Click here to switch to the map view.

The map label for this gene is uspE [H]

Identifier: 167624130

GI number: 167624130

Start: 2669486

End: 2670418

Strand: Direct

Name: uspE [H]

Synonym: Shal_2206

Alternate gene names: 167624130

Gene position: 2669486-2670418 (Clockwise)

Preceding gene: 167624129

Following gene: 167624131

Centisome position: 51.07

GC content: 44.05

Gene sequence:

>933_bases
ATGATGGACTATAAAAAACTCCTTGTGGTTGTTGATCCTACGACAGATAAGCAAACGGCTCTTGCCAGAGCCGTAGAATT
AGCGTCAAAAAACCAAGCTGAAATTACTGTATTTTTATCTATTTTCGACTTCTCCTATGAGATGACCTCTATTCTTTCTG
GCCAAGAACGCGAATCAATGCGTGAAGGTGTTGTAAATCAACGCAAGGCTTGGCTTGAAGATGTCGTTGCCCCCTACCGT
AAAGATGGTTTAACCATAAACTTAGATGTGATTTGGCATAACCGTCCGTTTGAAAGCATCATTAAACACGCTATCGATGG
TGAGTATGATCTTATCGTCAAAGGCACTCACGAACATGATAAGCTCAAATCGGTTATTTTTACGCCGACAGATTGGCACT
TGATGCGTAAGGCGCCAATACCTGTACTACTCGTTAAAGCGCAAGACTGGCCAGTTGCAGGCAAGATTGTTTGCGCAGTA
AACGTAAGCGCTGAAGATAATGCTAACGAGTCCCTCAACGGTAAGATTATCTCTCACGCTAAGAAGCTCGCCGAGCAGTT
TGACGCTCAAGTGCACCTCGTTAATGCTTACCCTGGTACGCCCGTTAACTTGGCTATCGAACTCCCCGACTTTGATGCTC
ATACTTATAGCGAAACCATACGATTACAGCATGAGGAGCGGATCAGTTATCTTGCAAATGCTTATGGGATCTCGCCAGAC
TTCTGCCATGTTATGGAAGGCCTACCAGAAGATGTTATCCCTGACTTAGCAACGAGTTTAGATGCAGAGCTAGTCATATT
GGGAACCATTGGTCGAACCGGAATTTCCGCAGCCTTAATAGGCAATACTGCTGAACATGTTATCGATAGTATCAACTGCG
ACCTACTTGCGATTAAGCCTGATGGCTATAAATCACCATTAGAAGAGGTATAA

Upstream 100 bases:

>100_bases
GCAAGGTAGAACATTTACGACAATCGCTTGATCTAAAACAATATAAAATCATCCTATTCGTGCAAGATAAAACTAAACGA
TATTGGATAAGGAAAACGTT

Downstream 100 bases:

>100_bases
CCGCTTTCTAAGCTTTACCAAAAGCTTTTAAGCTGGAATAATACGCGCCCTGAACATTTGTGTACTAGGCGCGTTTTTTT
ATGTCCGAAGAATTAACTCC

Product: universal stress protein UspE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 310; Mature: 310

Protein sequence:

>310_residues
MMDYKKLLVVVDPTTDKQTALARAVELASKNQAEITVFLSIFDFSYEMTSILSGQERESMREGVVNQRKAWLEDVVAPYR
KDGLTINLDVIWHNRPFESIIKHAIDGEYDLIVKGTHEHDKLKSVIFTPTDWHLMRKAPIPVLLVKAQDWPVAGKIVCAV
NVSAEDNANESLNGKIISHAKKLAEQFDAQVHLVNAYPGTPVNLAIELPDFDAHTYSETIRLQHEERISYLANAYGISPD
FCHVMEGLPEDVIPDLATSLDAELVILGTIGRTGISAALIGNTAEHVIDSINCDLLAIKPDGYKSPLEEV

Sequences:

>Translated_310_residues
MMDYKKLLVVVDPTTDKQTALARAVELASKNQAEITVFLSIFDFSYEMTSILSGQERESMREGVVNQRKAWLEDVVAPYR
KDGLTINLDVIWHNRPFESIIKHAIDGEYDLIVKGTHEHDKLKSVIFTPTDWHLMRKAPIPVLLVKAQDWPVAGKIVCAV
NVSAEDNANESLNGKIISHAKKLAEQFDAQVHLVNAYPGTPVNLAIELPDFDAHTYSETIRLQHEERISYLANAYGISPD
FCHVMEGLPEDVIPDLATSLDAELVILGTIGRTGISAALIGNTAEHVIDSINCDLLAIKPDGYKSPLEEV
>Mature_310_residues
MMDYKKLLVVVDPTTDKQTALARAVELASKNQAEITVFLSIFDFSYEMTSILSGQERESMREGVVNQRKAWLEDVVAPYR
KDGLTINLDVIWHNRPFESIIKHAIDGEYDLIVKGTHEHDKLKSVIFTPTDWHLMRKAPIPVLLVKAQDWPVAGKIVCAV
NVSAEDNANESLNGKIISHAKKLAEQFDAQVHLVNAYPGTPVNLAIELPDFDAHTYSETIRLQHEERISYLANAYGISPD
FCHVMEGLPEDVIPDLATSLDAELVILGTIGRTGISAALIGNTAEHVIDSINCDLLAIKPDGYKSPLEEV

Specific function: Required for resistance to DNA-damaging agents [H]

COG id: COG0589

COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the universal stress protein A family [H]

Homologues:

Organism=Escherichia coli, GI1787594, Length=309, Percent_Identity=52.7508090614887, Blast_Score=346, Evalue=1e-96,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014729
- InterPro:   IPR006016 [H]

Pfam domain/function: PF00582 Usp [H]

EC number: NA

Molecular weight: Translated: 34411; Mature: 34411

Theoretical pI: Translated: 4.74; Mature: 4.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMDYKKLLVVVDPTTDKQTALARAVELASKNQAEITVFLSIFDFSYEMTSILSGQERESM
CCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEEEEEECCCHHHHHHHCCCHHHHH
REGVVNQRKAWLEDVVAPYRKDGLTINLDVIWHNRPFESIIKHAIDGEYDLIVKGTHEHD
HHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEECCCCHHHHHHHHCCCCEEEEEECCCCHH
KLKSVIFTPTDWHLMRKAPIPVLLVKAQDWPVAGKIVCAVNVSAEDNANESLNGKIISHA
HHHEEEECCCCCCEEECCCCCEEEEEECCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHH
KKLAEQFDAQVHLVNAYPGTPVNLAIELPDFDAHTYSETIRLQHEERISYLANAYGISPD
HHHHHHCCCEEEEEECCCCCCEEEEEECCCCCCHHHHHHHEECHHHHHHHHHHHCCCCHH
FCHVMEGLPEDVIPDLATSLDAELVILGTIGRTGISAALIGNTAEHVIDSINCDLLAIKP
HHHHHHCCCHHHHHHHHHCCCCCEEEEECCCCCCCEEEEECCCHHHHHHHCCCCEEEECC
DGYKSPLEEV
CCCCCCHHCC
>Mature Secondary Structure
MMDYKKLLVVVDPTTDKQTALARAVELASKNQAEITVFLSIFDFSYEMTSILSGQERESM
CCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEEEEEECCCHHHHHHHCCCHHHHH
REGVVNQRKAWLEDVVAPYRKDGLTINLDVIWHNRPFESIIKHAIDGEYDLIVKGTHEHD
HHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEECCCCHHHHHHHHCCCCEEEEEECCCCHH
KLKSVIFTPTDWHLMRKAPIPVLLVKAQDWPVAGKIVCAVNVSAEDNANESLNGKIISHA
HHHEEEECCCCCCEEECCCCCEEEEEECCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHH
KKLAEQFDAQVHLVNAYPGTPVNLAIELPDFDAHTYSETIRLQHEERISYLANAYGISPD
HHHHHHCCCEEEEEECCCCCCEEEEEECCCCCCHHHHHHHEECHHHHHHHHHHHCCCCHH
FCHVMEGLPEDVIPDLATSLDAELVILGTIGRTGISAALIGNTAEHVIDSINCDLLAIKP
HHHHHHCCCHHHHHHHHHCCCCCEEEEECCCCCCCEEEEECCCHHHHHHHCCCCEEEECC
DGYKSPLEEV
CCCCCCHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]