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The map label for this gene is 167624210

Identifier: 167624210

GI number: 167624210

Start: 2768773

End: 2769174

Strand: Reverse

Name: 167624210

Synonym: Shal_2286

Alternate gene names: NA

Gene position: 2769174-2768773 (Counterclockwise)

Preceding gene: 167624211

Following gene: 167624209

Centisome position: 52.98

GC content: 37.56

Gene sequence:

>402_bases
ATGGATAGTTTTTGTCATGATAATGCAACGTTAGCAAAGTTTATACGCAAAGAGAAGAACGCCAGAATGAAGCTTAAGTT
GTTGGCTGTGTTACATTTTCAAGATGGAAAATCAAGATACCAAATTGCAGATTTTCTAAAAGTCAGCCGTACGAGCGTTA
ACCGTTGGATTAGCCTCTACCTATCTAATGGGCTAGAGGGGTTAAAGGATAAACCCCACAGCGGTAGACCAAGTATTCTA
AACCAAAAGCAACTTTTGCAACTTAAGAGTTATGTCGACAATAAAAATAATCATGGAGGAGAGGGGAAGTTGACTGGAGG
GGATATTCAGTTATACATAGAGAAGCAATTTGGTGTTAAATATGAAATATCGAGTGTGTATAAATTGGTCGACAGATTTT
AG

Upstream 100 bases:

>100_bases
ACGAGTCAGCTTTCAATCGATGTGATTTATCAAACTGTATGGATTGATAAGGATGGGAGCTTACAGGTAAGAGGTACTAT
ATTGGACAAAGGAGCGAAAA

Downstream 100 bases:

>100_bases
GTCTCTATCTTTCCCTATCGATTATTCCAAAATGACTAAATGGATTCTAATAAATGAGTGCTTATTTAGTTTTGGAACTA
TTTTAATTCTTATAAAATTC

Product: transposase and inactivated derivative

Products: NA

Alternate protein names: ISSod10 Transposase OrfA; Transposase; Transposase ISC

Number of amino acids: Translated: 133; Mature: 133

Protein sequence:

>133_residues
MDSFCHDNATLAKFIRKEKNARMKLKLLAVLHFQDGKSRYQIADFLKVSRTSVNRWISLYLSNGLEGLKDKPHSGRPSIL
NQKQLLQLKSYVDNKNNHGGEGKLTGGDIQLYIEKQFGVKYEISSVYKLVDRF

Sequences:

>Translated_133_residues
MDSFCHDNATLAKFIRKEKNARMKLKLLAVLHFQDGKSRYQIADFLKVSRTSVNRWISLYLSNGLEGLKDKPHSGRPSIL
NQKQLLQLKSYVDNKNNHGGEGKLTGGDIQLYIEKQFGVKYEISSVYKLVDRF
>Mature_133_residues
MDSFCHDNATLAKFIRKEKNARMKLKLLAVLHFQDGKSRYQIADFLKVSRTSVNRWISLYLSNGLEGLKDKPHSGRPSIL
NQKQLLQLKSYVDNKNNHGGEGKLTGGDIQLYIEKQFGVKYEISSVYKLVDRF

Specific function: Unknown

COG id: COG3415

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15292; Mature: 15292

Theoretical pI: Translated: 10.35; Mature: 10.35

Prosite motif: PS00237 G_PROTEIN_RECEP_F1_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSFCHDNATLAKFIRKEKNARMKLKLLAVLHFQDGKSRYQIADFLKVSRTSVNRWISLY
CCCCCCCCHHHHHHHHHHCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHH
LSNGLEGLKDKPHSGRPSILNQKQLLQLKSYVDNKNNHGGEGKLTGGDIQLYIEKQFGVK
HHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEECCEEEEEEEECCCCE
YEISSVYKLVDRF
EHHHHHHHHHHCC
>Mature Secondary Structure
MDSFCHDNATLAKFIRKEKNARMKLKLLAVLHFQDGKSRYQIADFLKVSRTSVNRWISLY
CCCCCCCCHHHHHHHHHHCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHH
LSNGLEGLKDKPHSGRPSILNQKQLLQLKSYVDNKNNHGGEGKLTGGDIQLYIEKQFGVK
HHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEECCEEEEEEEECCCCE
YEISSVYKLVDRF
EHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA