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The map label for this gene is yggA [C]

Identifier: 167624248

GI number: 167624248

Start: 2809660

End: 2810274

Strand: Reverse

Name: yggA [C]

Synonym: Shal_2324

Alternate gene names: 167624248

Gene position: 2810274-2809660 (Counterclockwise)

Preceding gene: 167624250

Following gene: 167624245

Centisome position: 53.77

GC content: 43.41

Gene sequence:

>615_bases
ATGCAAACAGCATTTATACAAGGAATGGGGATAGGCGGAAGCCTAATTATGGCGGTAGGCGCACAGAACGCCTTTGTTTT
AAAGCAAGGACTTAAGCGTTCACATTCGTTGCCTATAGCTGCAATTTGTTCATTTATCGACGCGATAATGATCACCGCTG
GTGTTGCGGGTCTTGGCCACCTCATTCTGGCTTTTCCGATAATTAAAGATATTGCCAGTTTCGGTGGGGCCATATTTTTG
CTTCTCTATGGCTATTGTGCACTAAAGTCATCGTTTAGTGACAGTAGAATGGAGAGCGATGAAGCGCTCGCCGCGGATAC
ATTAAAAAAAGCGGTATTAACGACTCTCGCAATTAGCTTGTTAAATCCACACCTTTATTTAGATACCGTTGTTTTACTGG
GGAGTATTAGCGTGCAATTTGAGGGAACTGAAAAGCAGTGGTTTGGTGCTGGCGCAGTATTGGCATCATTTGTGTGGTTT
TTTAGCTTAAGCCTAGGTGCTAAATATTTGAGCCCAGTGTTTCGAAAGCCTAAAGCTTGGTGTTATCTCGACAGGTTCAT
CTGCATTACTATGTGGTCCATTGCTGGGGCGTTAATGTATCCATACCTCTTTTAA

Upstream 100 bases:

>100_bases
TATAAGTTTAACTTATACATTATTAGGTTTATTAGTTGTACTTATTTGTCGGTGACGATTAAGCTTGCGACCAATAAATT
GAAGTCGTTTTGAGGTTGGC

Downstream 100 bases:

>100_bases
CTAAGTGTCTATAACAAAAAAAGGAGCCATAGGGCTCCTTTTTACAATGTGAACGAACAACTTATCAAGTTAGTTTGATA
ATGGTTAGCGACTCTTTAAA

Product: lysine exporter protein LysE/YggA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 204; Mature: 204

Protein sequence:

>204_residues
MQTAFIQGMGIGGSLIMAVGAQNAFVLKQGLKRSHSLPIAAICSFIDAIMITAGVAGLGHLILAFPIIKDIASFGGAIFL
LLYGYCALKSSFSDSRMESDEALAADTLKKAVLTTLAISLLNPHLYLDTVVLLGSISVQFEGTEKQWFGAGAVLASFVWF
FSLSLGAKYLSPVFRKPKAWCYLDRFICITMWSIAGALMYPYLF

Sequences:

>Translated_204_residues
MQTAFIQGMGIGGSLIMAVGAQNAFVLKQGLKRSHSLPIAAICSFIDAIMITAGVAGLGHLILAFPIIKDIASFGGAIFL
LLYGYCALKSSFSDSRMESDEALAADTLKKAVLTTLAISLLNPHLYLDTVVLLGSISVQFEGTEKQWFGAGAVLASFVWF
FSLSLGAKYLSPVFRKPKAWCYLDRFICITMWSIAGALMYPYLF
>Mature_204_residues
MQTAFIQGMGIGGSLIMAVGAQNAFVLKQGLKRSHSLPIAAICSFIDAIMITAGVAGLGHLILAFPIIKDIASFGGAIFL
LLYGYCALKSSFSDSRMESDEALAADTLKKAVLTTLAISLLNPHLYLDTVVLLGSISVQFEGTEKQWFGAGAVLASFVWF
FSLSLGAKYLSPVFRKPKAWCYLDRFICITMWSIAGALMYPYLF

Specific function: Unknown

COG id: COG1279

COG function: function code R; Lysine efflux permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LysE/ArgO transporter (TC 2.A.75) family [H]

Homologues:

Organism=Escherichia coli, GI1789290, Length=195, Percent_Identity=37.4358974358974, Blast_Score=135, Evalue=3e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004777
- InterPro:   IPR001123 [H]

Pfam domain/function: PF01810 LysE [H]

EC number: NA

Molecular weight: Translated: 22040; Mature: 22040

Theoretical pI: Translated: 8.61; Mature: 8.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTAFIQGMGIGGSLIMAVGAQNAFVLKQGLKRSHSLPIAAICSFIDAIMITAGVAGLGH
CCCCEEECCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
LILAFPIIKDIASFGGAIFLLLYGYCALKSSFSDSRMESDEALAADTLKKAVLTTLAISL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHH
LNPHLYLDTVVLLGSISVQFEGTEKQWFGAGAVLASFVWFFSLSLGAKYLSPVFRKPKAW
HCCHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
CYLDRFICITMWSIAGALMYPYLF
HHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MQTAFIQGMGIGGSLIMAVGAQNAFVLKQGLKRSHSLPIAAICSFIDAIMITAGVAGLGH
CCCCEEECCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
LILAFPIIKDIASFGGAIFLLLYGYCALKSSFSDSRMESDEALAADTLKKAVLTTLAISL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHH
LNPHLYLDTVVLLGSISVQFEGTEKQWFGAGAVLASFVWFFSLSLGAKYLSPVFRKPKAW
HCCHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
CYLDRFICITMWSIAGALMYPYLF
HHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]