Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is 167624145

Identifier: 167624145

GI number: 167624145

Start: 2685930

End: 2687702

Strand: Reverse

Name: 167624145

Synonym: Shal_2221

Alternate gene names: NA

Gene position: 2687702-2685930 (Counterclockwise)

Preceding gene: 167624146

Following gene: 167624144

Centisome position: 51.42

GC content: 42.92

Gene sequence:

>1773_bases
ATGAAAAAAGCCGCACTGCCTTTGGCTATTGCGCTATCTCTTGTAGGCCTAACGGCCTGTCAAAGTCAGCCAACAACAGA
ACAAGTTGCTGTTGAGATCACCGACCAGAATTTAGCATTTAATCAATTCAGTCAAAATTTTATTGATGCGTTATGGATAG
AGTCTCCTACTTGGGCTCTTTACAGTGGTTTTCACAAATATGATGGTGTCTTAAAGGTCCCTAATGCCGAAACTCGTGCA
GCGAGTTTAGCGTTTATTCAAACACAACAGTCGGCGCTAGCTAAGTTTGACCCTAAACTGATGTCGCCAGCAACATTGAC
TGACTATCGCCTCATCGAAAACTTACTTGCTGAAATGAAGTGGAATATTGAAACCTTCAAGTCATGGCAATGGAACCCTG
CAAGTTATAACGTCTCTGGTGGTTTCGCACAGATTATTAATGAAGACTTTGCCCCGTTCAGTGAGCGTTTGCATTCTGTG
TTAGCAAGAATGGAAAATGTGCCAGCTTATTACGCAGCGGCAAGAGAAAATATTCAAAATCCGACCATAGAGCACACACA
GCTCGCGATAATGCAAAATCAAGGTGCTTTCTCTGTTTTTTCTAATGACTTACTGAGCCAAGTTTTAGCATCGAGTCTAA
CCAACGAGGAGAAGGCGCTATTTGCTAATCGCTTCAATAAAGTGACGATGGCGATTAACGAGCATATTGATTGGTTAACG
GCATTAGAGGCTAAGCTTGAGAAAGAGGGCGCAAGAAGCTTCCGTATTGGTGAAAAACTTTATGAGCAGAAGTTTGCCTA
CGATATTCAGGCGGGGATGTCTGGCAAGGCGCTTTACGAAAAAGCGGTAAATGACAAAAATCGTGTACAGGCTGAAATGG
CCAAGATCACCAAGAATATCTGGGGTAAATACTTCGATATCCCTATGCCAAAAGATGACAAAGTTGCAATTAAACAACTG
ATTAATAAGCTTTCTGCAAAACATGTTAAACGCGAAGACTTTGTTGATGAAGTGCGAGCACAGATCCCAGAGCTTATTGA
TTTTGTTAACGAGAAGGATCTGGTTACCTTAGATCCAAATAAGCCGTTAGTGGTTCGTGAAACACCCGCGTATATGCGCG
GCTATGCTGGCGCATCAATCAGTGCACCTGGCCCCTATGAAAAGTCAGGTAATACCTATTATAACGTGACACCACTTGAT
GGAATGAGTTCTGCCTCTGCAGAAAGTTATCTGAGAGAATACAATCACTGGATACTACAGGTACTTAATATCCATGAAGC
TATCCCTGGGCATTACACTCAGCTGGTTTATTCGAATGAATCCCCCAGTCTGATTAAGAGCCTATTTGGTAATGGCGCTA
TGGTCGAAGGCTGGGCGGTGTACACTGAGCGTATGATGCTTGAAGAGGGTTATGGCAACTTTGAGCCAGAGATGTGGTTG
ATGTACTACAAGTGGAACCTGCGTGTTATCGCCAACACCATCCTCGATTACAGCATTCAGGTAAAAGGAATGACTGAAGA
ACAAGCGTTAGAGCTTATGATGAATGAAGCTTTTCAGGAACAAGCGGAAGCGGAAGGTAAATGGCGCCGTGCTACCTTGA
GTCAAGTTCAGTTAACGAATTATTACTCGGGTTATCGTGAGATTTACGATTTCAGAGAAGAGTATAAGGCGCTAAAAGGC
GATGATTTTGACCTAAAGGCATTCCATGAAGAATTCTTAAGTTACGGCAGCGCACCTGTGAAATATATTCGAGAGCTGAT
GCTTAACAAATAA

Upstream 100 bases:

>100_bases
AACTGAGTATAGTTACTGAAAATATATAGAGAACATGATTTACTGGAGCGGATTTTAAAGTGGCATTAGACCACGAGCTA
ACAAATTAAGGGAACACACC

Downstream 100 bases:

>100_bases
AATCTTTTAATAGTTAAATAATAGTCGTTAAATCAGTTTAAATGACAAAAGCTTGGTATAACAGCCGCTCGTAAAAACGA
GCGGCTTTTTTGTACTCCGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 590; Mature: 590

Protein sequence:

>590_residues
MKKAALPLAIALSLVGLTACQSQPTTEQVAVEITDQNLAFNQFSQNFIDALWIESPTWALYSGFHKYDGVLKVPNAETRA
ASLAFIQTQQSALAKFDPKLMSPATLTDYRLIENLLAEMKWNIETFKSWQWNPASYNVSGGFAQIINEDFAPFSERLHSV
LARMENVPAYYAAARENIQNPTIEHTQLAIMQNQGAFSVFSNDLLSQVLASSLTNEEKALFANRFNKVTMAINEHIDWLT
ALEAKLEKEGARSFRIGEKLYEQKFAYDIQAGMSGKALYEKAVNDKNRVQAEMAKITKNIWGKYFDIPMPKDDKVAIKQL
INKLSAKHVKREDFVDEVRAQIPELIDFVNEKDLVTLDPNKPLVVRETPAYMRGYAGASISAPGPYEKSGNTYYNVTPLD
GMSSASAESYLREYNHWILQVLNIHEAIPGHYTQLVYSNESPSLIKSLFGNGAMVEGWAVYTERMMLEEGYGNFEPEMWL
MYYKWNLRVIANTILDYSIQVKGMTEEQALELMMNEAFQEQAEAEGKWRRATLSQVQLTNYYSGYREIYDFREEYKALKG
DDFDLKAFHEEFLSYGSAPVKYIRELMLNK

Sequences:

>Translated_590_residues
MKKAALPLAIALSLVGLTACQSQPTTEQVAVEITDQNLAFNQFSQNFIDALWIESPTWALYSGFHKYDGVLKVPNAETRA
ASLAFIQTQQSALAKFDPKLMSPATLTDYRLIENLLAEMKWNIETFKSWQWNPASYNVSGGFAQIINEDFAPFSERLHSV
LARMENVPAYYAAARENIQNPTIEHTQLAIMQNQGAFSVFSNDLLSQVLASSLTNEEKALFANRFNKVTMAINEHIDWLT
ALEAKLEKEGARSFRIGEKLYEQKFAYDIQAGMSGKALYEKAVNDKNRVQAEMAKITKNIWGKYFDIPMPKDDKVAIKQL
INKLSAKHVKREDFVDEVRAQIPELIDFVNEKDLVTLDPNKPLVVRETPAYMRGYAGASISAPGPYEKSGNTYYNVTPLD
GMSSASAESYLREYNHWILQVLNIHEAIPGHYTQLVYSNESPSLIKSLFGNGAMVEGWAVYTERMMLEEGYGNFEPEMWL
MYYKWNLRVIANTILDYSIQVKGMTEEQALELMMNEAFQEQAEAEGKWRRATLSQVQLTNYYSGYREIYDFREEYKALKG
DDFDLKAFHEEFLSYGSAPVKYIRELMLNK
>Mature_590_residues
MKKAALPLAIALSLVGLTACQSQPTTEQVAVEITDQNLAFNQFSQNFIDALWIESPTWALYSGFHKYDGVLKVPNAETRA
ASLAFIQTQQSALAKFDPKLMSPATLTDYRLIENLLAEMKWNIETFKSWQWNPASYNVSGGFAQIINEDFAPFSERLHSV
LARMENVPAYYAAARENIQNPTIEHTQLAIMQNQGAFSVFSNDLLSQVLASSLTNEEKALFANRFNKVTMAINEHIDWLT
ALEAKLEKEGARSFRIGEKLYEQKFAYDIQAGMSGKALYEKAVNDKNRVQAEMAKITKNIWGKYFDIPMPKDDKVAIKQL
INKLSAKHVKREDFVDEVRAQIPELIDFVNEKDLVTLDPNKPLVVRETPAYMRGYAGASISAPGPYEKSGNTYYNVTPLD
GMSSASAESYLREYNHWILQVLNIHEAIPGHYTQLVYSNESPSLIKSLFGNGAMVEGWAVYTERMMLEEGYGNFEPEMWL
MYYKWNLRVIANTILDYSIQVKGMTEEQALELMMNEAFQEQAEAEGKWRRATLSQVQLTNYYSGYREIYDFREEYKALKG
DDFDLKAFHEEFLSYGSAPVKYIRELMLNK

Specific function: Unknown

COG id: COG4805

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 67313; Mature: 67313

Theoretical pI: Translated: 5.01; Mature: 5.01

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKAALPLAIALSLVGLTACQSQPTTEQVAVEITDQNLAFNQFSQNFIDALWIESPTWAL
CCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCHHH
YSGFHKYDGVLKVPNAETRAASLAFIQTQQSALAKFDPKLMSPATLTDYRLIENLLAEMK
HHCHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHC
WNIETFKSWQWNPASYNVSGGFAQIINEDFAPFSERLHSVLARMENVPAYYAAARENIQN
CCHHHHHCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCC
PTIEHTQLAIMQNQGAFSVFSNDLLSQVLASSLTNEEKALFANRFNKVTMAINEHIDWLT
CCCCHHEEEEEECCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHEEHHHHHHHHHH
ALEAKLEKEGARSFRIGEKLYEQKFAYDIQAGMSGKALYEKAVNDKNRVQAEMAKITKNI
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHHHHH
WGKYFDIPMPKDDKVAIKQLINKLSAKHVKREDFVDEVRAQIPELIDFVNEKDLVTLDPN
CCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCC
KPLVVRETPAYMRGYAGASISAPGPYEKSGNTYYNVTPLDGMSSASAESYLREYNHWILQ
CCEEEECCCHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHH
VLNIHEAIPGHYTQLVYSNESPSLIKSLFGNGAMVEGWAVYTERMMLEEGYGNFEPEMWL
HHHHHHHCCCCEEEEEECCCCHHHHHHHHCCCCEEEHHHHHHHHHHHHCCCCCCCCCEEE
MYYKWNLRVIANTILDYSIQVKGMTEEQALELMMNEAFQEQAEAEGKWRRATLSQVQLTN
EEEEECHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
YYSGYREIYDFREEYKALKGDDFDLKAFHEEFLSYGSAPVKYIRELMLNK
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MKKAALPLAIALSLVGLTACQSQPTTEQVAVEITDQNLAFNQFSQNFIDALWIESPTWAL
CCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCHHH
YSGFHKYDGVLKVPNAETRAASLAFIQTQQSALAKFDPKLMSPATLTDYRLIENLLAEMK
HHCHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHC
WNIETFKSWQWNPASYNVSGGFAQIINEDFAPFSERLHSVLARMENVPAYYAAARENIQN
CCHHHHHCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCC
PTIEHTQLAIMQNQGAFSVFSNDLLSQVLASSLTNEEKALFANRFNKVTMAINEHIDWLT
CCCCHHEEEEEECCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHEEHHHHHHHHHH
ALEAKLEKEGARSFRIGEKLYEQKFAYDIQAGMSGKALYEKAVNDKNRVQAEMAKITKNI
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHHHHH
WGKYFDIPMPKDDKVAIKQLINKLSAKHVKREDFVDEVRAQIPELIDFVNEKDLVTLDPN
CCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCC
KPLVVRETPAYMRGYAGASISAPGPYEKSGNTYYNVTPLDGMSSASAESYLREYNHWILQ
CCEEEECCCHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHH
VLNIHEAIPGHYTQLVYSNESPSLIKSLFGNGAMVEGWAVYTERMMLEEGYGNFEPEMWL
HHHHHHHCCCCEEEEEECCCCHHHHHHHHCCCCEEEHHHHHHHHHHHHCCCCCCCCCEEE
MYYKWNLRVIANTILDYSIQVKGMTEEQALELMMNEAFQEQAEAEGKWRRATLSQVQLTN
EEEEECHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
YYSGYREIYDFREEYKALKGDDFDLKAFHEEFLSYGSAPVKYIRELMLNK
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA