Click here to switch to the map view.

The map label for this gene is hypC [H]

Identifier: 167624192

GI number: 167624192

Start: 2752498

End: 2752746

Strand: Direct

Name: hypC [H]

Synonym: Shal_2268

Alternate gene names: 167624192

Gene position: 2752498-2752746 (Clockwise)

Preceding gene: 167624191

Following gene: 167624193

Centisome position: 52.66

GC content: 42.17

Gene sequence:

>249_bases
ATGTGTCTTTCGATTCCATCACAAGTTGTTGCACTACATGAAGACGAGCAAGCGGTAACCGTCGATACTATGGGTGTCAA
ACGTAAGGTCAGCAGTCATCTAATGGCCGATGCATTAGAAATAGGTGACTATGTGCTGATCCATATCGGTTTCGTTATGA
ACAAAATTGATAAAGCCGATGCCATGGAAAGTTTGGCTCTATATCGAGAGATTGTTGAAAAACTCGAGCAAGAACAGCAG
GAGTCTTAA

Upstream 100 bases:

>100_bases
TTAATCCGAATGTTGAGCTGATTGAAATATCAGTTAAAGATCCTCAATCATTAGCCAAAGTTGCCGATTGGCTACTGCAA
CATACCGGAGCCTCTGCCTA

Downstream 100 bases:

>100_bases
TGATAGCCCTAACTGAGCTTTACAAAGGATTCAGAGATCCTGAAGTCATTCGCTCTTTAGCGAAAGAGATTGCCACCTAC
GCAAGTTTGATTGACGGTAA

Product: hydrogenase assembly chaperone hypC/hupF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 82; Mature: 82

Protein sequence:

>82_residues
MCLSIPSQVVALHEDEQAVTVDTMGVKRKVSSHLMADALEIGDYVLIHIGFVMNKIDKADAMESLALYREIVEKLEQEQQ
ES

Sequences:

>Translated_82_residues
MCLSIPSQVVALHEDEQAVTVDTMGVKRKVSSHLMADALEIGDYVLIHIGFVMNKIDKADAMESLALYREIVEKLEQEQQ
ES
>Mature_82_residues
MCLSIPSQVVALHEDEQAVTVDTMGVKRKVSSHLMADALEIGDYVLIHIGFVMNKIDKADAMESLALYREIVEKLEQEQQ
ES

Specific function: Required for production of hydrogenase [H]

COG id: COG0298

COG function: function code O; Hydrogenase maturation factor

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hupF/hypC family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019812
- InterPro:   IPR001109 [H]

Pfam domain/function: PF01455 HupF_HypC [H]

EC number: NA

Molecular weight: Translated: 9190; Mature: 9190

Theoretical pI: Translated: 4.34; Mature: 4.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
6.1 %Met     (Translated Protein)
7.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
6.1 %Met     (Mature Protein)
7.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCLSIPSQVVALHEDEQAVTVDTMGVKRKVSSHLMADALEIGDYVLIHIGFVMNKIDKAD
CCCCCCHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
AMESLALYREIVEKLEQEQQES
HHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MCLSIPSQVVALHEDEQAVTVDTMGVKRKVSSHLMADALEIGDYVLIHIGFVMNKIDKAD
CCCCCCHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
AMESLALYREIVEKLEQEQQES
HHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12810954 [H]