The gene/protein map for NC_010334 is currently unavailable.
Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

Click here to switch to the map view.

The map label for this gene is cls [H]

Identifier: 167624148

GI number: 167624148

Start: 2690957

End: 2692414

Strand: Direct

Name: cls [H]

Synonym: Shal_2224

Alternate gene names: 167624148

Gene position: 2690957-2692414 (Clockwise)

Preceding gene: 167624143

Following gene: 167624149

Centisome position: 51.48

GC content: 42.8

Gene sequence:

>1458_bases
ATGTATGAGTTTTACCAGCTGCTAACCATAGCTGGAGTCTTTCTATACTGGTTGATTATTGCTGGTATAAGCATTCGTGT
AGTCGCCAAAAGACGTACCATTGGTGTGTCGCTCGCTTGGTTAATGATTATCTACATCGTTCCCTTAGGTGGCGCTTTCG
CGTACCTACTTTTCGGCGAACTCAATTTAGGAAAAAAAAGAGCTGTACGTGCAGAATTAATGTTCAAACCTTATGGTGAG
TGGTTTAAAAAGCTCTATGAGTATCGTCAGTATCGGCCTCATGTTGCTAGTCTCTATGGTCAGTCAATCAGCGCCATTTG
TGAGAAACAAGTTGGGATCCCTGCATTAGCCGATAACCACTTAACCCTGTGTAGTGAAACCTATGAGATTTTAGATAATC
TAATTGACGACATACACCAAGCAACAGAAACTATATTACTGGAGTTTTATATCTGGCATCCAGGTGGCAGGGCCGATGAC
GTTGCCAAGGCTCTGATACAAAGTGCGGCGCGAGGGGTAAAAATACGCTTATTACTTGACGCTGCAGGGAGTCGGCATTT
TTTCAAAAGCCAGTGGCCAAAACTGATGAAGCAAAGTGGTATACATGTCGTTAGTGCACTACAAGTCTCGCCTTTTCGTA
TGTTCTTTCGACGTTTAGATCTTAGATTACATCGTAAAATTGTTGTCATAGATAATCAAATTGCCTACACAGGTTCCATG
AATTTGGTTGACCCGGAGTTTTTTAATCAAGATGCGGGAGTTGGCCAATGGATTGATGTTATGGTGCGGATCACTGGCAC
CTCTGTACCCGTACTTAATAGTATTCACGCATGGGACTGGGAAGTTGAAACCAATGAACGTTTCCTTCCAGAACAACCTA
AATGCCTGTCTCATGAAGACAGTGAAATTACCGATTTAGTACAAGTTATCCCATCAGGCCCCGGCATGCGTGAAGAGGTT
ATTCACCGAGTGCTACTCCAAAGTATTTATCAGGCACAAAAAAGTATCGTTATAACAACGCCCTATTTTGTACCCAGTGA
TAATCTCCACATGGCATTAATTATCGCCGCGCAGCGTAATGTCACGGTCGATATTATCGTTCCTGATAAAAATGACTCAT
TGATGGTTGAGTGGGCAAGCCGCGCCTTTTTTAGTGAGCTGTTAGAAGCCGGCGTTAACATACATAGATTTAAAGGTGGC
CTACTGCATACCAAGTCCGTCGTTATCGATAGTAATCATTGTTTAATCGGCACGGTTAACTGGGATATGCGTAGTCTATG
GCTTAACTTTGAAGTTACCCTTGCTGTCGATAATCTAGGGTTTACTCAAAAACTTGAAACCGTACAGCAAGATTACCTTA
AAAATACAGTCATGATCTCACCAGAGGAATGGAAAAAGCGACCTTTAGCCAGCCGTGCAGCAGAGCGAGTCTTCTATCTA
TTTAGCCCGTTACTGTAA

Upstream 100 bases:

>100_bases
TCACATGATCATTCTATATAGGGATTATTCACTCAAGTCCTCTTCAAGAGTATTTGCCACTTGGCTTTGAGAGAGTAAGG
ACAATGTTATCAAACAAAAT

Downstream 100 bases:

>100_bases
CTTTTGCGATCACTTTATTCATTGGCTTGATGAACGTATTAATGCGTTCATCAAGCAGTATTTCCCATTAATCTTGAATT
GTTTTTTGGTAACCTATAAA

Product: cardiolipin synthetase

Products: NA

Alternate protein names: CL synthase [H]

Number of amino acids: Translated: 485; Mature: 485

Protein sequence:

>485_residues
MYEFYQLLTIAGVFLYWLIIAGISIRVVAKRRTIGVSLAWLMIIYIVPLGGAFAYLLFGELNLGKKRAVRAELMFKPYGE
WFKKLYEYRQYRPHVASLYGQSISAICEKQVGIPALADNHLTLCSETYEILDNLIDDIHQATETILLEFYIWHPGGRADD
VAKALIQSAARGVKIRLLLDAAGSRHFFKSQWPKLMKQSGIHVVSALQVSPFRMFFRRLDLRLHRKIVVIDNQIAYTGSM
NLVDPEFFNQDAGVGQWIDVMVRITGTSVPVLNSIHAWDWEVETNERFLPEQPKCLSHEDSEITDLVQVIPSGPGMREEV
IHRVLLQSIYQAQKSIVITTPYFVPSDNLHMALIIAAQRNVTVDIIVPDKNDSLMVEWASRAFFSELLEAGVNIHRFKGG
LLHTKSVVIDSNHCLIGTVNWDMRSLWLNFEVTLAVDNLGFTQKLETVQQDYLKNTVMISPEEWKKRPLASRAAERVFYL
FSPLL

Sequences:

>Translated_485_residues
MYEFYQLLTIAGVFLYWLIIAGISIRVVAKRRTIGVSLAWLMIIYIVPLGGAFAYLLFGELNLGKKRAVRAELMFKPYGE
WFKKLYEYRQYRPHVASLYGQSISAICEKQVGIPALADNHLTLCSETYEILDNLIDDIHQATETILLEFYIWHPGGRADD
VAKALIQSAARGVKIRLLLDAAGSRHFFKSQWPKLMKQSGIHVVSALQVSPFRMFFRRLDLRLHRKIVVIDNQIAYTGSM
NLVDPEFFNQDAGVGQWIDVMVRITGTSVPVLNSIHAWDWEVETNERFLPEQPKCLSHEDSEITDLVQVIPSGPGMREEV
IHRVLLQSIYQAQKSIVITTPYFVPSDNLHMALIIAAQRNVTVDIIVPDKNDSLMVEWASRAFFSELLEAGVNIHRFKGG
LLHTKSVVIDSNHCLIGTVNWDMRSLWLNFEVTLAVDNLGFTQKLETVQQDYLKNTVMISPEEWKKRPLASRAAERVFYL
FSPLL
>Mature_485_residues
MYEFYQLLTIAGVFLYWLIIAGISIRVVAKRRTIGVSLAWLMIIYIVPLGGAFAYLLFGELNLGKKRAVRAELMFKPYGE
WFKKLYEYRQYRPHVASLYGQSISAICEKQVGIPALADNHLTLCSETYEILDNLIDDIHQATETILLEFYIWHPGGRADD
VAKALIQSAARGVKIRLLLDAAGSRHFFKSQWPKLMKQSGIHVVSALQVSPFRMFFRRLDLRLHRKIVVIDNQIAYTGSM
NLVDPEFFNQDAGVGQWIDVMVRITGTSVPVLNSIHAWDWEVETNERFLPEQPKCLSHEDSEITDLVQVIPSGPGMREEV
IHRVLLQSIYQAQKSIVITTPYFVPSDNLHMALIIAAQRNVTVDIIVPDKNDSLMVEWASRAFFSELLEAGVNIHRFKGG
LLHTKSVVIDSNHCLIGTVNWDMRSLWLNFEVTLAVDNLGFTQKLETVQQDYLKNTVMISPEEWKKRPLASRAAERVFYL
FSPLL

Specific function: Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol [H]

COG id: COG1502

COG function: function code I; Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 PLD phosphodiesterase domains [H]

Homologues:

Organism=Escherichia coli, GI1787502, Length=487, Percent_Identity=49.8973305954826, Blast_Score=503, Evalue=1e-143,
Organism=Escherichia coli, GI1787007, Length=337, Percent_Identity=27.5964391691395, Blast_Score=102, Evalue=5e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022924
- InterPro:   IPR001736 [H]

Pfam domain/function: PF00614 PLDc [H]

EC number: 2.7.8.-

Molecular weight: Translated: 55385; Mature: 55385

Theoretical pI: Translated: 7.45; Mature: 7.45

Prosite motif: PS50035 PLD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYEFYQLLTIAGVFLYWLIIAGISIRVVAKRRTIGVSLAWLMIIYIVPLGGAFAYLLFGE
CCHHHHHHHHHHHHHHHHHHCCCEEEEEEECHHCCHHHHHHHHHHHHCCCHHHHHHHHHC
LNLGKKRAVRAELMFKPYGEWFKKLYEYRQYRPHVASLYGQSISAICEKQVGIPALADNH
CCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEECCCC
LTLCSETYEILDNLIDDIHQATETILLEFYIWHPGGRADDVAKALIQSAARGVKIRLLLD
CHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCHHHHHHHHHHHHHCCEEEEEEEE
AAGSRHFFKSQWPKLMKQSGIHVVSALQVSPFRMFFRRLDLRLHRKIVVIDNQIAYTGSM
CCCCCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHCCEEEEEECEEEEECCC
NLVDPEFFNQDAGVGQWIDVMVRITGTSVPVLNSIHAWDWEVETNERFLPEQPKCLSHED
CCCCHHHCCCCCCCCHHEEEEEEECCCCCCHHCCCCCCCEEECCCCCCCCCCCCCCCCCC
SEITDLVQVIPSGPGMREEVIHRVLLQSIYQAQKSIVITTPYFVPSDNLHMALIIAAQRN
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCEEEECCEEECCCCCEEEEEEEECCC
VTVDIIVPDKNDSLMVEWASRAFFSELLEAGVNIHRFKGGLLHTKSVVIDSNHCLIGTVN
EEEEEEEECCCCCEEEHHHHHHHHHHHHHCCCEEEEECCCEEEEEEEEEECCCEEEEEEC
WDMRSLWLNFEVTLAVDNLGFTQKLETVQQDYLKNTVMISPEEWKKRPLASRAAERVFYL
CCEEEEEEEEEEEEEEECCCCHHHHHHHHHHHHCCCEEECCHHHHCCCHHHHHHHHHHHH
FSPLL
HHCCC
>Mature Secondary Structure
MYEFYQLLTIAGVFLYWLIIAGISIRVVAKRRTIGVSLAWLMIIYIVPLGGAFAYLLFGE
CCHHHHHHHHHHHHHHHHHHCCCEEEEEEECHHCCHHHHHHHHHHHHCCCHHHHHHHHHC
LNLGKKRAVRAELMFKPYGEWFKKLYEYRQYRPHVASLYGQSISAICEKQVGIPALADNH
CCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEECCCC
LTLCSETYEILDNLIDDIHQATETILLEFYIWHPGGRADDVAKALIQSAARGVKIRLLLD
CHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCHHHHHHHHHHHHHCCEEEEEEEE
AAGSRHFFKSQWPKLMKQSGIHVVSALQVSPFRMFFRRLDLRLHRKIVVIDNQIAYTGSM
CCCCCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHCCEEEEEECEEEEECCC
NLVDPEFFNQDAGVGQWIDVMVRITGTSVPVLNSIHAWDWEVETNERFLPEQPKCLSHED
CCCCHHHCCCCCCCCHHEEEEEEECCCCCCHHCCCCCCCEEECCCCCCCCCCCCCCCCCC
SEITDLVQVIPSGPGMREEVIHRVLLQSIYQAQKSIVITTPYFVPSDNLHMALIIAAQRN
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCEEEECCEEECCCCCEEEEEEEECCC
VTVDIIVPDKNDSLMVEWASRAFFSELLEAGVNIHRFKGGLLHTKSVVIDSNHCLIGTVN
EEEEEEEECCCCCEEEHHHHHHHHHHHHHCCCEEEEECCCEEEEEEEEEECCCEEEEEEC
WDMRSLWLNFEVTLAVDNLGFTQKLETVQQDYLKNTVMISPEEWKKRPLASRAAERVFYL
CCEEEEEEEEEEEEEEECCCCHHHHHHHHHHHHCCCEEECCHHHHCCCHHHHHHHHHHHH
FSPLL
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Transferring phosphorus-containing groups [C]

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA