Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is 167624229

Identifier: 167624229

GI number: 167624229

Start: 2791142

End: 2791528

Strand: Direct

Name: 167624229

Synonym: Shal_2305

Alternate gene names: NA

Gene position: 2791142-2791528 (Clockwise)

Preceding gene: 167624228

Following gene: 167624230

Centisome position: 53.4

GC content: 42.38

Gene sequence:

>387_bases
ATGGCTCGCATGACCTTAGCTATCCACCCAGAGCTCTACACTATCCATAGCTTTTCAGCTGACTGCGTGATCGCGGCAGA
TATCTTTCAACAAGAGATGTATTTCATCGGTAAAACCAAGGATGAGATCTCCGTTGTCGTCACCTCAGAGTTAACCCTCG
ACAGTATAGAGCAGGAAAATGATTGGCGTTGTCTTGAAGTCATCGGCCCATTAGGCTTTTCAATGACAGGCATATTAGCC
AGTGTTTCCAGCACCCTTGCTGAAGAAAAAATCAGTATTTTTGCCATTTCTACCTTCGATACCGACTATATCTTAGTCAA
AAAAGAGACCTTAAACGCGGCGACGAAGGCGCTTAAAAAGAAAAATTACCAAATTATTGATTATTAG

Upstream 100 bases:

>100_bases
TAACACTACGAACCCGAGGGGCGGTAATTGCCCCTCACGCCCTTTGCAAATTATGTTAAGCTAAATTCTATGAAAAGTTC
TCTTAAAGTGAATTGAATTT

Downstream 100 bases:

>100_bases
TTGTTTTTTTCTTAGATTAGTCTGTAGCAGAAAATACACTATGTATTTCATCGAGTGAGAGTTCTATATCCATGTATGAA
AAGATCATCATCATCACAGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 128; Mature: 127

Protein sequence:

>128_residues
MARMTLAIHPELYTIHSFSADCVIAADIFQQEMYFIGKTKDEISVVVTSELTLDSIEQENDWRCLEVIGPLGFSMTGILA
SVSSTLAEEKISIFAISTFDTDYILVKKETLNAATKALKKKNYQIIDY

Sequences:

>Translated_128_residues
MARMTLAIHPELYTIHSFSADCVIAADIFQQEMYFIGKTKDEISVVVTSELTLDSIEQENDWRCLEVIGPLGFSMTGILA
SVSSTLAEEKISIFAISTFDTDYILVKKETLNAATKALKKKNYQIIDY
>Mature_127_residues
ARMTLAIHPELYTIHSFSADCVIAADIFQQEMYFIGKTKDEISVVVTSELTLDSIEQENDWRCLEVIGPLGFSMTGILAS
VSSTLAEEKISIFAISTFDTDYILVKKETLNAATKALKKKNYQIIDY

Specific function: Unknown

COG id: COG3603

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14352; Mature: 14220

Theoretical pI: Translated: 4.44; Mature: 4.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARMTLAIHPELYTIHSFSADCVIAADIFQQEMYFIGKTKDEISVVVTSELTLDSIEQEN
CCEEEEEECCCEEEEECCCCCEEEEHHHHHHHHHEECCCCCCEEEEEECCCCCCCCCCCC
DWRCLEVIGPLGFSMTGILASVSSTLAEEKISIFAISTFDTDYILVKKETLNAATKALKK
CCEEEEEECCCCCHHHHHHHHHHHHHHHCCEEEEEEEECCCCEEEEEHHHHHHHHHHHHH
KNYQIIDY
CCCEEECC
>Mature Secondary Structure 
ARMTLAIHPELYTIHSFSADCVIAADIFQQEMYFIGKTKDEISVVVTSELTLDSIEQEN
CEEEEEECCCEEEEECCCCCEEEEHHHHHHHHHEECCCCCCEEEEEECCCCCCCCCCCC
DWRCLEVIGPLGFSMTGILASVSSTLAEEKISIFAISTFDTDYILVKKETLNAATKALKK
CCEEEEEECCCCCHHHHHHHHHHHHHHHCCEEEEEEEECCCCEEEEEHHHHHHHHHHHHH
KNYQIIDY
CCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA