Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is 167624183

Identifier: 167624183

GI number: 167624183

Start: 2740982

End: 2741317

Strand: Reverse

Name: 167624183

Synonym: Shal_2259

Alternate gene names: NA

Gene position: 2741317-2740982 (Counterclockwise)

Preceding gene: 167624196

Following gene: 167624180

Centisome position: 52.45

GC content: 42.26

Gene sequence:

>336_bases
ATGAATAGAGCAAAATTCTTCCAACTTCTATTGTCGACGCTATCGATTGTCGGCTGGTCATTGGCAATTTATGCGCTGCT
GATTTTCGACAAAGCACGTCCTGATACCGCTATTGGTTATTTTCAGAGTCAAGGTGCGGCAGTGCGTTTTGAATGGGATC
CAAGCCAAACTGTGTTGCTCGAACATATTATCTGGGTTTGTGCTGGGGTGAGCTTTATCAATCTGGCTTTCAACTTTTAT
ATTTCACGCCATAGTCGTATTGGCTGGTGGGTAAACATTCCTTTGTTATTTTTATGCTCACTAGCGGCAGGGCTCTATAT
TCGATTTGTTGTTTAA

Upstream 100 bases:

>100_bases
ATTACCTGTATAAACGCTTTTCTCAAGTGGAAAGTAGGGTATCTTGGTACCTAAATTGTTATTCTGACGACAATCATGAC
AAAAACTAAGGATAGCTTGC

Downstream 100 bases:

>100_bases
AGCCTAAGGATTGAGTTTTCAAACCTTAGCAGTTTACCTGTTTAGAATTTTCTGTTTGGAGTTTAGATCTTAGAGCCTAG
AAAACTTAGCTAGCGCAACT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 111; Mature: 111

Protein sequence:

>111_residues
MNRAKFFQLLLSTLSIVGWSLAIYALLIFDKARPDTAIGYFQSQGAAVRFEWDPSQTVLLEHIIWVCAGVSFINLAFNFY
ISRHSRIGWWVNIPLLFLCSLAAGLYIRFVV

Sequences:

>Translated_111_residues
MNRAKFFQLLLSTLSIVGWSLAIYALLIFDKARPDTAIGYFQSQGAAVRFEWDPSQTVLLEHIIWVCAGVSFINLAFNFY
ISRHSRIGWWVNIPLLFLCSLAAGLYIRFVV
>Mature_111_residues
MNRAKFFQLLLSTLSIVGWSLAIYALLIFDKARPDTAIGYFQSQGAAVRFEWDPSQTVLLEHIIWVCAGVSFINLAFNFY
ISRHSRIGWWVNIPLLFLCSLAAGLYIRFVV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12689; Mature: 12689

Theoretical pI: Translated: 9.22; Mature: 9.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRAKFFQLLLSTLSIVGWSLAIYALLIFDKARPDTAIGYFQSQGAAVRFEWDPSQTVLL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHEEECCCCEEEEEECCCHHHHH
EHIIWVCAGVSFINLAFNFYISRHSRIGWWVNIPLLFLCSLAAGLYIRFVV
HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHEEEEC
>Mature Secondary Structure
MNRAKFFQLLLSTLSIVGWSLAIYALLIFDKARPDTAIGYFQSQGAAVRFEWDPSQTVLL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHEEECCCCEEEEEECCCHHHHH
EHIIWVCAGVSFINLAFNFYISRHSRIGWWVNIPLLFLCSLAAGLYIRFVV
HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA