Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is 167624209

Identifier: 167624209

GI number: 167624209

Start: 2768029

End: 2768226

Strand: Reverse

Name: 167624209

Synonym: Shal_2285

Alternate gene names: NA

Gene position: 2768226-2768029 (Counterclockwise)

Preceding gene: 167624210

Following gene: 167624208

Centisome position: 52.96

GC content: 42.93

Gene sequence:

>198_bases
ATGGATATCAAAAGTTTACTAAAAGAGTTTATCGAAGATGAAAGCGGTTTAACCGCAGTTGAGTATGCCATCGCTGGTGG
ATTGGTTGTTGGCGGCATGATCGCGGCGTTTAATACTTTAGGTGACAATGCTACAGCTAAAATTGATTGTTTAGCTTCAG
CGGTTAATGGTGCGAGCACAGACTGTACAGCTCCTTAG

Upstream 100 bases:

>100_bases
CTTTATATACAGCGTTACTTAGCAATGAACAAAATTTTGCGTTTGTAGCCGAACTTGTTTTAGCTTTTTTGAGACTGGAC
GAACATAGGTGGATAATATT

Downstream 100 bases:

>100_bases
ACTTTGGAAGAGCAATCAGATTGAAGATTGCTCACTTTAGGTGAGTAATCTTTTGATGAAAGTTAAGGGAATAATATGGC
TGATTATCAATTGTTACTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 65; Mature: 65

Protein sequence:

>65_residues
MDIKSLLKEFIEDESGLTAVEYAIAGGLVVGGMIAAFNTLGDNATAKIDCLASAVNGASTDCTAP

Sequences:

>Translated_65_residues
MDIKSLLKEFIEDESGLTAVEYAIAGGLVVGGMIAAFNTLGDNATAKIDCLASAVNGASTDCTAP
>Mature_65_residues
MDIKSLLKEFIEDESGLTAVEYAIAGGLVVGGMIAAFNTLGDNATAKIDCLASAVNGASTDCTAP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 6536; Mature: 6536

Theoretical pI: Translated: 3.77; Mature: 3.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIKSLLKEFIEDESGLTAVEYAIAGGLVVGGMIAAFNTLGDNATAKIDCLASAVNGAST
CCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCC
DCTAP
CCCCC
>Mature Secondary Structure
MDIKSLLKEFIEDESGLTAVEYAIAGGLVVGGMIAAFNTLGDNATAKIDCLASAVNGAST
CCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCC
DCTAP
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA