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The map label for this gene is 167624198

Identifier: 167624198

GI number: 167624198

Start: 2757463

End: 2758440

Strand: Reverse

Name: 167624198

Synonym: Shal_2274

Alternate gene names: NA

Gene position: 2758440-2757463 (Counterclockwise)

Preceding gene: 167624199

Following gene: 167624197

Centisome position: 52.77

GC content: 43.56

Gene sequence:

>978_bases
ATGTTTTCTAACCAAGTTATCTTCCTAGGACTGGTTTTTGTTGCGGTGCTTTTTTTATCACAAGCCCTGTTTCTACCAGT
CTATAGCCCCCAAAGAGCAAACAGTGCTTTGGTACGCAAGCGCCTCAAAAAGCTTTCAGAAGCATCAGGCGATATAACTT
ATGAGACATCATTACTGCGTAAGAGCCGCTTAGGAAAACTTGGACCCATTGGGCGCTGGTTAGAGCGCTTTCAGTTGATA
GAAAACTTAAGTTATCGCCTAGAATTAGCAGACTACAAGCTCATGGGCCACCAATTCATTTTTCTGGCTCTCTTTTCGGC
ATCGATAGTCGCTTCGGTGGTGTGGTTCTATTTGGGCGAACAGATCGCTGCCGGATTTATGTTTGTGGTCACACTATTTA
TCTTTAACTTCAAGCTAAATCGCGATACGGCAAAACGCATGGAAAAGATTGAGGAGAGCTTTCCGGATGCTTTGGATGTG
TTGAGGCGAGCACTGCAAGCGGGTTACTCCTTTTCCGATGCCATTAAGTTAGTGACTGAAGAGATGGAGGGGCCGCTTGC
TAAGGAATTTAGTTTAATGTTCGCTAACATTAACTACAGTAAAGATACGAAAAGAGCACTTTTGGGTTTTATTGAACGAG
TTCCTAGTGTATCTGCGATGGCATTCGCGAGTGCTGTAATGGTACAAAAAGAAACGGGTGGTAATTTAGCCGAAAATATC
AATAACTTGGCAAGAGTCATTCGATTACGCTTTACGTTCAGGCGAAGAGTGAGAACGCTTTCTGCTGAGGGACGGCTTTC
AGCCTGGATCCTTATCTTGCTGCCATTTGTGTTATTTGCCGTGATCTATATTCAAACACCTGGTTATGTTGGTGAGTTAA
CGGGGACTGAAGAGGGCAATCAACTGCTTATTTGGGGAGCTATCGGTATGTTTGTCGGTGGCATGTGGATTAGTAAGTTA
ATAAGGATAGATATGTAA

Upstream 100 bases:

>100_bases
TACCTGGCTTCCATGCGAAGTTAAAGCAACACGGTATTGAACTTCCATATCATCTTTTCAACTGTGGCGATCCATTTGCT
GAATTTTAGGGAGCGTAGAC

Downstream 100 bases:

>100_bases
TATGGATTTCCTAATTGGTTTATTTGGTCAGTTTTTTGATGATCCCCAACACGTTGAGTGGGCGATATATTCTGTTGCCG
CAATTGCTGGGGTCACTCTT

Product: type II secretion system protein

Products: NA

Alternate protein names: Flp Pilus Assembly Protein TadB; Type II Secretion System F Domain Protein; Pilus Assembly Protein; Type II Secretion System F Domain-Containing Protein; Flp Pilus Assembly Protein; Pilus Assembly Protein TadB; TadB Protein; Type II Secretion System F Domain; Type II/IV Secretion System Protein TadC Subfamily; Type II Secretion System Protein F; Tad Secretion System Pilus Assembly Protein; Secretion System Protein; Type II Secretion System; Flp Pilus Assembly Protein TadC; Integral Membrane Protein; TadB-Like Pilus Assembly Protein; Tad Secretion System Secretion Accessory Protein; Component Of Type IV Pilus; Type II Secretion System Integral Membrane Subunit; Tight Adherence TadB-Like Transmembrane Protein; Secretion System Protein TadB; Tight Adherence TadB-Related Transmembrane Protein; Components Of Type IV Pilus; Bacterial Type II Secretion System Protein F Domain Protein; TadC Family Type II/IV Secretion System Protein; Bacterial Type II Secretion System Protein F Domain

Number of amino acids: Translated: 325; Mature: 325

Protein sequence:

>325_residues
MFSNQVIFLGLVFVAVLFLSQALFLPVYSPQRANSALVRKRLKKLSEASGDITYETSLLRKSRLGKLGPIGRWLERFQLI
ENLSYRLELADYKLMGHQFIFLALFSASIVASVVWFYLGEQIAAGFMFVVTLFIFNFKLNRDTAKRMEKIEESFPDALDV
LRRALQAGYSFSDAIKLVTEEMEGPLAKEFSLMFANINYSKDTKRALLGFIERVPSVSAMAFASAVMVQKETGGNLAENI
NNLARVIRLRFTFRRRVRTLSAEGRLSAWILILLPFVLFAVIYIQTPGYVGELTGTEEGNQLLIWGAIGMFVGGMWISKL
IRIDM

Sequences:

>Translated_325_residues
MFSNQVIFLGLVFVAVLFLSQALFLPVYSPQRANSALVRKRLKKLSEASGDITYETSLLRKSRLGKLGPIGRWLERFQLI
ENLSYRLELADYKLMGHQFIFLALFSASIVASVVWFYLGEQIAAGFMFVVTLFIFNFKLNRDTAKRMEKIEESFPDALDV
LRRALQAGYSFSDAIKLVTEEMEGPLAKEFSLMFANINYSKDTKRALLGFIERVPSVSAMAFASAVMVQKETGGNLAENI
NNLARVIRLRFTFRRRVRTLSAEGRLSAWILILLPFVLFAVIYIQTPGYVGELTGTEEGNQLLIWGAIGMFVGGMWISKL
IRIDM
>Mature_325_residues
MFSNQVIFLGLVFVAVLFLSQALFLPVYSPQRANSALVRKRLKKLSEASGDITYETSLLRKSRLGKLGPIGRWLERFQLI
ENLSYRLELADYKLMGHQFIFLALFSASIVASVVWFYLGEQIAAGFMFVVTLFIFNFKLNRDTAKRMEKIEESFPDALDV
LRRALQAGYSFSDAIKLVTEEMEGPLAKEFSLMFANINYSKDTKRALLGFIERVPSVSAMAFASAVMVQKETGGNLAENI
NNLARVIRLRFTFRRRVRTLSAEGRLSAWILILLPFVLFAVIYIQTPGYVGELTGTEEGNQLLIWGAIGMFVGGMWISKL
IRIDM

Specific function: Unknown

COG id: COG4965

COG function: function code U; Flp pilus assembly protein TadB

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36778; Mature: 36778

Theoretical pI: Translated: 10.28; Mature: 10.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFSNQVIFLGLVFVAVLFLSQALFLPVYSPQRANSALVRKRLKKLSEASGDITYETSLLR
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHH
KSRLGKLGPIGRWLERFQLIENLSYRLELADYKLMGHQFIFLALFSASIVASVVWFYLGE
HHHCCCCCHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QIAAGFMFVVTLFIFNFKLNRDTAKRMEKIEESFPDALDVLRRALQAGYSFSDAIKLVTE
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHH
EMEGPLAKEFSLMFANINYSKDTKRALLGFIERVPSVSAMAFASAVMVQKETGGNLAENI
HHCCCHHHHHHHHEEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHH
NNLARVIRLRFTFRRRVRTLSAEGRLSAWILILLPFVLFAVIYIQTPGYVGELTGTEEGN
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCC
QLLIWGAIGMFVGGMWISKLIRIDM
EEEEEEHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MFSNQVIFLGLVFVAVLFLSQALFLPVYSPQRANSALVRKRLKKLSEASGDITYETSLLR
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHH
KSRLGKLGPIGRWLERFQLIENLSYRLELADYKLMGHQFIFLALFSASIVASVVWFYLGE
HHHCCCCCHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QIAAGFMFVVTLFIFNFKLNRDTAKRMEKIEESFPDALDVLRRALQAGYSFSDAIKLVTE
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHH
EMEGPLAKEFSLMFANINYSKDTKRALLGFIERVPSVSAMAFASAVMVQKETGGNLAENI
HHCCCHHHHHHHHEEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHH
NNLARVIRLRFTFRRRVRTLSAEGRLSAWILILLPFVLFAVIYIQTPGYVGELTGTEEGN
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCC
QLLIWGAIGMFVGGMWISKLIRIDM
EEEEEEHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA