKVWSEMHQQIFNYIRGKVIEIVIIGVVSYIFFAVMDLRYA
HHHHHCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALLGVLTGLSVLIPYVGATLVTLPIALVAFVQWGISPEFGYLIVGYGIIQALDGNVLVPI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCEEEHH
LFSDAVDLHPVFIIAAVLIFGGLWGVWGVFFAIPLASLVKAVINAWPVPNAQGLQQQDSA
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHH
ALNLSQAVEPETK
HHHHHHHCCCCCC
>Mature Secondary Structure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HHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]