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The map label for this gene is 167624197

Identifier: 167624197

GI number: 167624197

Start: 2756499

End: 2757461

Strand: Reverse

Name: 167624197

Synonym: Shal_2273

Alternate gene names: NA

Gene position: 2757461-2756499 (Counterclockwise)

Preceding gene: 167624198

Following gene: 167624196

Centisome position: 52.76

GC content: 42.99

Gene sequence:

>963_bases
ATGGATTTCCTAATTGGTTTATTTGGTCAGTTTTTTGATGATCCCCAACACGTTGAGTGGGCGATATATTCTGTTGCCGC
AATTGCTGGGGTCACTCTTGCGATATCAATATCTTACTTGATTAGTGGTGTGTACTCTCCGATTAGAAAGAGGTTGAAAT
CACTTAATGCAGCGGAAGGAACCAAAGTGACACATGATGTCACTGGCACTTTGGAACATGGTATGGGTGAGATGGCTAAG
AAGCCATTCCTCAACTTTTCTAATCATGAAACTAGGCGCCTGTTGATCCATGCGGGGTTTCATTCAGAAAATGCCTTGGC
TGTTTTTAATGCATCTCGTTTACTGCTTATTTTGTTAGGTTTTGTCATTTCATTAGTTATTTTGAACCTGTTTCCTGAGA
TCTCTGGTATTTGGACGATTTATATATTCTGCCTTTTTATTGGCGGTGCGTTTATTGTTCCGTCAATGGTGTTGCAGTCA
CTTGCAAATCGGCGAATGCGCCAACTTAGAGTCGGGTTTCCGGATGCGCTGGACTTATTAGTTGTCTGCTGCGAAGCAGG
ATTGGGGCTAATGGCAGCAATGCAAAGGGTTGCAAGGGAGTTAGCATTTAGCCACCCAAGTCTTGCGAGTGAGTTGGATT
TGGTTTGTAGTAAGGTGAGGGCGGGGTTAACCATTAAAGTTGCCTTACAGGAGTTTACCGATAGAACAGGACTTGAAGAT
ATTAAGGGACTGAACTCTGCTATATCACAGAGTATGCGTTTAGGTACCGGTATCGCAGAAACTTTACGTGTGTTTTCAGA
TGAATACCGTGATAAGCGACTACAAGCGGCTGAAGAGCAAGCTGCAAAACTTGCTGTTAAGATGATATTTCCAATGATGT
GCTGTATTTGGCCGTCATTTTTTATCGTTGCAGTAGGGCCTGCTGTACTAAAAGTGATGAAAGTATGGGGGCAGGCATTT
TAG

Upstream 100 bases:

>100_bases
ACGGGGACTGAAGAGGGCAATCAACTGCTTATTTGGGGAGCTATCGGTATGTTTGTCGGTGGCATGTGGATTAGTAAGTT
AATAAGGATAGATATGTAAT

Downstream 100 bases:

>100_bases
CGCTACATTATAAGAATAGGGGATGCTTATGAGACTGGAATGGATGCAGCTAAGTAAACGGGGAGTGGGATCTGTCATGA
TATTGATTAGGGCCTGCATT

Product: type II secretion system protein

Products: NA

Alternate protein names: Flp Pilus Assembly Protein TadC; Type II Secretion System F Domain Protein; Type II/IV Secretion System Protein TadC Subfamily; Type II Secretion System F Domain-Containing Protein; Flp Pilus Assembly Protein; TadC Protein; Tad Secretion System Secretion Accessory Protein; Type II Secretion System Protein F; Type II Secretion System F Domain; Bacterial Type II Secretion System Protein F Domain; Pilus Assembly Protein; Tight Adherence TadC-Like Transmembrane Protein; Pilus Component Protein; Integral Membrane Protein; TadC Pilus Assembly Protein; TadC Family Type II/IV Secretion System Protein; Pilus Assembly Protein TadC; Type II Secretion System; TadC Component Of Type IV Pilus; Type II Secretion System Protein F Domain; Putative Tight Adherence TadC-Like Transmembrane Protein; TadC Subunit; Type II Secretion System Protein F Domain Protein; Components Of Type IV Pilus TadC; Pilus Assemble Protein; Tight Adherence TadC-Related Transmembrane Protein; Von Willebrand Factor Type A; Component Of Type IV Pilus; Type II Secretion System Integral Membrane Subunit; Component Of Pilus Protein; Secretion System Protein TadC; Tyrosine Phenol-Lyase; Fimbriae-Related Membrane Protein; Components Of Type IV Pilus

Number of amino acids: Translated: 320; Mature: 320

Protein sequence:

>320_residues
MDFLIGLFGQFFDDPQHVEWAIYSVAAIAGVTLAISISYLISGVYSPIRKRLKSLNAAEGTKVTHDVTGTLEHGMGEMAK
KPFLNFSNHETRRLLIHAGFHSENALAVFNASRLLLILLGFVISLVILNLFPEISGIWTIYIFCLFIGGAFIVPSMVLQS
LANRRMRQLRVGFPDALDLLVVCCEAGLGLMAAMQRVARELAFSHPSLASELDLVCSKVRAGLTIKVALQEFTDRTGLED
IKGLNSAISQSMRLGTGIAETLRVFSDEYRDKRLQAAEEQAAKLAVKMIFPMMCCIWPSFFIVAVGPAVLKVMKVWGQAF

Sequences:

>Translated_320_residues
MDFLIGLFGQFFDDPQHVEWAIYSVAAIAGVTLAISISYLISGVYSPIRKRLKSLNAAEGTKVTHDVTGTLEHGMGEMAK
KPFLNFSNHETRRLLIHAGFHSENALAVFNASRLLLILLGFVISLVILNLFPEISGIWTIYIFCLFIGGAFIVPSMVLQS
LANRRMRQLRVGFPDALDLLVVCCEAGLGLMAAMQRVARELAFSHPSLASELDLVCSKVRAGLTIKVALQEFTDRTGLED
IKGLNSAISQSMRLGTGIAETLRVFSDEYRDKRLQAAEEQAAKLAVKMIFPMMCCIWPSFFIVAVGPAVLKVMKVWGQAF
>Mature_320_residues
MDFLIGLFGQFFDDPQHVEWAIYSVAAIAGVTLAISISYLISGVYSPIRKRLKSLNAAEGTKVTHDVTGTLEHGMGEMAK
KPFLNFSNHETRRLLIHAGFHSENALAVFNASRLLLILLGFVISLVILNLFPEISGIWTIYIFCLFIGGAFIVPSMVLQS
LANRRMRQLRVGFPDALDLLVVCCEAGLGLMAAMQRVARELAFSHPSLASELDLVCSKVRAGLTIKVALQEFTDRTGLED
IKGLNSAISQSMRLGTGIAETLRVFSDEYRDKRLQAAEEQAAKLAVKMIFPMMCCIWPSFFIVAVGPAVLKVMKVWGQAF

Specific function: Unknown

COG id: COG2064

COG function: function code NU; Flp pilus assembly protein TadC

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35262; Mature: 35262

Theoretical pI: Translated: 8.38; Mature: 8.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFLIGLFGQFFDDPQHVEWAIYSVAAIAGVTLAISISYLISGVYSPIRKRLKSLNAAEG
CCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
TKVTHDVTGTLEHGMGEMAKKPFLNFSNHETRRLLIHAGFHSENALAVFNASRLLLILLG
CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHEEEEEECCCCCCCEEEECHHHHHHHHHH
FVISLVILNLFPEISGIWTIYIFCLFIGGAFIVPSMVLQSLANRRMRQLRVGFPDALDLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
VVCCEAGLGLMAAMQRVARELAFSHPSLASELDLVCSKVRAGLTIKVALQEFTDRTGLED
HHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCEEEHHHHHHHCCCCHHH
IKGLNSAISQSMRLGTGIAETLRVFSDEYRDKRLQAAEEQAAKLAVKMIFPMMCCIWPSF
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FIVAVGPAVLKVMKVWGQAF
HHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDFLIGLFGQFFDDPQHVEWAIYSVAAIAGVTLAISISYLISGVYSPIRKRLKSLNAAEG
CCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
TKVTHDVTGTLEHGMGEMAKKPFLNFSNHETRRLLIHAGFHSENALAVFNASRLLLILLG
CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHEEEEEECCCCCCCEEEECHHHHHHHHHH
FVISLVILNLFPEISGIWTIYIFCLFIGGAFIVPSMVLQSLANRRMRQLRVGFPDALDLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
VVCCEAGLGLMAAMQRVARELAFSHPSLASELDLVCSKVRAGLTIKVALQEFTDRTGLED
HHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCEEEHHHHHHHCCCCHHH
IKGLNSAISQSMRLGTGIAETLRVFSDEYRDKRLQAAEEQAAKLAVKMIFPMMCCIWPSF
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FIVAVGPAVLKVMKVWGQAF
HHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA